Contact: Samantha K Beeson (email@example.com)
Veterinary Population Medicine Department,
University of Minnesota, St Paul, MN
All files are named according to the SNP chip ID referenced in the manuscript.
Files named *.probe_sequence.fa include the probe sequences used to
determine SNP locations in EquCab3.
Files named *.blast.EquCab3.txt include all 100% BLAST hits for each probe.
Files named *.unique_remap.FINAL.csv include relevant information on each
individual SNP that successfully mapped to EquCab3 using our probe-based approach.
Files named *.remap_failure.csv include reasons for remapping failure for
each SNP failing to map to EquCab3 using our probe-based approach.
Files named *.NCBI.remap.csv include the output from NCBI's Genome Remapping
Service, found here: https://www.ncbi.nlm.nih.gov/genome/tools/remap