A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IL22 ENSSSCG00000000482 5:31819517-31824009    
IL22 location ⇒ 5:31821678-31821628   CU582882,CH242-236H8,5:31821125-31870445
(Clone quality: bE236H8 on chr=5; Num_of_Contigs=7; )
IL22 location ⇒ 5:31822725-31822579   CU582882,CH242-236H8,5:31821125-31870445
(Clone quality: bE236H8 on chr=5; Num_of_Contigs=7; )
IL22RA1 location ⇒ 6:25139-25216   FP102308,CH242-96G18,6:8267-26213
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
IL22RA1 location ⇒ 6:25223-25126   FP102308,CH242-96G18,6:8267-26213
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
IL22RA1 location ⇒ 6:25230-25120   FP102308,CH242-96G18,6:8267-26213
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
IL22RA1 location ⇒ 6:8371-8460   FP102308,CH242-96G18,6:8267-26213
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
IL22RA2 ENSSSCG00000004158 1:28600713-28617035   CU633940,CH242-211F12,1:28551423-28622774
(Clone quality: bE211F12 on chr=1; Num_of_Contigs=6; )
IL22RA2 location ⇒ 1:28609841-28610017   CU633940,CH242-211F12,1:28551423-28622774
(Clone quality: bE211F12 on chr=1; Num_of_Contigs=6; )
IL23A ENSSSCG00000000395 5:20721361-20722926   CU498845,CH242-111P13,5:20718084-20723929
(Clone quality: bE111P13 on chr=5; Num_of_Contigs=18; )
IL23A location ⇒ 5:20723489-20722693   CU498845,CH242-111P13,5:20718084-20723929
(Clone quality: bE111P13 on chr=5; Num_of_Contigs=18; )
IL23R ENSSSCG00000003801 6:102346832-102410187    
IL23R location ⇒ 6:102387175-102387013   CU657931,CH242-314C21,6:102382829-102449861
(Clone quality: bE314C21 on chr=6; Num_of_Contigs=3; )
IL23R location ⇒ 6:102397170-102397047   CU657931,CH242-314C21,6:102382829-102449861
(Clone quality: bE314C21 on chr=6; Num_of_Contigs=3; )
IL23R location ⇒ 6:102404816-102404518   CU657931,CH242-314C21,6:102382829-102449861
(Clone quality: bE314C21 on chr=6; Num_of_Contigs=3; )
IL23R location ⇒ 6:102408975-102408870   CU657931,CH242-314C21,6:102382829-102449861
(Clone quality: bE314C21 on chr=6; Num_of_Contigs=3; )
IL24 ENSSSCG00000015655 9:132068301-132074337    
IL24 location ⇒ 9:132074737-132074394   CU655936,CH242-369P7,9:132070090-132076514
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL25 ENSSSCG00000002030 7:82203373-82206532   CU467584,CH242-430E12,7:82202532-82223278
(Clone quality: bE430E12 on chr=7; Num_of_Contigs=18; )
IL25 ENSSSCG00000002027 7:82100293-82103453   CU633625,CH242-116C14,7:82041923-82116183
(Clone quality: bE116C14 on chr=7; Num_of_Contigs=8; )
IL26 ENSSSCG00000000480 5:31655319-31670071    
IL26 location ⇒ 5:31655362-31655490   CU694828,CH242-167J2,5:31651076-31662005
(Clone quality: bE167J2 on chr=5; Num_of_Contigs=11; )
IL26 location ⇒ 5:31655803-31655865   CU694828,CH242-167J2,5:31651076-31662005
(Clone quality: bE167J2 on chr=5; Num_of_Contigs=11; )
IL27 ENSSSCG00000009272 11:176082-258484    
IL27   location ⇒ 3:54398978-54399001   CU861992,CH242-416P18,3:54380441-54420594
(Clone quality: bE416P18 on chr=3; Num_of_Contigs=10; )
IL27RA ENSSSCG00000013766 2:57019256-57041607   FP086609,CH242-184K22,2:57017365-57071189
(Clone quality: bE184K22 on chr=2; Num_of_Contigs=6; )
IL27RA location ⇒ 2:57041643-57040945   FP086609,CH242-184K22,2:57017365-57071189
(Clone quality: bE184K22 on chr=2; Num_of_Contigs=6; )
IL28A location ⇒ 14:138710248-138710148   FP236263,CH242-159G20,14:138703168-138720557
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
IL28A location ⇒ 14:138710418-138710334   FP236263,CH242-159G20,14:138703168-138720557
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
IL28A location ⇒ 14:138710680-138710532   FP236263,CH242-159G20,14:138703168-138720557
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
IL28A location ⇒ 14:138711466-138711319   FP236263,CH242-159G20,14:138703168-138720557
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
IL28RA location ⇒ 1:187872885-187872960   CU633502,CH242-240C20,1:187832890-187878221
(Clone quality: bE240C20 on chr=1; Num_of_Contigs=4; )
IL28RA location ⇒ 1:188102022-188101947   CU606975,CH242-251A8,1:188088869-188146416
(Clone quality: bE251A8 on chr=1; Num_of_Contigs=5; )
IL29 ENSSSCG00000010711 14:138710148-138711511   FP236263,CH242-159G20,14:138703168-138720557
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
IL2RA location ⇒ 10:61387568-61387456   CU928668,CH242-405N10,10:61378264-61403899
(Clone quality: bE405N10 on chr=10; Num_of_Contigs=13; )
IL2RG ENSSSCG00000012397 X:56853523-56857235   CU468205,CH242-6A14,X:56849541-56908124
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
IL2RG location ⇒ X:56853928-56854085   CU468205,CH242-6A14,X:56849541-56908124
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
IL2RG location ⇒ X:56854311-56854496   CU468205,CH242-6A14,X:56849541-56908124
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
IL2RG location ⇒ X:56855239-56855398   CU468205,CH242-6A14,X:56849541-56908124
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
IL2RG location ⇒ X:56856722-56857230   CU468205,CH242-6A14,X:56849541-56908124
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
IL3 ENSSSCG00000014273 2:122316355-122318098   CU694579,CH242-236B14,2:122309134-122326473
(Clone quality: bE236B14 on chr=2; Num_of_Contigs=4; )
IL31 ENSSSCG00000009795 14:30592119-30593835   CU468822,CH242-327O18,14:30590748-30608060
(Clone quality: bE327O18 on chr=14; Num_of_Contigs=28; )
IL31RA ENSSSCG00000016915 16:32560494-32608590   CU469029,CH242-408B13,16:32547189-32619563
(Clone quality: bE408B13 on chr=16; Num_of_Contigs=3; )
IL31RA location ⇒ 16:32578536-32578422   CU469029,CH242-408B13,16:32547189-32619563
(Clone quality: bE408B13 on chr=16; Num_of_Contigs=3; )
IL32 location ⇒ 7:29098452-29098699 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
IL32 location ⇒ 7:29099142-29099377 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
IL32 location ⇒ 7:70931403-70931566   CT867954,CH242-216K6,7:70902504-70936968
(Clone quality: bE216K6 on chr=7; Num_of_Contigs=4; )
IL32 location ⇒ 7:70943599-70943436   CT867954,CH242-216K6,7:70937069-70944068
(Clone quality: bE216K6 on chr=7; Num_of_Contigs=4; )
IL33 ENSSSCG00000005203 1:225670072-225681731   CU638854,CH242-321A9,1:225658321-225774987
(Clone quality: bE321A9 on chr=1; Num_of_Contigs=3; )
IL34   ENSSSCG00000002727 6:9855824-9858151   CU915803,CH242-220M7,6:9855623-9864094
(Clone quality: bE220M7 on chr=6; Num_of_Contigs=25; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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