A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IL8 location ⇒ 8:59305978-59306124   CU633185,CH242-328O16,8:59296534-59311008
(Clone quality: bE328O16 on chr=8; Num_of_Contigs=4; )
IL8 location ⇒ 8:59307142-59307278   CU633185,CH242-328O16,8:59296534-59311008
(Clone quality: bE328O16 on chr=8; Num_of_Contigs=4; )
IL8 location ⇒ 8:59308076-59308580   CU633185,CH242-328O16,8:59296534-59311008
(Clone quality: bE328O16 on chr=8; Num_of_Contigs=4; )
IL8 location ⇒ 8:59308618-59308999   CU633185,CH242-328O16,8:59296534-59311008
(Clone quality: bE328O16 on chr=8; Num_of_Contigs=4; )
IL8RA location ⇒ 15:113393459-113394988   CU571033,CH242-277C20,15:113390657-113395069
(Clone quality: bE277C20 on chr=15; Num_of_Contigs=8; )
IL8RA location ⇒ 15:113395170-113395894    
IL8RA location ⇒ 15:113423983-113423347   CU571033,CH242-277C20,15:113406046-113423983
(Clone quality: bE277C20 on chr=15; Num_of_Contigs=8; )
IL8RA location ⇒ 15:113424996-113424084   CU571033,CH242-277C20,15:113424084-113441046
(Clone quality: bE277C20 on chr=15; Num_of_Contigs=8; )
IL8RB location ⇒ 12:17950115-17950046   CU914191,CH242-236G5,12:17933540-17951807
(Clone quality: bE236G5 on chr=12; Num_of_Contigs=14; )
IL8RB location ⇒ 12:17958356-17958289   CU914191,CH242-236G5,12:17956345-17980585
(Clone quality: bE236G5 on chr=12; Num_of_Contigs=14; )
IL8RB location ⇒ 12:18246654-18246585   CU570902,CH242-109J6,12:18227104-18319905
(Clone quality: bE109J6 on chr=12; Num_of_Contigs=7; )
IL8RB location ⇒ 12:18254804-18254737   CU570902,CH242-109J6,12:18227104-18319905
(Clone quality: bE109J6 on chr=12; Num_of_Contigs=7; )
IL9 location ⇒ 2:125439714-125439551   CU928966,CH242-280I22,2:125408617-125488938
(Clone quality: bE280I22 on chr=2; Num_of_Contigs=4; )
IL9 location ⇒ 2:125689326-125689489   FP089688,CH242-222D16,2:125684803-125692587
(Clone quality: bE222D16 on chr=2; Num_of_Contigs=7; )
IL9R ENSSSCG00000007973 3:35184957-35192998   FP103025,CH242-371L21,3:35180882-35196238
(No clone quality info on )
IL9R location ⇒ 3:35188981-35188853   FP103025,CH242-371L21,3:35180882-35196238
(No clone quality info on )
IL9R location ⇒ 3:35189654-35189472   FP103025,CH242-371L21,3:35180882-35196238
(No clone quality info on )
IL9R location ⇒ 3:35190261-35190145   FP103025,CH242-371L21,3:35180882-35196238
(No clone quality info on )
IL9R location ⇒ 3:35192998-35192848   FP103025,CH242-371L21,3:35180882-35196238
(No clone quality info on )
ILDR2 ENSSSCG00000006317 4:87453076-87472490    
ILF1 ENSSSCG00000017125 12:16293-58619 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
ILF1 location ⇒ 12:238480-237608   FP236791,CH242-196C17,12:235597-238507
(Clone quality: bE196C17 on chr=12; Num_of_Contigs=8; )
ILF1 location ⇒ 12:239465-238883   FP236791,CH242-196C17,12:238608-250373
(Clone quality: bE196C17 on chr=12; Num_of_Contigs=8; )
ILF1 location ⇒ 12:5395-3936 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
ILF2 location ⇒ 4:100134839-100134525   CU137691,CH242-31M11,4:100115756-100144233
(Clone quality: bE31M11 on chr=4; Num_of_Contigs=9; )
ILF2 location ⇒ 4:100135561-100135443   CU137691,CH242-31M11,4:100115756-100144233
(Clone quality: bE31M11 on chr=4; Num_of_Contigs=9; )
ILF2 location ⇒ 4:100137578-100137460   CU137691,CH242-31M11,4:100115756-100144233
(Clone quality: bE31M11 on chr=4; Num_of_Contigs=9; )
ILF2 location ⇒ 4:100247765-100248079   CU463867,CH242-10B5,4:100237775-100269080
(Clone quality: bE10B5 on chr=4; Num_of_Contigs=11; )
ILF3 ENSSSCG00000013638 2:52826497-52853641   CU993813,CH242-86K24,2:52825979-52858182
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
ILF3 location ⇒ 2:52832776-52832890   CU993813,CH242-86K24,2:52825979-52858182
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
ILF3 location ⇒ 2:52833459-52833559   CU993813,CH242-86K24,2:52825979-52858182
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
ILF3 location ⇒ 2:52833978-52834090   CU993813,CH242-86K24,2:52825979-52858182
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
ILF3 location ⇒ 2:52836776-52836923   CU993813,CH242-86K24,2:52825979-52858182
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
ILVBL ENSSSCG00000013830 2:60058807-60063355   CU915718,CH242-156C19,2:60006607-60065169
(Clone quality: bE156C19 on chr=2; Num_of_Contigs=6; )
IMMP1L   ENSSSCG00000013322 2:27185618-27261639 CU468610,CH242-385B3,2:27159829-27335365
(Clone quality: bE385B3 on chr=2; Num_of_Contigs=2; ) 		 
IMMP2L   ENSSSCG00000016650 18:32935686-32984912    
IMP3   ENSSSCG00000001876 7:63247819-63248373   CU582918,CH242-27K6,7:63199750-63260944
(Clone quality: bE27K6 on chr=7; Num_of_Contigs=5; )
IMP4   ENSSSCG00000015734 15:28899515-29032001    
IMPAD1 ENSSSCG00000006242 4:78088041-78107410   CU606955,CH242-127N11,4:78086053-78256397
(Clone quality: bE127N11 on chr=4; Num_of_Contigs=1; )
IMPDH1 ENSSSCG00000016585 18:18205683-18221263    
IMPDH2 ENSSSCG00000011372 13:26608686-26613587   CU466318,CH242-524L17,13:26606894-26645646
(Clone quality: bE524L17 on chr=13; Num_of_Contigs=16; )
IMPG1   ENSSSCG00000004476 1:94830614-94841626    
IMPG2   ENSSSCG00000011958 13:115790764-115793124   CU928244,CH242-497L8,13:115778097-115793440
(Clone quality: bE497L8 on chr=13; Num_of_Contigs=4; )
INA   ENSSSCG00000010595 14:119277825-119288604   CT737204,CH242-9O20,14:119192686-119306514
(Clone quality: bE9O20 on chr=14; Num_of_Contigs=4; )
INCA1   ENSSSCG00000017901 12:49122442-49127553   FP015831,CH242-271O18,12:49076321-49169107
(Clone quality: bE271O18 on chr=12; Num_of_Contigs=4; )
INCENP   ENSSSCG00000013066 2:7705239-7706913   FP102181,CH242-239P5,2:7704332-7707060
(Clone quality: bE239P5 on chr=2; Num_of_Contigs=6; )
INDO ENSSSCG00000007007 17:9666698-9681681   CU927892,CH242-110P10,17:9643188-9702145
(Clone quality: bE110P10 on chr=17; Num_of_Contigs=5; )
INDO location ⇒ 17:9508298-9508433   CU633435,CH242-95N15,17:9506378-9509859
(Clone quality: bE95N15 on chr=17; Num_of_Contigs=4; )
INDO location ⇒ 17:9513129-9513252   CU633435,CH242-95N15,17:9509960-9518797
(Clone quality: bE95N15 on chr=17; Num_of_Contigs=4; )
INDO location ⇒ 17:9677019-9676896   CU927892,CH242-110P10,17:9643188-9702145
(Clone quality: bE110P10 on chr=17; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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