| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | 118.16 (cM) |
| QTL Span: | 118.16-118.16 (cM)
112.7-112.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42856152 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Suggestive |
 |
PostProbInc | 0.9274 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein-Friesian cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for carcass traits. A total of 42,477 SNPs were used for analysis. |
| Analysis: | Single-marker regression and multi-locus Bayesian analysis were performed. |
| Software: | R software |
| Notes: | Significance cutoff used for Bayesian analysis: PP>0.95 significant, PP=0.9-0.95 suggestive |
| Links: | Edit |
| Reference |
|---|
| Authors: | Doran Anthony G, Berry Donagh P, Creevey Christopher J |
| Affiliation: | Teagasc Animal and Bioscience Research Department, Animal & Grassland Research and Innovation Centre, Teagasc, Grange, Dunsany, Co, Meath, Ireland |
| Title: | Whole genome association study identifies regions of the bovine genome and biological pathways involved in carcass trait performance in Holstein-Friesian cattle |
| Journal: | BMC genomics, 2014, 15: 837 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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