| QTL Map Information |
|---|
| Chromosome: | 23 |
| QTL Peak Location: | 41.07 (cM) |
| QTL Span: | 40.62-41.53 (cM)
28.0-28.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs211023347 |
| Peak: | rs209284762 |
| Lower, "Significant": | rs109111911 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein and Normande dairy cattle in France. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip, with data imputed to whole-genome sequence, and analyzed for MAP resistance/susceptibility phenotypes. |
| Analysis: | Mixed linear models were used. |
| Software: | Fimpute, Minimac, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sanchez MP, Guatteo R, Davergne A, Saout J, Grohs C, Deloche MC, Taussat S, Fritz S, Boussaha M, Blanquefort P, Delafosse A, Joly A, Schibler L, Fourichon C, Boichard D |
| Affiliation: | Université Paris Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France |
| Title: | Identification of the ABCC4, IER3, and CBFA2T2 candidate genes for resistance to paratuberculosis from sequence-based GWAS in Holstein and Normande dairy cattle |
| Journal: | Genet Sel Evol, 2020, 52(1):14 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | controls vs. non-clinical cases vs. clinical cases |
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