A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ITGB4 location ⇒ 12:4016593-4016445 CU928968,CH242-19M24,12:3978819-4017836
(Clone quality: bE19M24 on chr=12; Num_of_Contigs=4; ) 		 
ITGB4 location ⇒ 12:4018640-4018536 CU928968,CH242-19M24,12:4017937-4068721
(Clone quality: bE19M24 on chr=12; Num_of_Contigs=4; ) 		 
ITGB4 location ⇒ 12:4019086-4018893 CU928968,CH242-19M24,12:4017937-4068721
(Clone quality: bE19M24 on chr=12; Num_of_Contigs=4; ) 		 
ITGB5 ENSSSCG00000011863 13:101914435-101965525    
ITGB5 location ⇒ 13:101916570-101916632   CU466522,CH242-89F13,13:101913743-101925905
(Clone quality: bE89F13 on chr=13; Num_of_Contigs=11; )
ITGB5 location ⇒ 13:101925827-101925905    
ITGB5 location ⇒ 13:101931479-101931910   CU466522,CH242-89F13,13:101926006-101942805
(Clone quality: bE89F13 on chr=13; Num_of_Contigs=11; )
ITGB5 location ⇒ 13:101955488-101955652   CU466522,CH242-89F13,13:101942906-101974333
(Clone quality: bE89F13 on chr=13; Num_of_Contigs=11; )
ITGB6 location ⇒ 15:62349231-62349648   CU856485,CH242-79D11,15:62338501-62355620
(Clone quality: bE79D11 on chr=15; Num_of_Contigs=4; )
ITGB6 location ⇒ 15:62353894-62354119   CU856485,CH242-79D11,15:62338501-62355620
(Clone quality: bE79D11 on chr=15; Num_of_Contigs=4; )
ITGB6 location ⇒ 15:62413549-62413300   CU929017,CH242-136H2,15:62405838-62415702
(Clone quality: bE136H2 on chr=15; Num_of_Contigs=11; )
ITGB6 location ⇒ 15:62511624-62511207   CU929017,CH242-136H2,15:62499150-62512200
(Clone quality: bE136H2 on chr=15; Num_of_Contigs=11; )
ITGB7 ENSSSCG00000000257 5:16877596-16884453    
ITGB7 location ⇒ 5:16878885-16878687   CU550678,CH242-340I21,5:16869474-16882505
(Clone quality: bE340I21 on chr=5; Num_of_Contigs=10; )
ITGB7 location ⇒ 5:16879236-16879014   CU550678,CH242-340I21,5:16869474-16882505
(Clone quality: bE340I21 on chr=5; Num_of_Contigs=10; )
ITGB7 location ⇒ 5:16879698-16879470   CU550678,CH242-340I21,5:16869474-16882505
(Clone quality: bE340I21 on chr=5; Num_of_Contigs=10; )
ITGB7 location ⇒ 5:16880224-16880036   CU550678,CH242-340I21,5:16869474-16882505
(Clone quality: bE340I21 on chr=5; Num_of_Contigs=10; )
ITGB8 ENSSSCG00000015375 9:83925614-83995388    
ITGB8 location ⇒ 9:83947838-83947741   FP016202,CH242-105D13,9:83880612-83948504
(Clone quality: bE105D13 on chr=9; Num_of_Contigs=6; )
ITGB8 location ⇒ 9:83978367-83978313   FP016202,CH242-105D13,9:83973644-84004333
(Clone quality: bE105D13 on chr=9; Num_of_Contigs=6; )
ITGBL1 ENSSSCG00000009526 11:70935096-71046518    
ITGBL1 location ⇒ 11:71019307-71019459   CU633708,CH242-372E20,11:71006487-71032629
(Clone quality: bE372E20 on chr=11; Num_of_Contigs=1; )
ITGBL1 location ⇒ 11:71025827-71025952   CU633708,CH242-372E20,11:71006487-71032629
(Clone quality: bE372E20 on chr=11; Num_of_Contigs=1; )
ITGBL1 location ⇒ 11:71030441-71030584   CU633708,CH242-372E20,11:71006487-71032629
(Clone quality: bE372E20 on chr=11; Num_of_Contigs=1; )
ITGBL1 location ⇒ 11:71034283-71034427   CU633708,CH242-372E20,11:71032730-71059904
(Clone quality: bE372E20 on chr=11; Num_of_Contigs=1; )
ITIH1 ENSSSCG00000011450 13:29488889-29502919   CU466500,CH242-511E20,13:29487518-29519739
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH1 location ⇒ 13:29489551-29489708   CU466500,CH242-511E20,13:29487518-29519739
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH1 location ⇒ 13:29495410-29495593   CU466500,CH242-511E20,13:29487518-29519739
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH1 location ⇒ 13:29500550-29500753   CU466500,CH242-511E20,13:29487518-29519739
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH1 location ⇒ 13:29501605-29501779   CU466500,CH242-511E20,13:29487518-29519739
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH2   ENSSSCG00000011128 10:59995273-60014981   CU464012,CH242-396O11,10:59995272-60031876
(Clone quality: bE396O11 on chr=10; Num_of_Contigs=7; )
ITIH3 ENSSSCG00000011451 13:29507641-29521520    
ITIH3 location ⇒ 13:15430171-15430054   CU915628,CH242-175K3,13:15400630-15517512
(Clone quality: bE175K3 on chr=13; Num_of_Contigs=3; )
ITIH3 location ⇒ 13:1949080-1948967   FP003587,CH242-127D11,13:1856315-1986266
(Clone quality: bE127D11 on chr=13; Num_of_Contigs=2; )
ITIH3 location ⇒ 13:25717004-25716871   CU633694,CH242-277F5,13:25598668-25748928
(Clone quality: bE277F5 on chr=13; Num_of_Contigs=2; )
ITIH3 location ⇒ 13:29382927-29382858   CU469164,CH242-456I18,13:29378087-29391739
(Clone quality: bE456I18 on chr=13; Num_of_Contigs=15; )
ITIH4 ENSSSCG00000011453 13:29598798-29610281   CU466500,CH242-511E20,13:29591579-29610349
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH4 location ⇒ 13:29525387-29525169   CU466500,CH242-511E20,13:29519840-29526571
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH4 location ⇒ 13:29600154-29600317   CU466500,CH242-511E20,13:29591579-29610349
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH4 location ⇒ 13:29605683-29605866   CU466500,CH242-511E20,13:29591579-29610349
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH4 location ⇒ 13:29605955-29606142   CU466500,CH242-511E20,13:29591579-29610349
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH5   ENSSSCG00000011129 10:60032080-60101959    
ITIH5L   ENSSSCG00000012339 X:47139469-47144251   FP091239,CH242-6G17,X:47138888-47144420
(Clone quality: bE6G17 on chr=X; Num_of_Contigs=4; )
ITK ENSSSCG00000017056 16:63700769-63768800    
ITK location ⇒ 16:63701278-63700769   CU896613,CH242-137H14,16:63700243-63711586
(Clone quality: bE137H14 on chr=16; Num_of_Contigs=5; )
ITK location ⇒ 16:63704664-63704506   CU896613,CH242-137H14,16:63700243-63711586
(Clone quality: bE137H14 on chr=16; Num_of_Contigs=5; )
ITK location ⇒ 16:63707799-63707745   CU896613,CH242-137H14,16:63700243-63711586
(Clone quality: bE137H14 on chr=16; Num_of_Contigs=5; )
ITLN2 ENSSSCG00000006373 4:93058605-93086827    
ITM2A   ENSSSCG00000012448 X:63094445-63101440   CU302273,CH242-384E8,X:63075697-63129808
(Clone quality: bE384E8 on chr=X; Num_of_Contigs=3; )
ITM2B ENSSSCG00000009403 11:18926256-18955058    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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