Release 56
(Apr 24, 2025)

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  1. Fan B, Onteru SK, Nikkila MT, Stalder KJ, Rothschild MF (2009) "The COL9A1 gene is associated with longissimus dorsi muscle area in the pig.", Animal genetics, 2009 40(5): 788 [ List Data ][ See Abstract ]
  2. Fan B, Onteru SK, Mote BE, Serenius T, Stalder KJ, Rothschild MF (2009) "Large-scale association study for structural soundness and leg locomotion traits in the pig", Genetics, Selection, Evolution : GSE, 2009 41: 14 [ List Data ][ See Abstract ]
  3. Fan B, Onteru S K, Nikkilä MT M T, Stalder K J, Rothschild M F (2009) "Identification of genetic markers associated with fatness and leg weakness traits in the pig", Animal genetics, 2009 40(6): 967-70 [ List Data ][ See Abstract ]
  4. Sironen A, Uimari P, Nagy S, Paku S, Andersson M, Vilkki J (2010) "Knobbed acrosome defect is associated with a region containing the genes STK17b and HECW2 on porcine chromosome 15", BMC Genomics, 2010 11:699 [ List Data ][ See Abstract ]
  5. Ramos AM, Duijvesteijn N, Knol EF, Merks JW, Bovenhuis H, Crooijmans RP, Groenen MA, Harlizius B (2011) "The distal end of porcine chromosome 6p is involved in the regulation of skatole levels in boars", BMC genetics, 2011 12:35 [ List Data ][ See Abstract ]
  6. Onteru SK, Fan B, Nikkilä MT, Garrick DJ, Stalder KJ, Rothschild MF (2011) "Whole-genome association analyses for lifetime reproductive traits in the pig.", Journal of animal science, 2011 89(4): 988-95 [ List Data ][ See Abstract ]
  7. Fan B, Onteru SK, Du ZQ, Garrick DJ, Stalder KJ, Rothschild MF (2011) "Genome-wide association study identifies Loci for body composition and structural soundness traits in pigs.", PloS One, 2011 6(2): e14726 [ List Data ][ See Abstract ]
  8. Kyung-Tai Lee, Mi-Jeong Byun, Kyung-Soo Kang, Eung-Woo Park, Seung-Hwan Lee, Seoae Cho, HyoYoung Kim, Kyu-Won Kim, TaeHeon Lee, Jong-Eun Park, WonCheoul Park, DongHyun Shin, Hong-Seog Park, Jin-Tae Jeon, Bong-Hwan Choi, Gul-Won Jang, Sang-Haeng Choi, Dae-Won Kim, Dajeong Lim, Hae-Suk Park, Mi-Rim Park, Jurg Ott, Lawrence B. Schook, Tae-Hun Kim mail, Heebal Kim (2011) "Neuronal genes for subcutaneous fat thickness in human and pig are identified by local genomic sequencing and combined SNP association study.", PloS one, 2011 6(2): e16356 [ List Data ][ See Abstract ]
  9. Yoo CK, Cho IC, Lee JB, Jung EJ, Lim HT, Han SH, Lee SS, Ko MS, Kang T, Hwang JH, Park YS, Park HB. (2012) "QTL analysis of clinical-chemical traits in an F2 intercross between Landrace and Korean native pigs", Physiol Genomics, 2012 Apr 10. [Epub ahead of print] [ List Data ][ See Abstract ]
  10. Onteru SK, Fan B, Du ZQ, Garrick DJ, Stalder KJ, Rothschild MF (2012) "A whole-genome association study for pig reproductive traits.", Animal genetics, 2012 43(1): 18-26 [ List Data ][ See Abstract ]
  11. Coster A, Madsen O, Heuven HC, Dibbits B, Groenen MA, van Arendonk JA, Bovenhuis H (2012) "The imprinted gene DIO3 is a candidate gene for litter size in pigs.", PloS one, 2012 7(2): e31825 [ List Data ][ See Abstract ]
  12. Ramayo-Caldas Y, Mercade A, Castello A, Yang B, Rodriguez C, Alves E, Diaz I, Ibanez-Escriche N, Noguera JL, Perez-Enciso M, Fer (2012) "Genome-wide association study for intramuscular fatty acid composition in an Iberian × Landrace cross", J Anim Sci, 2012 90(9):2883-93 [ List Data ][ See Abstract ]
  13. Gregersen VR, Conley LN, Sorensen KK, Guldbrandtsen B, Velander IH, Bendixen C (2012) "Genome-wide association scan and phased haplotype construction for quantitative trait loci affecting boar taint in three pig breeds.", BMC genomics, 2012 13(1): 22 [ List Data ][ See Abstract ]
  14. Fontanesi L, Schiavo G, Galimberti G, Calò DG, Scotti E, Martelli PL, Buttazzoni L, Casadio R, Russo V (2012) "A genome wide association study for backfat thickness in Italian Large White pigs highlights new regions affecting fat deposition including neuronal genes", BMC genomics, 2012 13: 583 [ List Data ][ See Abstract ]
  15. Lu X, Fu WX, Luo YR, Ding XD, Zhou JP, Liu Y, Liu JF, Zhang Q (2012) "Genome-wide association study for T lymphocyte subpopulations in swine", BMC genomics, 2012 13: 488 [ List Data ][ See Abstract ]
  16. Chen C, Qiao R, Wei R, Guo Y, Ai H, Ma J, Ren J, Huang L (2012) "A comprehensive survey of copy number variation in 18 diverse pig populations and identification of candidate copy number variable genes associated with complex traits", BMC genomics, 2012 13: 733 [ List Data ][ See Abstract ]
  17. Onteru SK, Gorbach DM, Young JM, Garrick DJ, Dekkers JC, Rothschild MF (2013) "Whole Genome Association Studies of Residual Feed Intake and Related Traits in the Pig.", PloS one, 2013 8 (6): e61756 [ List Data ][ See Abstract ]
  18. Do DN, Strathe AB, Ostersen T, Jensen J, Mark T, Kadarmideen HN (2013) "Genome-wide association study reveals genetic architecture of eating behavior in pigs and its implications for humans obesity by comparative mapping.", PloS one, 2013 8 (8): e71509 [ List Data ][ See Abstract ]
  19. Chen C, Yang B, Zeng Z, Yang H, Liu C, Ren J, Huang L (2013) "Genetic dissection of blood lipid traits by integrating genome-wide association study and gene expression profiling in a porcine model", BMC genomics, 2013 14: 848 [ List Data ][ See Abstract ]
  20. Melo C, Quintanilla R, Gallardo D, Zidi A, Jordana J, Díaz I, Pena R N, Amills M (2013) "Association analysis with lipid traits of 2 candidate genes (LRP12 and TRIB1) mapping to a SSC4 QTL for serum triglyceride concentration in pigs", Journal of animal science, 2013 91(4): 1531-7 [ List Data ][ See Abstract ]
  21. Fowler KE, Pong-Wong R, Bauer J, Clemente EJ, Reitter CP, Affara NA, Waite S, Walling GA, Griffin DK (2013) "Genome wide analysis reveals single nucleotide polymorphisms associated with fatness and putative novel copy number variants in three pig breeds", BMC genomics, 2013 14: 784 [ List Data ][ See Abstract ]
  22. Muñoz M, Rodríguez MC, Alves E, Folch JM, Ibañez-Escriche N, Silió L, Fernández AI (2013) "Genome-wide analysis of porcine backfat and intramuscular fat fatty acid composition using high-density genotyping and expression data", BMC genomics, 2013 14: 845 [ List Data ][ See Abstract ]
  23. Nonneman D, Lents C, Rohrer G, Rempel L, Vallet J (2014) "Genome-wide association with delayed puberty in swine.", Animal genetics, 2014 45(1): 130-2 [ List Data ][ See Abstract ]
  24. Duijvesteijn N, Knol E F, Bijma P (2014) "Boar taint in entire male pigs: A genomewide association study for direct and indirect genetic effects on androstenone", Journal of animal science, 2014 92(10): 4319-28 [ List Data ][ See Abstract ]
  25. Rowe SJ, Karacaören B, de Koning DJ, Lukic B, Hastings-Clark N, Velander I, Haley CS, Archibald AL (2014) "Analysis of the genetics of boar taint reveals both single SNPs and regional effects", BMC genomics, 2014 15: 424 [ List Data ][ See Abstract ]
  26. Duijvesteijn N, Veltmaat JM, Knol EF, Harlizius B (2014) "High-resolution association mapping of number of teats in pigs reveals regions controlling vertebral development", BMC genomics, 2014 15: 542 [ List Data ][ See Abstract ]
  27. Manunza A, Casellas J, Quintanilla R, González-Prendes R, Pena RN, Tibau J, Mercadé A, Castelló A, Aznárez N, Hernández-Sánchez J, Amills M (2014) "A genome-wide association analysis for porcine serum lipid traits reveals the existence of age-specific genetic determinants", BMC genomics, 2014 15: 758 [ List Data ][ See Abstract ]
  28. Lopes MS, Bastiaansen JW, Harlizius B, Knol EF, Bovenhuis H (2014) "A genome-wide association study reveals dominance effects on number of teats in pigs", PloS one, 2014 9(8): e105867 [ List Data ][ See Abstract ]
  29. Sevillano CA, Lopes MS, Harlizius B, Hanenberg EH, Knol EF, Bastiaansen JW (2015) "Genome-wide association study using deregressed breeding values for cryptorchidism and scrotal/inguinal hernia in two pig lines", Genetics, Selection, Evolution : GSE, 2015 47(1): 18 [ List Data ][ See Abstract ]
  30. E Sell-Kubiak, N Duijvesteijn, M S Lopes, L L G Janss, E F Knol, P Bijma, H A Mulder (2015) "Genome-wide association study reveals novel loci for litter size and its variability in a Large White pig population", BMC Genomics, 2015 16 [ List Data ][ See Abstract ]
  31. Chung H Y, Lee K T, Jang G W, Choi J G, Hong J G, Kim T H (2015) "A genome-wide analysis of the ultimate pH in swine", Genetics and molecular research : GMR, 2015 14(4): 15668-82 [ List Data ][ See Abstract ]
  32. Hidalgo A M, Lopes M S, Harlizius B, Bastiaansen J W M (2016) "Genome-wide association study reveals regions associated with gestation length in two pig populations", Animal genetics, 2016 47(2):223-6 [ List Data ][ See Abstract ]
  33. Zhang LC, Yue JW, Pu L, Wang LG, Liu X, Liang J, Yan H, Zhao KB, Li N, Shi HB, Zhang YB, Wang LX (2016) "Genome-wide study refines the quantitative trait locus for number of ribs in a Large White�נMinzhu intercross pig population and reveals a new candidate gene", Molecular genetics and genomics : MGG, 2016 291(5):1885-90 [ List Data ][ See Abstract ]
  34. Guo X, Su G, Christensen OF, Janss L, Lund MS (2016) "Genome-wide association analyses using a Bayesian approach for litter size and piglet mortality in Danish Landrace and Yorkshire pigs", BMC genomics, 2016 17(1): 468 [ List Data ][ See Abstract ]
  35. Ballester M, Revilla M, Puig-Oliveras A, Marchesi J A P, Castelló A, Corominas J, Fernández A I, Folch J M (2016) "Analysis of the porcine APOA2 gene expression in liver, polymorphism identification and association with fatty acid composition traits", Animal genetics, 2016 47(5):552-9 [ List Data ][ See Abstract ]
  36. Zhou L, Ji J, Peng S, Zhang Z, Fang S, Li L, Zhu Y, Huang L, Chen C, Ma J (2016) "A GWA study reveals genetic loci for body conformation traits in Chinese Laiwu pigs and its implications for human BMI", Mammalian genome , 2016 27(11-12):610-621 [ List Data ][ See Abstract ]
  37. Ponsuksili S, Reyer H, Trakooljul N, Murani E, Wimmers K (2016) "Single- and Bayesian Multi-Marker Genome-Wide Association for Haematological Parameters in Pigs", PloS one, 2016 11(7): e0159212 [ List Data ][ See Abstract ]
  38. Paulina G. Eusebi, Rayner Gonz�lez-Prendes, Raquel Quintanilla, Joan Tibau, Taina Figueiredo Cardoso, Alex Clop, Marcel Amills (2017) "A genome-wide association analysis for carcass traits in a commercial Duroc pig population", Animal Genetics, 2017 48(4):466-469. [ List Data ][ See Abstract ]
  39. Le TH, Christensen OF, Nielsen B, Sahana G (2017) "Genome-wide association study for conformation traits in three Danish pig breeds", Genetics, Selection, Evolution : GSE, 2017 49(1): 12 [ List Data ][ See Abstract ]
  40. van Son M, Enger EG, Grove H, Ros-Freixedes R, Kent MP, Lien S, Grindflek E (2017) "Genome-wide association study confirm major QTL for backfat fatty acid composition on SSC14 in Duroc pigs", BMC genomics, 2017 18(1):369 [ List Data ][ See Abstract ]
  41. Reyer H, Shirali M, Ponsuksili S, Murani E, Varley PF, Jensen J, Wimmers K (2017) "Exploring the genetics of feed efficiency and feeding behaviour traits in a pig line highly selected for performance characteristics", Molecular genetics and genomics : MGG, 2017 292(5):1001-1011 [ List Data ][ See Abstract ]
  42. Wu P, Yang Q, Wang K, Zhou J, Ma J, Tang Q, Jin L, Xiao W, Jiang A, Jiang Y, Zhu L, Li X, Tang G (2018) "Single step genome-wide association studies based on genotyping by sequence data reveals novel loci for the litter traits of domestic pigs", Genomics, 2018 110(3):171-179 [ List Data ][ See Abstract ]
  43. Won S, Jung J, Park E, Kim H (2018) "Identification of genes related to intramuscular fat content of pigs using genome-wide association study", Asian-Australasian journal of animal sciences, 2018 31(2): 157-162 [ List Data ][ See Abstract ]
  44. Uzzaman MR, Park JE, Lee KT, Cho ES, Choi BH, Kim TH (2018) "Whole-genome association and genome partitioning revealed variants and explained heritability for total number of teats in a Yorkshire pig population", Asian-Australasian journal of animal sciences, 2018 31(4): 473-479 [ List Data ][ See Abstract ]
  45. Grindflek E, Hansen M H S, Lien S, van Son M (2018) "Genome-wide association study reveals a QTL and strong candidate genes for umbilical hernia in pigs on SSC14", BMC genomics, 2018 19(1): 412 [ List Data ][ See Abstract ]
  46. Wang H, Wu S, Wu J, Sun S, Wu S, Bao W (2018) "Association analysis of the SNP (rs345476947) in the FUT2 gene with the production and reproductive traits in pigs", Genes & genomics, 2018 40(2): 199-206 [ List Data ][ See Abstract ]
  47. González-Prendes R, Quintanilla R, Cánovas A, Manunza A, Figueiredo Cardoso T, Jordana J, Noguera JL, Pena RN, Amills M (2018) "Joint QTL mapping and gene expression analysis identify positional candidate genes influencing pork quality traits", Scientific reports, 2018 7: 39830 [ List Data ][ See Abstract ]
  48. Yang Q, Wu P, Wang K, Chen D, Zhou J, Ma J, Li M, Xiao W, Jiang A, Jiang Y, Bai L, Zhu L, Li X, Tang G (2018) "SNPs associated with body weight and backfat thickness in two pig breeds identified by a genome-wide association study", Genomics, 2018 S0888-7543(18)30329-X [ List Data ][ See Abstract ]
  49. Velez-Irizarry D, Casiro S, Daza KR, Bates RO, Raney NE, Steibel JP, Ernst CW (2019) "Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs", BMC genomics, 2019 20(1): 3 [ List Data ][ See Abstract ]
  50. Li X, Ye J, Han X, Qiao R, Li X, Lv G, Wang K (2019) "Whole-genome sequencing identifies potential candidate genes for reproductive traits in pigs", Genomics, 2019 S0888-7543(18)30673-6 [ List Data ][ See Abstract ]
  51. González-Prendes R, Quintanilla R, Mármol-Sánchez E, Pena RN, Ballester M, Cardoso TF, Manunza A, Casellas J, Cánovas Ã, Díaz I, Noguera JL, Castelló A, Mercadé A, Amills M (2019) "Comparing the mRNA expression profile and the genetic determinism of intramuscular fat traits in the porcine gluteus medius and longissimus dorsi muscles", BMC genomics, 2019 20(1): 170 [ List Data ][ See Abstract ]
  52. Stafuzza NB, Silva RMO, Fragomeni BO, Masuda Y, Huang Y, Gray K, Lourenco DAL (2019) "A genome-wide single nucleotide polymorphism and copy number variation analysis for number of piglets born alive", BMC genomics, 2019 20(1): 321 [ List Data ][ See Abstract ]
  53. Ma Y, Zhang S, Zhang K, Fang C, Xie S, Du X, Li X, Ni D, Zhao S (2019) "Genomic Analysis To Identify Signatures of Artificial Selection and Loci Associated with Important Economic Traits in Duroc Pigs", G3 (Genes | Genomics | Genetics), 2019 8(11): 3617-3625 [ List Data ][ See Abstract ]
  54. Crespo-Piazuelo D, Criado-Mesas L, Revilla M, Castelló A, Fernández AI, Folch JM, Ballester M (2019) "Indel detection from Whole Genome Sequencing data and association with lipid metabolism in pigs", PloS one, 2019 14(6): e0218862 [ List Data ][ See Abstract ]
  55. Chen Z, Ye S, Teng J, Diao S, Yuan X, Chen Z, Zhang H, Li J, Zhang Z (2019) "Genome-wide association studies for the number of animals born alive and dead in duroc pigs", Theriogenology, 2019 139: 36-42 [ List Data ][ See Abstract ]
  56. Zhang Z, Chen Z, Ye S, He Y, Huang S, Yuan X, Chen Z, Zhang H, Li J (2019) "Genome-Wide Association Study for Reproductive Traits in a Duroc Pig Population", Animals : an open access journal from MDPI, 2019 9(10) [ List Data ][ See Abstract ]
  57. Gao N, Chen Y, Liu X, Zhao Y, Zhu L, Liu A, Jiang W, Peng X, Zhang C, Tang Z, Li X, Chen Y (2019) "Weighted single-step GWAS identified candidate genes associated with semen traits in a Duroc boar population", BMC Genomics, 2019 20(1): 797 [ List Data ][ See Abstract ]
  58. Mármol-Sánchez E, Quintanilla R, Jordana J, Amills M (2020) "An association analysis for 14 candidate genes mapping to meat quality quantitative trait loci in a Duroc pig population reveals that the ATP1A2 genotype is highly associated with muscle electric conductivity", Animal genetics, 2020 51(1):95-100 [ List Data ][ See Abstract ]
  59. Drag MH, Kogelman LJA, Maribo H, Meinert L, Thomsen PD, Kadarmideen HN (2020) "Characterization of eQTLs associated with androstenone by RNA sequencing in porcine testis", Physiological genomics, 2020 51(10): 488-499 [ List Data ][ See Abstract ]
  60. Zhuang Z, Ding R, Peng L, Wu J, Ye Y, Zhou S, Wang X, Quan J, Zheng E, Cai G, Huang W, Yang J, Wu Z (2020) "Genome-wide Association Analyses Identify Known and Novel Loci for Teat Number in Duroc Pigs Using Single-Locus and Multi-Locus Models", BMC Genomics, 2020 21(1):344 [ List Data ][ See Abstract ]
  61. Zhou S, Ding R, Meng F, Wang X, Zhuang Z, Quan J, Geng Q, Wu J, Zheng E, Wu Z, Yang J, Yang J (2021) "A meta-analysis of genome-wide association studies for average daily gain and lean meat percentage in two Duroc pig populations", BMC genomics, 2021 22(1): 12 [ List Data ][ See Abstract ]
  62. Miao Y, Mei Q, Fu C, Liao M, Liu Y, Xu X, Li X, Zhao S, Xiang T (2021) "Genome-wide association and transcriptome studies identify candidate genes and pathways for feed conversion ratio in pigs", BMC genomics, 2021 22(1): 294 [ List Data ][ See Abstract ]
  63. Zhuang Z, Ding R, Qiu Y, Wu J, Zhou S, Quan J, Zheng E, Li Z, Wu Z, Yang J (2021) "A large-scale genome-wide association analysis reveals QTL and candidate genes for intramuscular fat content in Duroc pigs", Animal Genetics, 2021 52(4):518-522 [ List Data ][ See Abstract ]
  64. Bai X, Yang T, Putz AM, Wang Z, Li C, Fortin F, Harding JCS, Dyck MK; PigGen Canada, Dekkers JCM, Field CJ, Plastow GS (2021) "Investigating the genetic architecture of disease resilience in pigs by genome-wide association studies of complete blood count traits collected from a natural disease challenge model", BMC genomics, 2021 22(1): 535 [ List Data ][ See Abstract ]
  65. Dauben CM, Pröll-Cornelissen MJ, Heuß EM, Appel AK, Henne H, Roth K, Schellander K, Tholen E, Große-Brinkhaus C (2021) "Genome-wide associations for immune traits in two maternal pig lines", BMC Genomics, 2021 22(1):717 [ List Data ][ See Abstract ]
  66. Liu Y, Long H, Feng S, Ma T, Wang M, Niu L, Zhang X, Wang L, Lei Y, Chen Y, Wang Q, Xu X (2021) "Trait correlated expression combined with eQTL and ASE analyses identified novel candidate genes affecting intramuscular fat", BMC Genomics, 2021 22(1): 805 [ List Data ][ See Abstract ]
  67. Ding R, Zhuang Z, Qiu Y, Wang X, Wu J, Zhou S, Ruan D, Xu C, Hong L, Gu T, Zheng E, Cai G, Huang W, Wu Z, Yang J (2022) "A composite strategy of genome-wide association study and copy number variation analysis for carcass traits in a Duroc pig population.", BMC Genomics, 2022 23(1): 590 [ List Data ][ See Abstract ]
  68. Wang H, Wang X, Yan D, Sun H, Chen Q, Li M, Dong X, Pan Y, Lu S (2022) "Genome-wide association study identifying genetic variants associated with carcass backfat thickness, lean percentage and fat percentage in a four-way crossbred pig population using SLAF-seq technology", BMC Genomics, 2022 23(1):594 [ List Data ][ See Abstract ]
  69. Shi L, Wang L, Fang L, Li M, Tian J, Wang L, Zhao F (2022) "Integrating genome-wide association studies and population genomics analysis reveals the genetic architecture of growth and backfat traits in pigs", Frontiers in Genetics, 2022 13: 1078696 [ List Data ][ See Abstract ]
  70. Nosková A, Mehrotra A, Kadri NK, Lloret-Villas A, Neuenschwander S, Hofer A, Pausch H (2023) "Comparison of two multi-trait association testing methods and sequence-based fine mapping of six additive QTL in Swiss Large White pigs", BMC Genomics, 2023 24(1): 192 [ List Data ][ See Abstract ]
  71. Zhong Z, Li G, Xu Z, Zeng H, Teng J, Feng X, Diao S, Gao Y, Li J, Zhang Z (2024) "Evaluating three strategies of genome-wide association analysis for integrating data from multiple populations", Animal Genetics, 2024 55(2):265-276 [ List Data ][ See Abstract ]
  72. Xiang Y, Sun J, Ma G, Dai X, Meng Y, Fu C, Zhang Y, Zhao Q, Li J, Zhang S, Zheng Z, Li X, Fu L, Li K, Qi X (2024) "Integrating Multi-Omics Data to Identify Key Functional Variants Affecting Feed Efficiency in Large White Boars", Genes, 2024 15(8):980 [ List Data ][ See Abstract ]
In addition, there are matches in 6 other species QTLdb:

 

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