A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
TMEM8 location ⇒ 3:35441750-35441613   FP103065,CH242-393N23,3:35429454-35444197
(Clone quality: bE393N23 on chr=3; Num_of_Contigs=5; )
TMEM8 location ⇒ 3:35442166-35442096   FP103065,CH242-393N23,3:35429454-35444197
(Clone quality: bE393N23 on chr=3; Num_of_Contigs=5; )
TMEM80   ENSSSCG00000012849 2:233074-238014   FP015900,CH242-40P17,2:201823-266668
(Clone quality: bE40P17 on chr=2; Num_of_Contigs=6; )
TMEM81   ENSSSCG00000015289 9:63177222-63177620   FP103014,CH242-134F9,9:63162276-63177621
(Clone quality: bE134F9 on chr=9; Num_of_Contigs=6; )
TMEM82   ENSSSCG00000003466 6:51495123-51497415   CU457447,CH242-71A8,6:51494097-51525122
(Clone quality: bE71A8 on chr=6; Num_of_Contigs=17; )
TMEM85   ENSSSCG00000002244 7:88039575-88044264   CU407046,CH242-221M18,7:87977656-88060858
(Clone quality: bE221M18 on chr=7; Num_of_Contigs=3; )
TMEM86A   ENSSSCG00000013360 2:37718824-37722789   CU915335,CH242-299H5,2:37673371-37742014
(Clone quality: bE299H5 on chr=2; Num_of_Contigs=5; )
TMEM86B   ENSSSCG00000003302 6:41457531-41459218   FP245423,CH242-507H20,6:41440341-41468144
(Clone quality: bE507H20 on chr=6; Num_of_Contigs=16; )
TMEM87A   ENSSSCG00000004730 1:135353160-135396242   CU463161,CH242-286I1,1:135313267-135397048
(Clone quality: bE286I1 on chr=1; Num_of_Contigs=2; )
TMEM87B   ENSSSCG00000008102 3:39680760-39726211    
TMEM89   ENSSSCG00000011362 13:26259993-26260813   CU633242,CH242-208G16,13:26234913-26263430
(Clone quality: bE208G16 on chr=13; Num_of_Contigs=5; )
TMEM8A   ENSSSCG00000007985 3:35438424-35444553    
TMEM8B   ENSSSCG00000005325 1:247648895-247675337    
TMEM91   ENSSSCG00000003014 6:34064407-34067801   FP236582,CH242-238L13,6:34063629-34073800
(Clone quality: bE238L13 on chr=6; Num_of_Contigs=11; )
TMEM92   ENSSSCG00000017580 12:24675090-24681261   CU694879,CH242-301O20,12:24674422-24681588
(Clone quality: bE301O20 on chr=12; Num_of_Contigs=13; )
TMEM93   ENSSSCG00000017867 12:47054050-47054382   FP016040,CH242-164K7,12:47045956-47064002
(Clone quality: bE164K7 on chr=12; Num_of_Contigs=2; )
TMEM95   ENSSSCG00000017945 12:49831020-49831716   CU681851,CH242-516E15,12:49829637-49831926
(Clone quality: bE516E15 on chr=12; Num_of_Contigs=27; )
TMEM98   ENSSSCG00000017727 12:39681721-39694532   FP017292,CH242-263E12,12:39622307-39714413
(Clone quality: bE263E12 on chr=12; Num_of_Contigs=2; )
TMF1 location ⇒ 13:109444494-109444432   CU633650,CH242-194M8,13:109403457-109451276
(Clone quality: bE194M8 on chr=13; Num_of_Contigs=3; )
TMF1 location ⇒ 13:36383892-36383828   CU861639,CH242-72P13,13:36366932-36384762
(Clone quality: bE72P13 on chr=13; Num_of_Contigs=3; )
TMF1 location ⇒ 13:42262806-42262723   CU464138,CH242-109C12,13:42258764-42281066
(Clone quality: bE109C12 on chr=13; Num_of_Contigs=5; )
TMF1 location ⇒ 13:55531005-55531056   CU655990,CH242-268L7,13:55512556-55562333
(Clone quality: bE268L7 on chr=13; Num_of_Contigs=5; )
TMIE   ENSSSCG00000011328 13:24846007-24846569   CU856704,CH242-520E7,13:24840289-24847506
(Clone quality: bE520E7 on chr=13; Num_of_Contigs=12; )
TMIGD1 ENSSSCG00000017798 12:44356605-44366029   CU929650,CH242-46P9,12:44356572-44372174
(Clone quality: bE46P9 on chr=12; Num_of_Contigs=13; )
TMIGD1 location ⇒ 12:44232257-44232362   CU929650,CH242-46P9,12:44226750-44246270
(Clone quality: bE46P9 on chr=12; Num_of_Contigs=13; )
TMIGD1 location ⇒ 12:44234821-44234936   CU929650,CH242-46P9,12:44226750-44246270
(Clone quality: bE46P9 on chr=12; Num_of_Contigs=13; )
TMIGD1 location ⇒ 12:44356882-44356604   CU929650,CH242-46P9,12:44356572-44372174
(Clone quality: bE46P9 on chr=12; Num_of_Contigs=13; )
TMIGD1 location ⇒ 12:44361298-44361142   CU929650,CH242-46P9,12:44356572-44372174
(Clone quality: bE46P9 on chr=12; Num_of_Contigs=13; )
TMIGD2   ENSSSCG00000013504 2:48532116-48541950    
TMLHE   ENSSSCG00000012806 X:123183078-123252926 CU914687,CH242-92A22,X:123079486-123279612
(Clone quality: bE92A22 on chr=X; Num_of_Contigs=11; )
 
TMOD1   ENSSSCG00000005365 1:250903125-250942710    
TMOD2   ENSSSCG00000004628 1:124979961-125025474   CU019579,CH242-2K4,1:124966545-125142351
(Clone quality: bE2K4 on chr=1; Num_of_Contigs=2; )
TMOD3 location ⇒ 1:124729286-124728689   CU855739,CH242-269H22,1:124620385-124732246
(Clone quality: bE269H22 on chr=1; Num_of_Contigs=5; )
TMOD3 location ⇒ 1:124773384-124773183   CU855739,CH242-269H22,1:124759152-124778542
(Clone quality: bE269H22 on chr=1; Num_of_Contigs=5; )
TMOD3 location ⇒ 1:124863004-124862407   FP236432,CH242-502C24,1:124853945-124863837
(No clone quality info on )
TMOD3 location ⇒ 1:124885580-124885411   FP236432,CH242-502C24,1:124885379-124888507
(No clone quality info on )
TMOD4   ENSSSCG00000006631 4:102028672-102033642 CU138569,CH242-265M12,4:101911025-102092543
(Clone quality: bE265M12 on chr=4; Num_of_Contigs=8; )
 
TMPO   ENSSSCG00000000887 5:80837821-80865166   FP102239,CH242-207O15,5:80776802-80905572
(Clone quality: bE207O15 on chr=5; Num_of_Contigs=5; )
TMPRSS11A   ENSSSCG00000008927 8:56587773-56632933    
TMPRSS11B   ENSSSCG00000008932 8:56815353-56824525   FP236685,CH242-279D19,8:56812947-56830754
(Clone quality: bE279D19 on chr=8; Num_of_Contigs=15; )
TMPRSS11D ENSSSCG00000008926 8:56522319-56548941    
TMPRSS11F   ENSSSCG00000008930 8:56687255-56735099    
TMPRSS2   ENSSSCG00000012078 13:144431299-144457798    
TMPRSS4   ENSSSCG00000015086 9:44286708-44320214    
TMPRSS5   ENSSSCG00000015049 9:40291978-40301606   CU694638,CH242-59I6,9:40282417-40347264
(Clone quality: bE59I6 on chr=9; Num_of_Contigs=9; )
TMSB10   ENSSSCG00000008245 3:54737640-54738656   CU694574,CH242-223J5,3:54637290-54739595
(Clone quality: bE223J5 on chr=3; Num_of_Contigs=4; )
TMSB15A   ENSSSCG00000012517 X:81566033-81569058 FP102262,CH242-56M13,X:81498967-81645707
(Clone quality: bE56M13 on chr=X; Num_of_Contigs=1; )
 
TMSB4X location ⇒ X:8602746-8602856 FP102063,CH242-76E20,X:8545658-8722254
(Clone quality: bE76E20 on chr=X; Num_of_Contigs=2; )
 
TMSB4X location ⇒ X:8603264-8603658 FP102063,CH242-76E20,X:8545658-8722254
(Clone quality: bE76E20 on chr=X; Num_of_Contigs=2; )
 
TMSB4X location ⇒ X:8766819-8766929 FP085461,CH242-524I24,X:8722255-8912483
(Clone quality: bE524I24 on chr=X; Num_of_Contigs=2; )
 
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-8

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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