The Swine Genome Sequencing Consortium
News and Updates   
(July 20, 2019)

    Pig genome build 10 statistics

    This is an internal release.
    The consortium members may write to pig-help@bbsrc.ac.uk for details.
    Refer to Pig Genome Coordinator's September Updates for release information.
                                     ##     Genome Length     ##
     Chr U Length                    =       1,419,636
     Chr U WGS Length                =       240,478,184
     Total Length (chr 1-18, X, Y)   =       2,540,767,118
    
                                     ##  Number of Contigs    ##
     No. of Contigs                  =       59,744
     No. of contigs in U             =       34
     No. of contigs in WGS           =       4,584
    
                                     ##  Assembly N50/N90     ##
     N50/10 total                    =       97,955  /       17,151
     N50/90 U                        =       68,619  /       19,616
     N50/90 U WGS                    =       112,084 /       30,573
    
                                     ## Genome Scaffold Stats ##
     Total length of scaffolds       =       2,588,106,638, 
     Total number of scaffolds       =       8,486 
     Average length of scaffolds     =       304,986
     Largest scaffold length         =       6,085,579
     N50                             =       806,269
     N60                             =       640,143
     N70                             =       481,531
     N80                             =       331,630
     N90                             =       177,619
     N100                            =       100
    

  • Sequencing in Progress — Statistics [ As of 05:01AM on Apr 15, 2011 (Fri) ]
    Sanger: In process: 2,810,152,102;
    Finished: 197,717,896;
    Total: 3,007,869,998 ( # of nucleotides )
    ChromosomeNumber of active projectsNumber of accessioned projects
    U3632
    119651961
    210041002
    3908905
    4920916
    5726717
    6950942
    7874867
    8905903
    9956953
    10493492
    11556555
    12404404
    1313191302
    1410071003
    15963962
    16541539
    17454454
    18385382
    Total:1625716178

    Genbank: From Sanger: 487,020;
    In progress:
    Total: 487,020 ( # of sequences deposited )

  • Sequencing progress in a glance


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