Chicken QTL Database

Release 56
(Apr 24, 2025)

Curators: Cari Park /
Curated: 2025-04-29
Updated:

Publication # 33193617 Details

Authors:	Banos G, Lindsay V, Desta TT, Bettridge J, Sanchez-Molano E, Vallejo-Trujillo A, Matika O, Dessie T, Wigley P, Christley RM, Kaiser P, Hanotte O, Psifidi A (Contact: apsifidi@rvc.ac.uk)
Affiliation:	The Roslin Institute, The University of Edinburgh, Edinburgh, United Kingdom
Title:	Integrating Genetic and Genomic Analyses of Combined Health Data Across Ecotypes to Improve Disease Resistance in Indigenous African Chickens
Journal:	Frontiers In Genetics, 11: 543890 (2020)	DOI: 10.3389/fgene.2020.543890
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Antibody titer to fowl typhoid reported for chromosome(s): Chr.3: Asso:316037, Asso:315982, Asso:315981. QTL for Fecal egg count reported for chromosome(s): Chr.Z: Asso:316020. Chr.1: Asso:316036, Asso:316034, Asso:316032, Asso:316031, Asso:316029, Asso:316024, Asso:316027. Chr.2: Asso:316023, Asso:316022, Asso:316030. Chr.3: Asso:315979. Chr.4: Asso:316028, Asso:316026, Asso:316033. Chr.7: Asso:315980. Chr.14: Asso:316025. Chr.18: Asso:316021. Chr.19: Asso:315978. Chr.23: Asso:316035. QTL for Antibody titer to Marek's disease virus reported for chromosome(s): Chr.3: Asso:316019. Chr.11: Asso:316018. QTL for Antibody titer to infectious bursal disease virus reported for chromosome(s): Chr.1: Asso:316013. Chr.5: Asso:316017, Asso:316015, Asso:316014, Asso:315976. Chr.7: Asso:316012. Chr.14: Asso:315977. Chr.23: Asso:316016. QTL for Body condition score reported for chromosome(s): Chr.1: Asso:316011, Asso:316010. Chr.7: Asso:316008. Chr.26: Asso:316009, Asso:316007. QTL for Body weight reported for chromosome(s): Chr.2: Asso:315996. Chr.4: Asso:316006, Asso:316004, Asso:316005, Asso:316003, Asso:316001, Asso:316002, Asso:315999, Asso:316000, Asso:315998, Asso:315997, Asso:315995, Asso:315993, Asso:315994, Asso:315992, Asso:315990, Asso:315991, Asso:315989, Asso:315987, Asso:315985, Asso:315986, Asso:315984, Asso:315983, Asso:315975, Asso:315973, Asso:315974, Asso:315972, Asso:315970, Asso:315968, Asso:315969, Asso:315966, Asso:315967, Asso:315963, Asso:315964, Asso:315961, Asso:315962, Asso:315960, Asso:315959, Asso:315988, Asso:315971. Chr.5: Asso:315965. QTL/association Reported by chromosomes: Chr.Z (1), Chr.1 (10), Chr.2 (4), Chr.3 (5), Chr.4 (42), Chr.5 (5), Chr.7 (3), Chr.11 (1), Chr.14 (2), Chr.18 (1), Chr.19 (1), Chr.23 (2), Chr.26 (2). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Banos G, Lindsay V, Desta TT, Bettridge J, Sanchez-Molano E, Vallejo-Trujillo A, Matika O, Dessie T, Wigley P, Christley RM, Kaiser P, Hanotte O, Psifidi A (2020). Integrating Genetic and Genomic Analyses of Combined Health Data Across Ecotypes to Improve Disease Resistance in Indigenous African Chickens. Frontiers in genetics, 11: 543890; Curated into QTLdb on 2025-04-30. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=KrOq8P3KtX

Banos G, Lindsay V, Desta TT, Bettridge J, Sanchez-Molano E, Vallejo-Trujillo A, Matika O, Dessie T, Wigley P, Christley RM, Kaiser P, Hanotte O, Psifidi A (2020). Integrating Genetic and Genomic Analyses of Combined Health Data Across Ecotypes to Improve Disease Resistance in Indigenous African Chickens. Frontiers in genetics, 11: 543890; DOI: https://dx.doi.org/10.3389/fgene.2020.543890

Publication # 33193617 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: