| QTL Map Information |
|---|
| Chromosome: | 19 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
31.7-31.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs417454260 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | MITF (melanocyte inducing transcription factor) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Australian White sheep. |
| Breeds associated:
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| Design: | Animals were subjected to whole-genome sequencing, and GWAS was performed for hoof color. A total of 171,842 SNPs were used in analysis. |
| Analysis: | A mixed linear model was used. |
| Software: | GATK v4.1.9.0, fastPHASE v1.4, EMMAX, PLINK v1.90, Bcftools, LDblockshow, SPSS v25.0 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Su P, Wu H, Huang Y, Lu X, Yin J, Zhang Q, Lan X |
| Affiliation: | Tianjin Aoqun Animal Husbandry Co., Ltd., Tianjin 301607, China |
| Title: | The Hoof Color of Australian White Sheep Is Associated with Genetic Variation of the MITF Gene |
| Journal: | Animals : an open access journal from MDPI, 2023, 13(20):3218 |
| Links: |
PubMed | Abstract | List all data
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