A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
DLG3   ENSSSCG00000012375 X:54702307-54757467    
DLG5 location ⇒ 14:83619876-83620004   FP085540,CH242-488K11,14:83618143-83657205
(Clone quality: bE488K11 on chr=14; Num_of_Contigs=2; )
DLG5 location ⇒ 14:83620242-83620387   FP085540,CH242-488K11,14:83618143-83657205
(Clone quality: bE488K11 on chr=14; Num_of_Contigs=2; )
DLG5 location ⇒ 14:83629282-83629475   FP085540,CH242-488K11,14:83618143-83657205
(Clone quality: bE488K11 on chr=14; Num_of_Contigs=2; )
DLG5 location ⇒ 14:83629593-83629767   FP085540,CH242-488K11,14:83618143-83657205
(Clone quality: bE488K11 on chr=14; Num_of_Contigs=2; )
DLG7 ENSSSCG00000005056 1:193078126-193127340   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
DLG7 location ⇒ 1:193091066-193090884   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
DLG7 location ⇒ 1:193101669-193101508   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
DLG7 location ⇒ 1:193105571-193105443   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
DLG7 location ⇒ 1:193106067-193105943   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
DLGAP1   ENSSSCG00000003690 6:70501557-70548141   CU929932,CH242-404H10,6:70456251-70552075
(Clone quality: bE404H10 on chr=6; Num_of_Contigs=5; )
DLGAP2   ENSSSCG00000015746 15:30639143-30730560   CU570834,CH242-255K14,15:30635122-30750645
(Clone quality: bE255K14 on chr=15; Num_of_Contigs=2; )
DLGAP4   ENSSSCG00000007317 17:41896252-42023128    
DLGAP5   ENSSSCG00000005056 1:193078126-193127340   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
DLK1 ENSSSCG00000002575 7:134213139-134319422    
DLK1 location ⇒ 7:134136016-134136159   FP102489,CH242-229K23,7:134134784-134138269
(Clone quality: bE229K23 on chr=7; Num_of_Contigs=11; )
DLK1 location ⇒ 7:134138039-134138269    
DLK1 location ⇒ 7:134318674-134318954   CU915706,CH242-501I18,7:134312233-134319444
(Clone quality: bE501I18 on chr=7; Num_of_Contigs=16; )
DLK1 location ⇒ 7:134319105-134319430   CU915706,CH242-501I18,7:134312233-134319444
(Clone quality: bE501I18 on chr=7; Num_of_Contigs=16; )
DLK2   ENSSSCG00000001682 7:44672711-44677157   CU928765,CH242-349L1,7:44668725-44701199
(Clone quality: bE349L1 on chr=7; Num_of_Contigs=5; )
DLL3   ENSSSCG00000002987 6:33384704-33392257   FP102547,CH242-120H3,6:33375907-33395729
(Clone quality: bE120H3 on chr=6; Num_of_Contigs=3; )
DLL4   ENSSSCG00000004755 1:136810186-136818929    
DLST   ENSSSCG00000002374 7:106344847-106364955   CT797477,CH242-140C11,7:106303131-106390499
(Clone quality: bE140C11 on chr=7; Num_of_Contigs=2; )
DLX1   ENSSSCG00000015953 15:73288849-73291437   CU915442,CH242-107P23,15:73162307-73297518
(Clone quality: bE107P23 on chr=15; Num_of_Contigs=12; )
DLX2 ENSSSCG00000015954 15:73323760-73325790   CU915442,CH242-107P23,15:73304014-73330253
(Clone quality: bE107P23 on chr=15; Num_of_Contigs=12; )
DLX3 ENSSSCG00000017589 12:24924882-24928392   FP236796,CH242-293M16,12:24910595-24932232
(Clone quality: bE293M16 on chr=12; Num_of_Contigs=11; )
DLX4 ENSSSCG00000017587 12:24904710-24905580   FP236796,CH242-293M16,12:24903492-24910494
(Clone quality: bE293M16 on chr=12; Num_of_Contigs=11; )
DMBT1 ENSSSCG00000002981 6:33194194-33223558    
DMBT1 location ⇒ 6:33194739-33194194   FP236607,CH242-159H19,6:33187427-33209379
(Clone quality: bE159H19 on chr=6; Num_of_Contigs=6; )
DMBT1 location ⇒ 6:33197297-33197025   FP236607,CH242-159H19,6:33187427-33209379
(Clone quality: bE159H19 on chr=6; Num_of_Contigs=6; )
DMBT1 location ⇒ 6:33198598-33198207   FP236607,CH242-159H19,6:33187427-33209379
(Clone quality: bE159H19 on chr=6; Num_of_Contigs=6; )
DMBT1 location ⇒ 6:33209946-33209640   FP236607,CH242-159H19,6:33209480-33217621
(Clone quality: bE159H19 on chr=6; Num_of_Contigs=6; )
DMBX1   ENSSSCG00000003900 6:118082857-118089169   FP101978,CH242-150B13,6:118063678-118096021
(Clone quality: bE150B13 on chr=6; Num_of_Contigs=11; )
DMD ENSSSCG00000012205 X:26481234-26943845    
DMD location ⇒ X:26481700-26481435 CU915484,CH242-339O8,X:26444430-26589472
(Clone quality: bE339O8 on chr=X; Num_of_Contigs=2; ) 		 
DMD location ⇒ X:26516337-26516088 CU915484,CH242-339O8,X:26444430-26589472
(Clone quality: bE339O8 on chr=X; Num_of_Contigs=2; ) 		 
DMD location ⇒ X:26863324-26863053   CU463982,CH242-18F12,X:26844237-26869188
(Clone quality: bE18F12 on chr=X; Num_of_Contigs=6; )
DMD location ⇒ X:26943097-26942826   CU915460,CH242-202I7,X:26940094-26961463
(Clone quality: bE202I7 on chr=X; Num_of_Contigs=8; )
DMKN   ENSSSCG00000002883 6:29996228-30009236   CU694505,CH242-50N19,6:29976458-30017276
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
DMP1 ENSSSCG00000009220 8:112786801-112801299   CU627975,CH242-146A20,8:112777065-112816947
(Clone quality: bE146A20 on chr=8; Num_of_Contigs=6; )
DMP1 ENSSSCG00000015393 9:87098122-87142570    
DMP1 location ⇒ 8:112789176-112786803   CU627975,CH242-146A20,8:112777065-112816947
(Clone quality: bE146A20 on chr=8; Num_of_Contigs=6; )
DMP1 location ⇒ 8:112795470-112795392   CU627975,CH242-146A20,8:112777065-112816947
(Clone quality: bE146A20 on chr=8; Num_of_Contigs=6; )
DMP1 location ⇒ 8:112801299-112801193   CU627975,CH242-146A20,8:112777065-112816947
(Clone quality: bE146A20 on chr=8; Num_of_Contigs=6; )
DMRT1   ENSSSCG00000005237 1:231248774-231271897    
DMRT1_PIG   ENSSSCG00000005236 1:231177852-231182808    
DMRT2   ENSSSCG00000005233 1:231058235-231063766   CU929525,CH242-187L20,1:231051706-231087218
(Clone quality: bE187L20 on chr=1; Num_of_Contigs=2; )
DMRTA1   ENSSSCG00000005131 1:209195806-209199550   CU914719,CH242-423C1,1:209156452-209210763
(Clone quality: bE423C1 on chr=1; Num_of_Contigs=3; )
DMRTA2   ENSSSCG00000003878 6:115443063-115443245   CU928285,CH242-191A16,6:115380610-115454593
(Clone quality: bE191A16 on chr=6; Num_of_Contigs=4; )
DMRTB1   ENSSSCG00000003847 6:112643967-112651376   CU694870,CH242-271J13,6:112588316-112682097
(Clone quality: bE271J13 on chr=6; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team