| QTL Map Information |
|---|
| Chromosome: | 21 |
| QTL Peak Location: | 59.36 (cM) |
| QTL Span: | 59.04-59.67 (cM)
39.1-39.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs420207049 |
| Peak: | |
| Lower, "Significant": | rs409761758 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were Romane x Martinik Black Belly backcross lambs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip, as well as for 160 microsatellites, and analyzed for response to challenge with Haemonchus contortus. A total of 42,469 SNPs were used for analysis. |
| Analysis: | Linkage, association, and joint linkage and association analyses were performed. |
| Software: | QTLMAP, CRIMAP, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sallé G, Jacquiet P, Gruner L, Cortet J, Sauvé C, Prévot F, Grisez C, Bergeaud J P, Schibler L, Tircazes A, François D, Pery C, Bouvier F, Thouly J C, Brunel J C, Legarra A, Elsen J M, Bouix J, Rupp R, Moreno C R |
| Affiliation: | INRA, UR631, Station d'Amélioration Génétique des Animaux, BP 27, F-31326, Castanet-Tolosan, France |
| Title: | A genome scan for QTL affecting resistance to Haemonchus contortus in sheep |
| Journal: | Journal of animal science, 2012, 90(13): 4690-705 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
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| Comments: | After second challenge; GWAS, LDLA |
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