Pig QTL Database

Release 56
(Apr 24, 2025)

Curator: Cari Park
Curated: 2019-01-28
Updated: 2024-04-23

Publication # 30606113 Details

Authors:	Velez-Irizarry D, Casiro S, Daza KR, Bates RO, Raney NE, Steibel JP, Ernst CW (Contact: ernstc@msu.edu)
Affiliation:	Department of Animal Science, Michigan State University, East Lansing, MI, 48824, USA
Title:	Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs
Journal:	BMC Genomics, 20(1): 3 (2019)	DOI: 10.1186/s12864-018-5386-2
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Dressing percentage reported for chromosome(s): Chr.7: QTL:167222. Chr.11: QTL:167224. QTL for Carcass length reported for chromosome(s): Chr.7: QTL:167223. QTL for Number of ribs reported for chromosome(s): Chr.7: QTL:167225. QTL for Cooking yield reported for chromosome(s): Chr.5: QTL:167226. Chr.8: Asso:167255. Chr.15: QTL:167229. QTL for Subcutaneous fat thickness reported for chromosome(s): Chr.1: QTL:167244. Chr.3: Asso:167259. Chr.4: Asso:167252. Chr.5: QTL:167247. Chr.6: QTL:167236, QTL:167237, QTL:167238, QTL:167239, QTL:167240, QTL:167241, QTL:167242, QTL:167243, QTL:167248, QTL:167249, Asso:167257, Asso:167258. Chr.9: QTL:167227. Chr.10: Asso:167256. Chr.12: Asso:167261. QTL for Muscle pH reported for chromosome(s): Chr.15: QTL:167228. QTL for Drip loss reported for chromosome(s): Chr.15: QTL:167230. QTL for Muscle protein percentage reported for chromosome(s): Chr.15: QTL:167231. QTL for Shear force reported for chromosome(s): Chr.2: QTL:167246. Chr.15: QTL:167232. QTL for Longissimus muscle area reported for chromosome(s): Chr.6: QTL:167233. QTL for Juiciness score reported for chromosome(s): Chr.15: QTL:167234. QTL for Tenderness score reported for chromosome(s): Chr.2: QTL:167245. Chr.3: Asso:167260. Chr.5: Asso:167253, Asso:167254. Chr.15: QTL:167235. QTL for Loin weight reported for chromosome(s): Chr.6: QTL:167250. Chr.11: Asso:167251. QTL/association Reported by chromosomes: Chr.1 (1), Chr.2 (2), Chr.3 (2), Chr.4 (1), Chr.5 (4), Chr.6 (14), Chr.7 (3), Chr.8 (1), Chr.9 (1), Chr.10 (1), Chr.11 (2), Chr.12 (1), Chr.15 (7). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Velez-Irizarry D, Casiro S, Daza KR, Bates RO, Raney NE, Steibel JP, Ernst CW (2019). Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs. BMC genomics, 20(1): 3; Curated into QTLdb on 2019-01-28. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=LdDi6P4QuC

Velez-Irizarry D, Casiro S, Daza KR, Bates RO, Raney NE, Steibel JP, Ernst CW (2019). Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs. BMC genomics, 20(1): 3; DOI: https://dx.doi.org/10.1186/s12864-018-5386-2

Publication # 30606113 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: