Release 56
(Apr 24, 2025)

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  1. Abasht B, Sandford E, Arango J, Settar P, Fulton JE, O'Sullivan NP, Hassen A, Habier D, Fernando RL, Dekkers JCM, Lamont SJ (2009) "Extent and consistency of linkage disequilibrium and identification of DNA markers for production and egg quality traits in commercial layer chicken populations", BMC genomics, 2009 10 Suppl 2: S2 [ List Data ][ See Abstract ]
  2. Biscarini F, Bovenhuis H, van Arendonk JA, Parmentier HK, Jungerius AP, van der Poel JJ (2010) "Across-line SNP association study of innate and adaptive immune response in laying hens", Animal Genetics, 2010 41(1):26-38 [ List Data ][ See Abstract ]
  3. Biscarini F, Bovenhuis H, van der Poel J, Rodenburg TB, Jungerius AP, van Arendonk JA (2010) "Across-line SNP association study for direct and associative effects on feather damage in laying hens", Behav Genet, 2010 40(5):715-27 [ List Data ][ See Abstract ]
  4. Jia X, Nie Q, Lamont SJ, Zhang X (2012) "Variation in sequence and expression of the avian FTO, and association with glucose metabolism, body weight, fatness and body composition in chickens", Int J Obes (Lond), 2012 36(8): 1054-61 [ List Data ][ See Abstract ]
  5. Xie L, Luo C, Zhang C, Zhang R, Tang J, Nie Q, Ma L, Hu X, Li N, Da Y, Zhang X (2012) "Genome-wide association study identified a narrow chromosome 1 region associated with chicken growth traits", PLoS One, 2012 7(2):e30910 [ List Data ][ See Abstract ]
  6. Wragg D, Mwacharo JM, Alcalde JA, Hocking PM, Hanotte O (2012) "Analysis of genome-wide structure, diversity and fine mapping of Mendelian traits in traditional and village chickens", Heredity (Edinb), 2012 109(1):6-18 [ List Data ][ See Abstract ]
  7. Sun Y, Zhao G, Liu R, Zheng M, Hu Y, Wu D, Zhang L, Li P, Wen J (2013) "The identification of 14 new genes for meat quality traits in chicken using a genome-wide association study", BMC genomics, 2013 14: 458 [ List Data ][ See Abstract ]
  8. Luo C, Qu H, Wang J, Wang Y, Ma J, Li C, Yang C, Hu X, Li N, Shu D (2013) "Genetic parameters and genome-wide association study of hyperpigmentation of the visceral peritoneum in chickens", BMC genomics, 2013 14: 334 [ List Data ][ See Abstract ]
  9. Sun Y, Biscarini F, Bovenhuis H, Parmentier H K, van der Poel J J (2013) "Genetic parameters and across-line SNP associations differ for natural antibody isotypes IgM and IgG in laying hens", Animal genetics, 2013 44(4): 413-24 [ List Data ][ See Abstract ]
  10. Sheng Z, Pettersson ME, Hu X, Luo C, Qu H, Shu D, Shen X, Carlborg O, Li N (2013) "Genetic dissection of growth traits in a Chinese indigenous × commercial broiler chicken cross", BMC genomics, 2013 14: 151 [ List Data ][ See Abstract ]
  11. Park MN, Choi JA, Lee KT, Lee HJ, Choi BH, Kim H, Kim TH, Cho S, Lee T (2013) "Genome-wide Association Study of Chicken Plumage Pigmentation", Asian-Australasian Journal of Animal Sciences, 2013 26(11):1523-8 [ List Data ][ See Abstract ]
  12. Liang S S, Ouyang H J, Liu J, Chen B, Nie Q H, Zhang X Q (2015) "Expression of variant transcripts of the potassium channel tetramerization domain-containing 15 (KCTD15) gene and their association with fatness traits in chickens", Domestic animal endocrinology, 2015 50: 65-71 [ List Data ][ See Abstract ]
  13. Sun C, Qu L, Yi G, Yuan J, Duan Z, Shen M, Qu L, Xu G, Wang K, Yang N (2015) "Genome-wide association study revealed a promising region and candidate genes for eggshell quality in an F2 resource population", BMC genomics, 2015 16: 565 [ List Data ][ See Abstract ]
  14. Yi G, Shen M, Yuan J, Sun C, Duan Z, Qu L, Dou T, Ma M, Lu J, Guo J, Chen S, Qu L, Wang K, Yang N (2015) "Genome-wide association study dissects genetic architecture underlying longitudinal egg weights in chickens", BMC genomics, 2015 16(1): 746 [ List Data ][ See Abstract ]
  15. Sun Y, Liu R, Zhao G, Zheng M, Sun Y, Yu X3, Li P, Wen J (2015) "Genome-Wide Linkage Analysis Identifies Loci for Physical Appearance Traits in Chickens", G3 (Genes | Genomics | Genetics), 2015 5(10): 2037-41 [ List Data ][ See Abstract ]
  16. Psifidi A, Fife M, Howell J, Matika O, van Diemen P M, Kuo R, Smith J, Hocking P M, Salmon N, Jones M A, Hume D A, Banos G, Stevens M P, Kaiser P (2016) "The genomic architecture of resistance to Campylobacter jejuni intestinal colonisation in chickens", BMC genomics, 2016 17(1): 293 [ List Data ][ See Abstract ]
  17. Rao Y S, Li J, Zhang R, Lin X R, Xu J G, Xie L, Xu Z Q, Wang L, Gan J K, Xie X J, He J, Zhang X Q (2016) "Copy number variation identification and analysis of the chicken genome using a 60K SNP BeadChip", Poultry science, 2016 95(8): 1750-6 [ List Data ][ See Abstract ]
  18. Xu Z, Ji C, Zhang Y, Zhang Z, Nie Q, Xu J, Zhang D, Zhang X (2016) "Combination analysis of genome-wide association and transcriptome sequencing of residual feed intake in quality chickens", BMC genomics, 2016 17: 594 [ List Data ][ See Abstract ]
  19. Li Z, Zheng M, Abdalla BA, Zhang Z, Xu Z, Ye Q, Xu H, Luo W, Nie Q, Zhang X (2016) "Genome-wide association study of aggressive behaviour in chicken", Scientific reports, 2016 6: 30981 [ List Data ][ See Abstract ]
  20. Shah TM, Patel NV, Patel AB, Upadhyay MR, Mohapatra A, Singh KM, Deshpande SD, Joshi CG (2016) "A genome-wide approach to screen for genetic variants in broilers (Gallus gallus) with divergent feed conversion ratio", Molecular genetics and genomics : MGG, 2016 291(4): 1715-25 [ List Data ][ See Abstract ]
  21. Lien CY, Tixier-Boichard M, Wu SW, Wang WF, Ng CS, Chen CF (2017) "Detection of QTL for traits related to adaptation to sub-optimal climatic conditions in chickens", Genetics, Selection, Evolution : GSE, 2017 49(1): 39 [ List Data ][ See Abstract ]
  22. Yuan J, Chen S, Shi F, Wu G, Liu A, Yang N, Sun C (2017) "Genome-wide association study reveals putative role of gga-miR-15a in controlling feed conversion ratio in layer chickens", BMC genomics, 2017 18(1): 699 [ List Data ][ See Abstract ]
  23. Brandt M, Ahsan M, Honaker CF, Siegel PB, Carlborg Ö (2017) "Imputation-Based Fine-Mapping Suggests That Most QTL in an Outbred Chicken Advanced Intercross Body Weight Line Are Due to Multiple, Linked Loci", G3 (Genes | Genomics | Genetics), 2017 7(1): 119-128 [ List Data ][ See Abstract ]
  24. Pampouille E, Berri C, Boitard S, Hennequet-Antier C, Beauclercq SA, Godet E, Praud C, Jégo Y, Le Bihan-Duval E (2018) "Mapping QTL for white striping in relation to breast muscle yield and meat quality traits in broiler chickens", BMC genomics, 2018 19(1): 202 [ List Data ][ See Abstract ]
  25. Bihan-Duval EL, Hennequet-Antier C, Berri C, Beauclercq SA, Bourin MC, Boulay M, Demeure O, Boitard S (2018) "Identification of genomic regions and candidate genes for chicken meat ultimate pH by combined detection of selection signatures and QTL", BMC genomics, 2018 19(1): 294 [ List Data ][ See Abstract ]
  26. Moreira GCM, Boschiero C, Cesar ASM, Reecy JM, Godoy TF, Trevisoli PA, Cantão ME, Ledur MC, Ibelli AMG, Peixoto JO, Moura ASAMT, Garrick D, Coutinho LL (2018) "A genome-wide association study reveals novel genomic regions and positional candidate genes for fat deposition in broiler chickens", BMC genomics, 2018 19(1): 374 [ List Data ][ See Abstract ]
  27. Huang S, He Y, Ye S, Wang J, Yuan X, Zhang H, Li J, Zhang X, Zhang Z (2018) "Genome-wide association study on chicken carcass traits using sequence data imputed from SNP array", Journal of applied genetics, 2018 59(3):335-344 [ List Data ][ See Abstract ]
  28. Mebratie W, Reyer H, Wimmers K, Bovenhuis H, Jensen J (2019) "Genome wide association study of body weight and feed efficiency traits in a commercial broiler chicken population, a re-visitation", Scientific reports, 2019 9(1): 922 [ List Data ][ See Abstract ]
  29. Wang J, Yuan X, Ye S, Huang S, He Y, Zhang H, Li J, Zhang X, Zhang Z (2019) "Genome wide association study on feed conversion ratio using imputed sequence data in chickens", Asian-Australasian journal of animal sciences, 2019 32(4): 494-500 [ List Data ][ See Abstract ]
  30. Fogelholm J, Inkabi S, Höglund A, Abbey-Lee R, Johnsson M, Jensen P, Henriksen R, Wright D (2019) "Genetical Genomics of Tonic Immobility in the Chicken", Genes, 2019 10(5) [ List Data ][ See Abstract ]
  31. Moreira GCM, Salvian M, Boschiero C, Cesar ASM, Reecy JM, Godoy TF, Ledur MC, Garrick D, Mourão GB, Coutinho LL (2019) "Genome-wide association scan for QTL and their positional candidate genes associated with internal organ traits in chickens", BMC genomics, 2019 20(1): 669 [ List Data ][ See Abstract ]
  32. Fogelholm J1, Henriksen R1, Höglund A1, Huq N1, Johnsson M2,3, Lenz R4, Jensen P1, Wright D (2020) "CREBBP and WDR 24 Identified as Candidate Genes for Quantitative Variation in Red-Brown Plumage Colouration in the Chicken", Scientific reports, 2020 10(1): 1161 [ List Data ][ See Abstract ]
  33. Ye S, Chen ZT, Zheng R, Diao S, Teng J, Yuan X, Zhang H, Chen Z, Zhang X, Li J, Zhang Z (2020) "New Insights From Imputed Whole-Genome Sequence-Based Genome-Wide Association Analysis and Transcriptome Analysis: The Genetic Mechanisms Underlying Residual Feed Intake in Chickens", Frontiers in genetics, 2020 11: 243 [ List Data ][ See Abstract ]
  34. Tarsani E, Kranis A, Maniatis G, Avendano S, Hager-Theodorides AL, Kominakis A (2020) "Deciphering the mode of action and position of genetic variants impacting on egg number in broiler breeders", BMC genomics, 2020 21(1): 512 [ List Data ][ See Abstract ]
  35. Walugembe M, Amuzu-Aweh EN, Botchway PK, Naazie A, Aning G, Wang Y, Saelao P, Kelly T, Gallardo RA, Zhou H, Lamont SJ, Kayang BB, Dekkers JCM (2020) "Genetic Basis of Response of Ghanaian Local Chickens to Infection With a Lentogenic Newcastle Disease Virus", Frontiers in genetics, 2020 11: 739 [ List Data ][ See Abstract ]
  36. Zhang Z, Zhong H, Lin S, Liang L, Ye S, Xu Z, Ji C, Zhang Z, Zhang D, Zhang X (2021) "Polymorphisms of AMY1A gene and their association with growth, carcass traits and feed intake efficiency in chickens", Genomics, 2021 113(2): 583-594 [ List Data ][ See Abstract ]
  37. Fernandes AC, da Silva VH, Goes CP, Moreira GCM, Godoy TF, Ibelli AMG, Peixoto JO, Cantão ME, Ledur MC, de Rezende FM, Coutinho LL (2021) "Genome-wide detection of CNVs and their association with performance traits in broilers", BMC genomics, 2021 22(1): 354 [ List Data ][ See Abstract ]
  38. Zhao X, Nie C, Zhang J, Li X, Zhu T, Guan Z, Chen Y, Wang L, Lv XZ, Yang W, Jia Y, Ning Z, Li H, Qu C, Wang H, Qu L (2021) "Identification of candidate genomic regions for chicken egg number traits based on genome-wide association study", BMC genomics, 2021 22(1): 610 [ List Data ][ See Abstract ]
  39. Yang J, Mao Z, Wang X, Zhuang J, Gong S, Gao Z, Xu G, Yang N, Sun C (2022) "Identification of crucial genes and metabolites regulating the eggshell brownness in chicken", BMC Genomics, 2022 23(1): 761 [ List Data ][ See Abstract ]
  40. Zhang R, Yao F, Cheng X, Yang M, Ning Z (2023) "Identification of candidate genomic regions for egg yolk moisture content based on a genome-wide association study", BMC Genomics, 2023 24(1): 110 [ List Data ][ See Abstract ]
  41. Fan S, Yuan P, Li S, Li H, Zhai B, Li Y, Zhang H, Gu J, Li H, Tian Y, Kang X, Zhang Y, Li G (2023) "Genetic architecture and key regulatory genes of fatty acid composition in Gushi chicken breast muscle determined by GWAS and WGCNA.", BMC Genomics, 2023 24(1): 434 [ List Data ][ See Abstract ]
  42. Cai K, Liu R, Wei L, Wang X, Cui H, Luo N, Wen J, Chang Y, Zhao G (2024) "Genome-wide association analysis identify candidate genes for feed efficiency and growth traits in Wenchang chickens", BMC Genomics, 2024 25(1): 645 [ List Data ][ See Abstract ]
  43. Wang J, Liu J, Lei Q, Liu Z, Han H, Zhang S, Qi C, Liu W, Li D, Li F, Cao D, Zhou Y (2024) "Elucidation of the genetic determination of body weight and size in Chinese local chicken breeds by large-scale genomic analyses", BMC Genomics, 2024 25(1): 296 [ List Data ][ See Abstract ]
In addition, there are matches in 6 other species QTLdb:

 

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