A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IL4 ENSSSCG00000003192 6:38455193-38460681   CU694867,CH242-269H19,6:38449667-38488605
(Clone quality: bE269H19 on chr=6; Num_of_Contigs=4; )
IL4 ENSSSCG00000007817 3:17689919-17711751    
IL4 ENSSSCG00000014282 2:122896857-122904405 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL4 location ⇒ 2:122896857-122897014 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL4 location ⇒ 2:122897289-122897339 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL4 location ⇒ 2:122902452-122902579 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL4 location ⇒ 2:122904247-122904347 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL4I1 ENSSSCG00000003192 6:38455193-38460681   CU694867,CH242-269H19,6:38449667-38488605
(Clone quality: bE269H19 on chr=6; Num_of_Contigs=4; )
IL4I1 location ⇒ 6:38455306-38455449   CU694867,CH242-269H19,6:38449667-38488605
(Clone quality: bE269H19 on chr=6; Num_of_Contigs=4; )
IL4I1 location ⇒ 6:38456358-38456473   CU694867,CH242-269H19,6:38449667-38488605
(Clone quality: bE269H19 on chr=6; Num_of_Contigs=4; )
IL4I1 location ⇒ 6:38457058-38457263   CU694867,CH242-269H19,6:38449667-38488605
(Clone quality: bE269H19 on chr=6; Num_of_Contigs=4; )
IL4I1 location ⇒ 6:38459335-38459462   CU694867,CH242-269H19,6:38449667-38488605
(Clone quality: bE269H19 on chr=6; Num_of_Contigs=4; )
IL4R ENSSSCG00000007817 3:17689919-17711751    
IL4R location ⇒ 3:17689917-17690082   CU695068,CH242-516C10,3:17687939-17699609
(Clone quality: bE516C10 on chr=3; Num_of_Contigs=21; )
IL4R location ⇒ 3:17710273-17710876    
IL4R location ⇒ 3:17710993-17711201   CU695068,CH242-516C10,3:17710977-17714128
(Clone quality: bE516C10 on chr=3; Num_of_Contigs=21; )
IL4R location ⇒ 3:17711228-17711751   CU695068,CH242-516C10,3:17710977-17714128
(Clone quality: bE516C10 on chr=3; Num_of_Contigs=21; )
IL5 ENSSSCG00000014278 2:122618051-122619731   CU856105,CH242-342E16,2:122570261-122622064
(Clone quality: bE342E16 on chr=2; Num_of_Contigs=9; )
IL5 location ⇒ 2:122618269-122618051   CU856105,CH242-342E16,2:122570261-122622064
(Clone quality: bE342E16 on chr=2; Num_of_Contigs=9; )
IL5 location ⇒ 2:122618507-122618384   CU856105,CH242-342E16,2:122570261-122622064
(Clone quality: bE342E16 on chr=2; Num_of_Contigs=9; )
IL5 location ⇒ 2:122619731-122619588   CU856105,CH242-342E16,2:122570261-122622064
(Clone quality: bE342E16 on chr=2; Num_of_Contigs=9; )
IL5RA ENSSSCG00000011528 13:50212540-50244569   CU468616,CH242-87P8,13:50208979-50251975
(Clone quality: bE87P8 on chr=13; Num_of_Contigs=5; )
IL5RA location ⇒ 13:50238850-50238677   CU468616,CH242-87P8,13:50208979-50251975
(Clone quality: bE87P8 on chr=13; Num_of_Contigs=5; )
IL5RA location ⇒ 13:50330076-50329903   CU914461,CH242-515D18,13:50328947-50333787
(Clone quality: bE515D18 on chr=13; Num_of_Contigs=16; )
IL6 ENSSSCG00000006276 4:82893775-82894545   CU468820,CH242-166J20,4:82887998-82899500
(Clone quality: bE166J20 on chr=4; Num_of_Contigs=10; )
IL6 ENSSSCG00000015385 9:85801970-85806347   FP102180,CH242-221J19,9:85801568-85808353
(Clone quality: bE221J19 on chr=9; Num_of_Contigs=8; )
IL6 location ⇒ 9:85802190-85802385   FP102180,CH242-221J19,9:85801568-85808353
(Clone quality: bE221J19 on chr=9; Num_of_Contigs=8; )
IL6 location ⇒ 9:85803520-85803636   FP102180,CH242-221J19,9:85801568-85808353
(Clone quality: bE221J19 on chr=9; Num_of_Contigs=8; )
IL6 location ⇒ 9:85804345-85804494   FP102180,CH242-221J19,9:85801568-85808353
(Clone quality: bE221J19 on chr=9; Num_of_Contigs=8; )
IL6 location ⇒ 9:85805764-85806274   FP102180,CH242-221J19,9:85801568-85808353
(Clone quality: bE221J19 on chr=9; Num_of_Contigs=8; )
IL6R location ⇒ 4:99393843-99393597   CU571201,CH242-198A21,4:99380373-99397117
(Clone quality: bE198A21 on chr=4; Num_of_Contigs=15; )
IL6R location ⇒ 4:99428936-99429185   CU571201,CH242-198A21,4:99415721-99431195
(Clone quality: bE198A21 on chr=4; Num_of_Contigs=15; )
IL6R location ⇒ 4:99431562-99431394   CU571201,CH242-198A21,4:99431296-99434434
(Clone quality: bE198A21 on chr=4; Num_of_Contigs=15; )
IL6R location ⇒ 4:99432018-99431837   CU571201,CH242-198A21,4:99431296-99434434
(Clone quality: bE198A21 on chr=4; Num_of_Contigs=15; )
IL6ST ENSSSCG00000016916 16:32637552-32684001    
IL6ST location ⇒ 16:32638280-32637505   CU469029,CH242-408B13,16:32629470-32654305
(Clone quality: bE408B13 on chr=16; Num_of_Contigs=3; )
IL6ST location ⇒ 16:32648572-32648381   CU469029,CH242-408B13,16:32629470-32654305
(Clone quality: bE408B13 on chr=16; Num_of_Contigs=3; )
IL6ST location ⇒ 16:32649429-32649217   CU469029,CH242-408B13,16:32629470-32654305
(Clone quality: bE408B13 on chr=16; Num_of_Contigs=3; )
IL6ST location ⇒ 16:32661197-32660890   CU856062,CH242-70H14,16:32654306-32812494
(Clone quality: bE70H14 on chr=16; Num_of_Contigs=2; )
IL7 ENSSSCG00000006161 4:59739634-59798926    
IL7 location ⇒ 4:59739681-59739919   CU856231,CH242-386C13,4:59699105-59788889
(Clone quality: bE386C13 on chr=4; Num_of_Contigs=2; )
IL7 location ⇒ 4:59747187-59747322   CU856231,CH242-386C13,4:59699105-59788889
(Clone quality: bE386C13 on chr=4; Num_of_Contigs=2; )
IL7 location ⇒ 4:59791936-59792071   CU856231,CH242-386C13,4:59788990-59805392
(Clone quality: bE386C13 on chr=4; Num_of_Contigs=2; )
IL7 location ⇒ 4:59798354-59798533   CU856231,CH242-386C13,4:59788990-59805392
(Clone quality: bE386C13 on chr=4; Num_of_Contigs=2; )
IL7R ENSSSCG00000016832 16:18632640-18662644   CU463889,CH242-401A5,16:18594462-18700254
(Clone quality: bE401A5 on chr=16; Num_of_Contigs=7; )
IL7R location ⇒ 16:18650926-18651049   CU463889,CH242-401A5,16:18594462-18700254
(Clone quality: bE401A5 on chr=16; Num_of_Contigs=7; )
IL7R location ⇒ 16:18656129-18656288   CU463889,CH242-401A5,16:18594462-18700254
(Clone quality: bE401A5 on chr=16; Num_of_Contigs=7; )
IL7R location ⇒ 16:18658995-18659165   CU463889,CH242-401A5,16:18594462-18700254
(Clone quality: bE401A5 on chr=16; Num_of_Contigs=7; )
IL7R location ⇒ 16:18661572-18661748   CU463889,CH242-401A5,16:18594462-18700254
(Clone quality: bE401A5 on chr=16; Num_of_Contigs=7; )
IL8 ENSSSCG00000008953 8:59305978-59309197   CU633185,CH242-328O16,8:59296534-59311008
(Clone quality: bE328O16 on chr=8; Num_of_Contigs=4; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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