A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IgE ENSSSCG00000006413 4:94624034-94630450   CU856458,CH242-123O3,4:94614161-94682848
(Clone quality: bE123O3 on chr=4; Num_of_Contigs=6; )
IgE ENSSSCG00000011810 13:94765937-94777523   CU466378,CH242-185B2,13:94764414-94780737
(Clone quality: bE185B2 on chr=13; Num_of_Contigs=3; )
IgE ENSSSCG00000013577 2:51062170-51072262   CU929919,CH242-334A8,2:51060964-51078871
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
IGF1 ENSSSCG00000000857 5:77082628-77154428    
IGF1 location ⇒ 5:77087321-77087628   FP067336,CH242-131N2,5:76994706-77105552
(Clone quality: bE131N2 on chr=5; Num_of_Contigs=2; )
IGF1 location ⇒ 5:77087467-77087625   FP067336,CH242-131N2,5:76994706-77105552
(Clone quality: bE131N2 on chr=5; Num_of_Contigs=2; )
IGF1 location ⇒ 5:77137165-77137347   CU639453,CH242-138L2,5:77119315-77199357
(Clone quality: bE138L2 on chr=5; Num_of_Contigs=3; )
IGF1 location ⇒ 5:77154203-77154424   CU639453,CH242-138L2,5:77119315-77199357
(Clone quality: bE138L2 on chr=5; Num_of_Contigs=3; )
IGF1R ENSSSCG00000004812 1:145050345-145349833    
IGF2 ENSSSCG00000011795 13:93473449-93508864    
IGF2 ENSSSCG00000008673 8:72934-332448    
IGF2 ENSSSCG00000001827 7:59395972-59397683   CU571146,CH242-69O5,7:59362356-59437877
(Clone quality: bE69O5 on chr=7; Num_of_Contigs=5; )
IGF2AS   ENSSSCG00000008673 8:72934-332448    
IGF2BP1   ENSSSCG00000001827 7:59395972-59397683   CU571146,CH242-69O5,7:59362356-59437877
(Clone quality: bE69O5 on chr=7; Num_of_Contigs=5; )
IGF2BP2   ENSSSCG00000011795 13:93473449-93508864    
IGF2R ENSSSCG00000004042 1:8364284-8379239    
IGF2R ENSSSCG00000004044 1:8497941-8600764    
IGF2R location ⇒ 1:8366176-8366412   CU466379,CH242-186M5,1:8363810-8375863
(Clone quality: bE186M5 on chr=1; Num_of_Contigs=9; )
IGF2R location ⇒ 1:8510771-8510535   FP017297,CH242-205C17,1:8502128-8523621
(Clone quality: bE205C17 on chr=1; Num_of_Contigs=7; )
IGF2R location ⇒ 1:8519659-8519438   FP017297,CH242-205C17,1:8502128-8523621
(Clone quality: bE205C17 on chr=1; Num_of_Contigs=7; )
IGF2R location ⇒ 1:8520426-8520165   FP017297,CH242-205C17,1:8502128-8523621
(Clone quality: bE205C17 on chr=1; Num_of_Contigs=7; )
IGFALS ENSSSCG00000008013 3:35875032-35878022   CU929968,CH242-75C10,3:35871551-35889570
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
IGFALS location ⇒ 3:35875032-35875084   CU929968,CH242-75C10,3:35871551-35889570
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
IGFALS location ⇒ 3:35876072-35878020   CU929968,CH242-75C10,3:35871551-35889570
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
IGFBP1 ENSSSCG00000016728 18:48650114-48654870    
IGFBP1 location ⇒ 18:48651908-48652048   FP103017,CH242-169F4,18:48634583-48653276
(Clone quality: bE169F4 on chr=18; Num_of_Contigs=6; )
IGFBP1 location ⇒ 18:48653064-48653194   FP103017,CH242-169F4,18:48634583-48653276
(Clone quality: bE169F4 on chr=18; Num_of_Contigs=6; )
IGFBP1 location ⇒ 18:48654183-48654870   FP103017,CH242-169F4,18:48653377-48657916
(Clone quality: bE169F4 on chr=18; Num_of_Contigs=6; )
IGFBP3 ENSSSCG00000016729 18:48778107-48782267    
IGFBP3 location ⇒ 18:48778009-48778064   FP103017,CH242-169F4,18:48759979-48778264
(Clone quality: bE169F4 on chr=18; Num_of_Contigs=6; )
IGFBP3 location ⇒ 18:48781149-48781378   FP103017,CH242-169F4,18:48778365-48782863
(Clone quality: bE169F4 on chr=18; Num_of_Contigs=6; )
IGFBP3 location ⇒ 18:48782148-48782267   FP103017,CH242-169F4,18:48778365-48782863
(Clone quality: bE169F4 on chr=18; Num_of_Contigs=6; )
IGFBP4 ENSSSCG00000017472 12:19797073-19811336    
IGFBP5 ENSSSCG00000016178 15:112017411-112019845   CU914349,CH242-487L5,15:112013030-112021709
(Clone quality: bE487L5 on chr=15; Num_of_Contigs=9; )
IGFBP6 ENSSSCG00000000255 5:16854964-16855290   CU469296,CH242-241K11,5:16854767-16869473
(Clone quality: bE241K11 on chr=5; Num_of_Contigs=15; )
IGFBP7 ENSSSCG00000008913 8:48074809-48147152    
IGFBP7 location ⇒ 8:48076538-48076411   CU984592,CH242-325A10,8:48073654-48087098
(Clone quality: bE325A10 on chr=8; Num_of_Contigs=1; )
IGFBP7 location ⇒ 8:48077470-48077350   CU984592,CH242-325A10,8:48073654-48087098
(Clone quality: bE325A10 on chr=8; Num_of_Contigs=1; )
IGFBP7 location ⇒ 8:48083143-48083030   CU984592,CH242-325A10,8:48073654-48087098
(Clone quality: bE325A10 on chr=8; Num_of_Contigs=1; )
IGFBP7 location ⇒ 8:48146949-48146623   CU984592,CH242-325A10,8:48103327-48155105
(Clone quality: bE325A10 on chr=8; Num_of_Contigs=1; )
IGFBPL1 ENSSSCG00000005360 1:250538918-250641600    
IGFBPL1 location ⇒ 1:250641557-250641141   CU210910,CH242-81E21,1:250549981-250664896
(Clone quality: bE81E21 on chr=1; Num_of_Contigs=4; )
IgGh location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IGH@ ENSSSCG00000013414 2:46101495-46418194    
IGHD location ⇒ 17:42752288-42752228   CU582899,CH242-513O9,17:42751942-42756205
(Clone quality: bE513O9 on chr=17; Num_of_Contigs=16; )
IGHD location ⇒ 17:42754796-42754678   CU582899,CH242-513O9,17:42751942-42756205
(Clone quality: bE513O9 on chr=17; Num_of_Contigs=16; )
IGHD location ⇒ 17:42757931-42757828   CU582899,CH242-513O9,17:42756306-42762989
(Clone quality: bE513O9 on chr=17; Num_of_Contigs=16; )
IGHG1.01 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IGHG1.02 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IGHG2.01 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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