A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
THAP7 location ⇒ 14:51689011-51688852   CU633934,CH242-117H20,14:51553625-51738341
(Clone quality: bE117H20 on chr=14; Num_of_Contigs=1; )
THAP7 location ⇒ 14:51689408-51689329   CU633934,CH242-117H20,14:51553625-51738341
(Clone quality: bE117H20 on chr=14; Num_of_Contigs=1; )
THAP8   ENSSSCG00000002922 6:30501517-30512632   CU694686,CH242-213I9,6:30492038-30551165
(Clone quality: bE213I9 on chr=6; Num_of_Contigs=4; )
THAP9   ENSSSCG00000009243 8:116545784-116562884   CU928349,CH242-191M2,8:116538866-116591825
(Clone quality: bE191M2 on chr=8; Num_of_Contigs=4; )
THBD ENSSSCG00000007115 17:31688960-31690699   CU407182,CH242-263H13,17:31645067-31698130
(Clone quality: bE263H13 on chr=17; Num_of_Contigs=6; )
THBD location ⇒ 17:31687587-31687146   CU407182,CH242-263H13,17:31645067-31698130
(Clone quality: bE263H13 on chr=17; Num_of_Contigs=6; )
THBS1 ENSSSCG00000004789 1:138129409-138145238   CU062568,CH242-403O14,1:138095905-138194779
(Clone quality: bE403O14 on chr=1; Num_of_Contigs=6; )
THBS1 location ⇒ 1:138139245-138139072   CU062568,CH242-403O14,1:138095905-138194779
(Clone quality: bE403O14 on chr=1; Num_of_Contigs=6; )
THBS1 location ⇒ 1:138140823-138140727   CU062568,CH242-403O14,1:138095905-138194779
(Clone quality: bE403O14 on chr=1; Num_of_Contigs=6; )
THBS1 location ⇒ 1:138142141-138142018   CU062568,CH242-403O14,1:138095905-138194779
(Clone quality: bE403O14 on chr=1; Num_of_Contigs=6; )
THBS1 location ⇒ 1:138142450-138142251   CU062568,CH242-403O14,1:138095905-138194779
(Clone quality: bE403O14 on chr=1; Num_of_Contigs=6; )
THBS2 ENSSSCG00000004012 1:926901-949670   CU633721,CH242-504P16,1:840865-950063
(Clone quality: bE504P16 on chr=1; Num_of_Contigs=3; )
THBS2 location ⇒ 1:138136581-138136637   CU062568,CH242-403O14,1:138095905-138194779
(Clone quality: bE403O14 on chr=1; Num_of_Contigs=6; )
THBS2 location ⇒ 1:941750-941527   CU633721,CH242-504P16,1:840865-950063
(Clone quality: bE504P16 on chr=1; Num_of_Contigs=3; )
THBS2 location ⇒ 1:944120-943959   CU633721,CH242-504P16,1:840865-950063
(Clone quality: bE504P16 on chr=1; Num_of_Contigs=3; )
THBS2 location ⇒ 1:945533-945414   CU633721,CH242-504P16,1:840865-950063
(Clone quality: bE504P16 on chr=1; Num_of_Contigs=3; )
THBS3 ENSSSCG00000006524 4:98691784-98702944   CU179666,CH242-242M24,4:98685695-98705812
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
THBS3 location ⇒ 4:98700352-98700532   CU179666,CH242-242M24,4:98685695-98705812
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
THBS3 location ⇒ 4:98700856-98701054   CU179666,CH242-242M24,4:98685695-98705812
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
THBS3 location ⇒ 4:98701301-98701476   CU179666,CH242-242M24,4:98685695-98705812
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
THBS3 location ⇒ 4:98702408-98702548   CU179666,CH242-242M24,4:98685695-98705812
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
THBS4 ENSSSCG00000014117 2:77894572-77989554    
THBS4 location ⇒ 2:77969872-77970094   CU914717,CH242-399K18,2:77934120-77977420
(Clone quality: bE399K18 on chr=2; Num_of_Contigs=12; )
THBS4 location ⇒ 2:77974322-77974520   CU914717,CH242-399K18,2:77934120-77977420
(Clone quality: bE399K18 on chr=2; Num_of_Contigs=12; )
THBS4 location ⇒ 2:77985097-77984899   CU929852,CH242-88F3,2:77980519-77993250
(Clone quality: bE88F3 on chr=2; Num_of_Contigs=12; )
THBS4 location ⇒ 2:77989547-77989325   CU929852,CH242-88F3,2:77980519-77993250
(Clone quality: bE88F3 on chr=2; Num_of_Contigs=12; )
THEG   ENSSSCG00000014002 2:67119871-67131317 CU984591,CH242-288L4,2:67104434-67138854
(Clone quality: bE288L4 on chr=2; Num_of_Contigs=6; ) 		 
THEM5   ENSSSCG00000006614 4:101212520-101222091   CU582876,CH242-155P3,4:101202938-101235987
(Clone quality: bE155P3 on chr=4; Num_of_Contigs=6; )
THEMIS ENSSSCG00000004211 1:36982830-36983876   CU896597,CH242-142P1,1:36982031-36989504
(Clone quality: bE142P1 on chr=1; Num_of_Contigs=15; )
THG1L   ENSSSCG00000017049 16:63284613-63291092   CU570950,CH242-337F3,16:63280866-63349326
(Clone quality: bE337F3 on chr=16; Num_of_Contigs=6; )
THNSL1   ENSSSCG00000011071 10:48141385-48154847    
THNSL2   ENSSSCG00000008210 3:52642854-52647908   CU856068,CH242-8G4,3:52642142-52651827
(Clone quality: bE8G4 on chr=3; Num_of_Contigs=15; )
THOC2   ENSSSCG00000012639 X:98948875-99060181    
THOC5   ENSSSCG00000009987 14:47368688-47368783   CU407058,CH242-242C9,14:47366878-47405583
(Clone quality: bE242C9 on chr=14; Num_of_Contigs=6; )
THOC7   ENSSSCG00000011491 13:38131545-38139397   FP102046,CH242-468J9,13:38116116-38147063
(Clone quality: bE468J9 on chr=13; Num_of_Contigs=11; )
THOP1   ENSSSCG00000013468 2:47411223-47430937   CU972376,CH242-107L7,2:47367584-47461889
(Clone quality: bE107L7 on chr=2; Num_of_Contigs=6; )
THRA ENSSSCG00000017480 12:20066410-20115048    
THRA location ⇒ 12:20071875-20072024   FP015991,CH242-327H5,12:20055558-20074746
(Clone quality: bE327H5 on chr=12; Num_of_Contigs=8; )
THRA location ⇒ 12:20072919-20073124   FP015991,CH242-327H5,12:20055558-20074746
(Clone quality: bE327H5 on chr=12; Num_of_Contigs=8; )
THRA location ⇒ 12:20113161-20113421   CU929462,CH242-284N22,12:20112763-20115182
(Clone quality: bE284N22 on chr=12; Num_of_Contigs=12; )
THRA location ⇒ 12:20114258-20114882   CU929462,CH242-284N22,12:20112763-20115182
(Clone quality: bE284N22 on chr=12; Num_of_Contigs=12; )
THRAP3   ENSSSCG00000003636 6:62590107-62636765   CU929602,CH242-252C17,6:62590106-62645199
(Clone quality: bE252C17 on chr=6; Num_of_Contigs=6; )
THRAP4 location ⇒ 12:20153604-20153071   CU929462,CH242-284N22,12:20140316-20189597
(Clone quality: bE284N22 on chr=12; Num_of_Contigs=12; )
THRAP4 location ⇒ 12:20156406-20156140   CU929462,CH242-284N22,12:20140316-20189597
(Clone quality: bE284N22 on chr=12; Num_of_Contigs=12; )
THRAP4 location ⇒ 12:20291397-20291663   CU928026,CH242-256H23,12:20268098-20354915
(Clone quality: bE256H23 on chr=12; Num_of_Contigs=2; )
THRAP4 location ⇒ 12:20294166-20294699   CU928026,CH242-256H23,12:20268098-20354915
(Clone quality: bE256H23 on chr=12; Num_of_Contigs=2; )
THRB   ENSSSCG00000011211 13:9031955-9121645    
THRB_PIG   ENSSSCG00000013252 2:13964296-13990453    
THRB_PIG   ENSSSCG00000013252 2:13964296-13990453    
THRSP ENSSSCG00000014886 9:12326085-12326537   FP089552,CH242-519A4,9:12317853-12330865
(Clone quality: bE519A4 on chr=9; Num_of_Contigs=6; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-8

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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