A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PEVRA_PIG   ENSSSCG00000005908 4:535929-538768   CU468594,CH242-10O17,4:503788-542119
(Clone quality: bE10O17 on chr=4; Num_of_Contigs=10; )
PEX11A   ENSSSCG00000001845 7:60682552-60688846   CT737411,CH242-149F11,7:60651189-60738814
(Clone quality: bE149F11 on chr=7; Num_of_Contigs=3; )
PEX11B   ENSSSCG00000006686 4:103500316-103506534   CU606940,CH242-153I6,4:103497483-103521572
(Clone quality: bE153I6 on chr=4; Num_of_Contigs=12; )
PEX11G   ENSSSCG00000013569 2:50884356-50892023   CU972392,CH242-85F14,2:50883462-50893515
(Clone quality: bE85F14 on chr=2; Num_of_Contigs=25; )
PEX12   ENSSSCG00000017713 12:37736014-37739321   CU927946,CH242-204J8,12:37724810-37778976
(Clone quality: bE204J8 on chr=12; Num_of_Contigs=6; )
PEX13 ENSSSCG00000008387 3:74474538-74505629   CU694829,CH242-168H23,3:74472296-74659530
(Clone quality: bE168H23 on chr=3; Num_of_Contigs=1; )
PEX13 location ⇒ 3:74319848-74319732   CU929569,CH242-112E17,3:74301541-74379263
(Clone quality: bE112E17 on chr=3; Num_of_Contigs=6; )
PEX13 location ⇒ 3:74475309-74474680   CU694829,CH242-168H23,3:74472296-74659530
(Clone quality: bE168H23 on chr=3; Num_of_Contigs=1; )
PEX13 location ⇒ 3:74479172-74479045   CU694829,CH242-168H23,3:74472296-74659530
(Clone quality: bE168H23 on chr=3; Num_of_Contigs=1; )
PEX13 location ⇒ 3:74486553-74485859   CU694829,CH242-168H23,3:74472296-74659530
(Clone quality: bE168H23 on chr=3; Num_of_Contigs=1; )
PEX14   ENSSSCG00000003405 6:47545924-47679556    
PEX16 ENSSSCG00000013267 2:14854637-14860353   FP101987,CH242-521A18,2:14831953-14928280
(Clone quality: bE521A18 on chr=2; Num_of_Contigs=9; )
PEX16 location ⇒ 2:14854644-14854825   FP101987,CH242-521A18,2:14831953-14928280
(Clone quality: bE521A18 on chr=2; Num_of_Contigs=9; )
PEX16 location ⇒ 2:14856281-14856416   FP101987,CH242-521A18,2:14831953-14928280
(Clone quality: bE521A18 on chr=2; Num_of_Contigs=9; )
PEX16 location ⇒ 2:14856553-14856653   FP101987,CH242-521A18,2:14831953-14928280
(Clone quality: bE521A18 on chr=2; Num_of_Contigs=9; )
PEX16 location ⇒ 2:14857642-14857797   FP101987,CH242-521A18,2:14831953-14928280
(Clone quality: bE521A18 on chr=2; Num_of_Contigs=9; )
PEX3 ENSSSCG00000004134 1:22836212-22870511   CU074286,CH242-127C20,1:22835281-23031382
(Clone quality: bE127C20 on chr=1; Num_of_Contigs=1; )
PEX3 location ⇒ 1:22848784-22848613   CU074286,CH242-127C20,1:22835281-23031382
(Clone quality: bE127C20 on chr=1; Num_of_Contigs=1; )
PEX3 location ⇒ 1:22849405-22849350   CU074286,CH242-127C20,1:22835281-23031382
(Clone quality: bE127C20 on chr=1; Num_of_Contigs=1; )
PEX3 location ⇒ 1:22849574-22849511   CU074286,CH242-127C20,1:22835281-23031382
(Clone quality: bE127C20 on chr=1; Num_of_Contigs=1; )
PEX3 location ⇒ 1:22862137-22862004   CU074286,CH242-127C20,1:22835281-23031382
(Clone quality: bE127C20 on chr=1; Num_of_Contigs=1; )
PEX5L   ENSSSCG00000011766 13:89592261-89729263    
PEX6   ENSSSCG00000001653 7:43888180-43899334 CR956379,CH242-196P11,7:43779717-43958428
(No clone quality info on bE196P11) 		 
PEX7   ENSSSCG00000004160 1:28825929-28897262    
PF-1   location ⇒ 13:26044714-26044643   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PF-1   location ⇒ 13:26045010-26044870   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PF-1   location ⇒ 13:26045480-26045382   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PF-2   location ⇒ 13:26044714-26044643   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PF-2   location ⇒ 13:26045010-26044870   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PF-2   location ⇒ 13:26045579-26045382   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PF4 location ⇒ 8:59479858-59479537   CU928337,CH242-266F15,8:59474833-59511571
(Clone quality: bE266F15 on chr=8; Num_of_Contigs=10; )
PF4 location ⇒ 8:59480014-59479887   CU928337,CH242-266F15,8:59474833-59511571
(Clone quality: bE266F15 on chr=8; Num_of_Contigs=10; )
PF4 location ⇒ 8:59480300-59480163   CU928337,CH242-266F15,8:59474833-59511571
(Clone quality: bE266F15 on chr=8; Num_of_Contigs=10; )
PFC ENSSSCG00000012278 X:42114188-42120897   FP015952,CH242-69I19,X:42111786-42120976
(Clone quality: bE69I19 on chr=X; Num_of_Contigs=6; )
PFC location ⇒ X:42114420-42114192   FP015952,CH242-69I19,X:42111786-42120976
(Clone quality: bE69I19 on chr=X; Num_of_Contigs=6; )
PFC location ⇒ X:42116687-42116492   FP015952,CH242-69I19,X:42111786-42120976
(Clone quality: bE69I19 on chr=X; Num_of_Contigs=6; )
PFC location ⇒ X:42117501-42117310   FP015952,CH242-69I19,X:42111786-42120976
(Clone quality: bE69I19 on chr=X; Num_of_Contigs=6; )
PFC location ⇒ X:42118680-42118500   FP015952,CH242-69I19,X:42111786-42120976
(Clone quality: bE69I19 on chr=X; Num_of_Contigs=6; )
PFDN2   ENSSSCG00000006366 4:92835457-92850281   CU463216,CH242-293N2,4:92828593-92858602
(Clone quality: bE293N2 on chr=4; Num_of_Contigs=6; )
PFDN4   ENSSSCG00000007487 17:57386145-57398454 CT009506,CH242-216I3,17:57371608-57477799
(No clone quality info on bE216I3) 		 
PFDN5   ENSSSCG00000000266 5:17053384-17057433    
PFDN6   ENSSSCG00000001505 7:34061041-34062303 CU607018,CH242-138E20,7:33930957-34116846
(Clone quality: bE138E20 on chr=7; Num_of_Contigs=1; ) 		 
PFKFB1   ENSSSCG00000012345 X:47461230-47513903   CU856438,CH242-133L21,X:47452437-47526061
(Clone quality: bE133L21 on chr=X; Num_of_Contigs=8; )
PFKFB2   ENSSSCG00000015660 9:132210258-132230912    
PFKFB4   ENSSSCG00000011353 13:26116917-26158434   CU633242,CH242-208G16,13:26093504-26215489
(Clone quality: bE208G16 on chr=13; Num_of_Contigs=5; )
PFKP   ENSSSCG00000011158 10:63322046-63343648   CU861620,CH242-32E14,10:63315156-63343894
(Clone quality: bE32E14 on chr=10; Num_of_Contigs=11; )
PFN1   ENSSSCG00000017905 12:49158464-49161394   FP015831,CH242-271O18,12:49076321-49169107
(Clone quality: bE271O18 on chr=12; Num_of_Contigs=4; )
PFN3   ENSSSCG00000012370 X:52328293-52328700   CU606949,CH242-297K21,X:52325615-52355571
(Clone quality: bE297K21 on chr=X; Num_of_Contigs=7; )
PFN4   ENSSSCG00000008585 3:106735277-106741285   CU928810,CH242-168M14,3:106726050-106748665
(Clone quality: bE168M14 on chr=3; Num_of_Contigs=3; )
PFTK1   ENSSSCG00000015307 9:66157728-66726769    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-1900, 1901-1950, 1951-2000, 2001-2050, 2051-2100, 2101-2150, 2151-2200, 2201-21

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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