Authors: G.A. Rohrer, R.M. Thallman, S. Shackelford, T. Wheeler, M. Koohmaraie
Affiliation: U.S. Meat Animal Research Center, Clay Center, NE Title: A genome scan for loci affecting pork quality in a Furoc-Landrace F2 population Journal: Animal Genetics, 37(1): 17-27 (2005)
DOI :
10.1111/j.1365-2052.2005.01368.x Links:
PubMed | Abstract
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( Related study: none )
Click on each trait to browse further along the related trait ontology tree
Click on each chromosome number to find the detailed QTL information on that chromosome
Number of QTL/association reported by traits:
QTL for Cooking loss
Chr.2 : QTL:2970 . Chr.15 : QTL:3010 , QTL:4329 .
QTL for Meat color
Chr.1 : QTL:4326 . Chr.2 : QTL:2971 , QTL:2978 . Chr.5 : QTL:2984 . Chr.8 : QTL:2993 . Chr.14 : QTL:3005 , QTL:3006 , QTL:3007 . Chr.15 : QTL:3009 . Chr.17 : QTL:3019 , QTL:3020 , QTL:3021 , QTL:3022 .
QTL for Muscle pH
Chr.2 : QTL:2972 , QTL:2976 . Chr.8 : QTL:2992 . Chr.13 : QTL:3002 .
QTL for Shear force
Chr.2 : QTL:2973 , QTL:2977 . Chr.5 : QTL:2985 . Chr.15 : QTL:3011 , QTL:3015 . Chr.17 : QTL:3016 .
QTL for Chew score
Chr.2 : QTL:2974 . Chr.15 : QTL:3012 .
QTL for Muscle moisture percentage
Chr.2 : QTL:2975 . Chr.5 : QTL:2986 . Chr.7 : QTL:2989 . Chr.13 : QTL:3004 .
QTL for Carcass weight (hot)
Chr.X : QTL:4333 . Chr.3 : QTL:2979 .
QTL for Body weight
Chr.X : QTL:3026 . Chr.3 : QTL:2980 .
QTL for Firmness
Chr.4 : QTL:2981 .
QTL for Intramuscular fat content
Chr.1 : QTL:4325 . Chr.4 : QTL:2982 . Chr.17 : QTL:3017 .
QTL for Myofibril fragmentation index
Chr.X : QTL:3024 . Chr.5 : QTL:2983 . Chr.8 : QTL:2994 . Chr.13 : QTL:3001 .
QTL for Taste intensity
Chr.5 : QTL:2987 .
QTL for Subcutaneous fat thickness
Chr.X : QTL:3029 . Chr.5 : QTL:2988 . Chr.10 : QTL:3000 .
QTL for Lean meat percentage
Chr.7 : QTL:2990 .
QTL for Sarcomere length
Chr.X : QTL:3027 . Chr.7 : QTL:2991 .
QTL for Marbling
Chr.8 : QTL:2995 . Chr.17 : QTL:3018 .
QTL for Longissimus muscle area
Chr.X : QTL:3028 . Chr.9 : QTL:2996 , QTL:2997 . Chr.10 : QTL:2999 . Chr.17 : QTL:3023 , QTL:4331 , QTL:4332 .
QTL for Fat percentage in carcass
Chr.X : QTL:3031 . Chr.9 : QTL:2998 .
QTL for Juiciness score
Chr.13 : QTL:3003 . Chr.15 : QTL:3013 .
QTL for Drip loss
Chr.14 : QTL:3008 . Chr.15 : QTL:3014 .
QTL for Off-flavor score
Chr.X : QTL:3025 .
QTL for Fat weight (total)
Chr.X : QTL:3030 .
QTL for Tenderness score
Chr.2 : QTL:4327 .
QTL for Longissimus muscle depth
Chr.15 : QTL:4328 .
QTL for Muscle pH decline
Chr.15 : QTL:4330 .
QTL/association Reported by chromosomes:
Chr.X (9) ,
Chr.1 (2) ,
Chr.2 (10) ,
Chr.3 (2) ,
Chr.4 (2) ,
Chr.5 (6) ,
Chr.7 (3) ,
Chr.8 (4) ,
Chr.9 (3) ,
Chr.10 (2) ,
Chr.13 (4) ,
Chr.14 (4) ,
Chr.15 (10) ,
Chr.17 (10) .
Number of gene-based eQTL/associations:
Cite this Dataset :
Animal QTLdb: Dataset from G.A. Rohrer, R.M. Thallman, S. Shackelford, T. Wheeler, M. Koohmaraie (2005). A genome scan for loci affecting pork quality in a Furoc-Landrace F2 population. Animal Genetics, 37(1): 17-27;
Curated into QTLdb on 2011-03-08. Universal link to this data set:
https://www.animalgenome.org/QTLdb/supp/?t=QhTm1V2QpL
OR
G.A. Rohrer, R.M. Thallman, S. Shackelford, T. Wheeler, M. Koohmaraie (2005). A genome scan for loci affecting pork quality in a Furoc-Landrace F2 population. Animal Genetics, 37(1): 17-27; DOI: https://dx.doi.org/10.1111/j.1365-2052.2005.01368.x
