QTL #36690 Description:

 Trait Information
Trait name: Carcass weight Vertebrate Trait Ontology: n/a
Reported name: Product Trait Ontology: Dressed carcass weight
Symbol: CWT Clinical Measurement Ontology: Carcass weight
 QTL Map Information
Chromosome:3
QTL Peak Location:117.79 (cM)
QTL Span:117.79-117.79 (cM)
113.0-113.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109589557
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:-
Threshold significance level:Suggestive
VARIANCEn/a
P_valuesn/a
LOD_scoren/a
LS_meann/a
PostProbInc0.9274
Dominance effect:n/a
Additive effect:n/a
Associated Gene: ()
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #36690
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Holstein-Friesian cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for carcass traits. A total of 42,477 SNPs were used for analysis.
    Analysis:Single-marker regression and multi-locus Bayesian analysis were performed.
    Software:R software
    Notes:Significance cutoff used for Bayesian analysis: PP>0.95 significant, PP=0.9-0.95 suggestive
    Links:Edit
     Reference
    Authors:Doran Anthony G, Berry Donagh P, Creevey Christopher J
    Affiliation:Teagasc Animal and Bioscience Research Department, Animal & Grassland Research and Innovation Centre, Teagasc, Grange, Dunsany, Co, Meath, Ireland
    Title:Whole genome association study identifies regions of the bovine genome and biological pathways involved in carcass trait performance in Holstein-Friesian cattle
    Journal:BMC genomics, 2014, 15: 837
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  
    User inputs on reference #25273628
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2020 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk