A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ITB6_PIG   ENSSSCG00000015886 15:62313529-62376079    
ITCH ENSSSCG00000007280 17:39946589-40001608    
ITCH location ⇒ 17:10215233-10215322   CU896619,CH242-280F16,17:10210782-10220412
(Clone quality: bE280F16 on chr=17; Num_of_Contigs=13; )
ITCH location ⇒ 17:10964344-10964271   CU407001,CH242-336P3,17:10961871-10974968
(Clone quality: bE336P3 on chr=17; Num_of_Contigs=6; )
ITCH location ⇒ 17:4403033-4403122   FP015764,CH242-18B21,17:4397727-4404828
(Clone quality: bE18B21 on chr=17; Num_of_Contigs=22; )
ITCH location ⇒ 17:5071595-5071498   CU682348,CH242-166L11,17:5066629-5083566
(Clone quality: bE166L11 on chr=17; Num_of_Contigs=5; )
ITFG1 ENSSSCG00000002845 6:25200040-25233600    
ITFG1 location ⇒ 6:25200248-25200114   CU972412,CH242-108I17,6:25176115-25226978
(Clone quality: bE108I17 on chr=6; Num_of_Contigs=8; )
ITFG1 location ⇒ 6:25208059-25207914   CU972412,CH242-108I17,6:25176115-25226978
(Clone quality: bE108I17 on chr=6; Num_of_Contigs=8; )
ITFG1 location ⇒ 6:25233601-25233505   CU972412,CH242-108I17,6:25227079-25234561
(Clone quality: bE108I17 on chr=6; Num_of_Contigs=8; )
ITFG1 location ⇒ 6:25249266-25249348   CU972412,CH242-108I17,6:25246812-25269500
(Clone quality: bE108I17 on chr=6; Num_of_Contigs=8; )
ITFG2   ENSSSCG00000000742 5:63168935-63181278   CU856242,CH242-195D5,5:63164130-63204612
(Clone quality: bE195D5 on chr=5; Num_of_Contigs=10; )
ITFG3   ENSSSCG00000007980 3:35299116-35324438   FP102907,CH242-215K19,3:35270245-35325917
(Clone quality: bE215K19 on chr=3; Num_of_Contigs=7; )
ITGA1 ENSSSCG00000016885 16:29202547-29281645    
ITGA1 location ⇒ 16:29240823-29240975   CU463114,CH242-218M18,16:29234048-29273660
(Clone quality: bE218M18 on chr=16; Num_of_Contigs=3; )
ITGA1 location ⇒ 16:29258356-29258521   CU463114,CH242-218M18,16:29234048-29273660
(Clone quality: bE218M18 on chr=16; Num_of_Contigs=3; )
ITGA1 location ⇒ 16:29299989-29299837   CU856099,CH242-229O6,16:29299424-29306539
(Clone quality: bE229O6 on chr=16; Num_of_Contigs=11; )
ITGA1 location ⇒ 16:29359342-29359177   CU856099,CH242-229O6,16:29356983-29360237
(Clone quality: bE229O6 on chr=16; Num_of_Contigs=11; )
ITGA10 ENSSSCG00000006687 4:103508072-103523538    
ITGA10 location ⇒ 4:103516149-103516318   CU606940,CH242-153I6,4:103497483-103521572
(Clone quality: bE153I6 on chr=4; Num_of_Contigs=12; )
ITGA10 location ⇒ 4:103516415-103516558   CU606940,CH242-153I6,4:103497483-103521572
(Clone quality: bE153I6 on chr=4; Num_of_Contigs=12; )
ITGA10 location ⇒ 4:103517102-103517216   CU606940,CH242-153I6,4:103497483-103521572
(Clone quality: bE153I6 on chr=4; Num_of_Contigs=12; )
ITGA11 ENSSSCG00000004961 1:173488393-173570628    
ITGA11 location ⇒ 1:173488492-173488399   CU468716,CH242-496M3,1:173488362-173492534
(Clone quality: bE496M3 on chr=1; Num_of_Contigs=17; )
ITGA11 location ⇒ 1:173489364-173489270   CU468716,CH242-496M3,1:173488362-173492534
(Clone quality: bE496M3 on chr=1; Num_of_Contigs=17; )
ITGA11 location ⇒ 1:173491442-173491364   CU468716,CH242-496M3,1:173488362-173492534
(Clone quality: bE496M3 on chr=1; Num_of_Contigs=17; )
ITGA2 ENSSSCG00000016887 16:29427892-29498935   CU928375,CH242-425K19,16:29401619-29534620
(Clone quality: bE425K19 on chr=16; Num_of_Contigs=1; )
ITGA2 location ⇒ 16:29317426-29317276   CU856099,CH242-229O6,16:29312580-29322317
(Clone quality: bE229O6 on chr=16; Num_of_Contigs=11; )
ITGA2 location ⇒ 16:29450442-29450592   CU928375,CH242-425K19,16:29401619-29534620
(Clone quality: bE425K19 on chr=16; Num_of_Contigs=1; )
ITGA2 location ⇒ 16:29455592-29455746   CU928375,CH242-425K19,16:29401619-29534620
(Clone quality: bE425K19 on chr=16; Num_of_Contigs=1; )
ITGA2 location ⇒ 16:29456161-29456328   CU928375,CH242-425K19,16:29401619-29534620
(Clone quality: bE425K19 on chr=16; Num_of_Contigs=1; )
ITGA2B ENSSSCG00000017357 12:16827361-16844026   CU468984,CH242-216D12,12:16822598-16850151
(Clone quality: bE216D12 on chr=12; Num_of_Contigs=22; )
ITGA2B location ⇒ 12:16827621-16827363   CU468984,CH242-216D12,12:16822598-16850151
(Clone quality: bE216D12 on chr=12; Num_of_Contigs=22; )
ITGA2B location ⇒ 12:16835536-16835353   CU468984,CH242-216D12,12:16822598-16850151
(Clone quality: bE216D12 on chr=12; Num_of_Contigs=22; )
ITGA2B location ⇒ 12:16838865-16838653   CU468984,CH242-216D12,12:16822598-16850151
(Clone quality: bE216D12 on chr=12; Num_of_Contigs=22; )
ITGA2B location ⇒ 12:16844004-16843808   CU468984,CH242-216D12,12:16822598-16850151
(Clone quality: bE216D12 on chr=12; Num_of_Contigs=22; )
ITGA3 ENSSSCG00000017578 12:24655910-24790905    
ITGA3 location ⇒ 12:24789644-24789753   FP236796,CH242-293M16,12:24786156-24790241
(Clone quality: bE293M16 on chr=12; Num_of_Contigs=11; )
ITGA3 location ⇒ 12:24790684-24790838   FP236796,CH242-293M16,12:24790342-24797378
(Clone quality: bE293M16 on chr=12; Num_of_Contigs=11; )
ITGA4 ENSSSCG00000016009 15:81544892-81624138   CU861559,CH242-348D16,15:81514178-81645419
(Clone quality: bE348D16 on chr=15; Num_of_Contigs=3; )
ITGA4 location ⇒ 15:81544950-81545089   CU861559,CH242-348D16,15:81514178-81645419
(Clone quality: bE348D16 on chr=15; Num_of_Contigs=3; )
ITGA4 location ⇒ 15:81545406-81545530   CU861559,CH242-348D16,15:81514178-81645419
(Clone quality: bE348D16 on chr=15; Num_of_Contigs=3; )
ITGA4 location ⇒ 15:81562022-81562353   CU861559,CH242-348D16,15:81514178-81645419
(Clone quality: bE348D16 on chr=15; Num_of_Contigs=3; )
ITGA5 ENSSSCG00000000293 5:18143068-18165627   CU466514,CH242-63P24,5:18141753-18189023
(Clone quality: bE63P24 on chr=5; Num_of_Contigs=10; )
ITGA5 location ⇒ 5:18143777-18142693   CU466514,CH242-63P24,5:18141753-18189023
(Clone quality: bE63P24 on chr=5; Num_of_Contigs=10; )
ITGA5 location ⇒ 5:18144506-18144381   CU466514,CH242-63P24,5:18141753-18189023
(Clone quality: bE63P24 on chr=5; Num_of_Contigs=10; )
ITGA5 location ⇒ 5:18145123-18145016   CU466514,CH242-63P24,5:18141753-18189023
(Clone quality: bE63P24 on chr=5; Num_of_Contigs=10; )
ITGA5 location ⇒ 5:18145849-18145735   CU466514,CH242-63P24,5:18141753-18189023
(Clone quality: bE63P24 on chr=5; Num_of_Contigs=10; )
ITGA6 ENSSSCG00000015956 15:73539973-73558277    
ITGA6 location ⇒ 15:73540798-73540905   CU469224,CH242-428F9,15:73538662-73549739
(Clone quality: bE428F9 on chr=15; Num_of_Contigs=15; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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