A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
NLRC4 location ⇒ 3:35364-35429   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
NLRP10 location ⇒ 11:1495245-1495160   CU929510,CH242-273A16,11:1455054-1520978
(Clone quality: bE273A16 on chr=11; Num_of_Contigs=4; )
NLRP10 location ⇒ 11:1714887-1714802   CU062605,CH242-86L16,11:1712947-1720194
(Clone quality: bE86L16 on chr=11; Num_of_Contigs=9; )
NLRP10 location ⇒ 11:1775017-1775102   CU633467,CH242-134D18,11:1741183-1806334
(Clone quality: bE134D18 on chr=11; Num_of_Contigs=6; )
NLRP10 location ⇒ 11:2034054-2034147   FP236535,CH242-504P8,11:2016739-2039047
(Clone quality: bE504P8 on chr=11; Num_of_Contigs=13; )
NLRP11 ENSSSCG00000003314 6:41912292-41914574   FP236123,CH242-107C1,6:41907891-41917012
(Clone quality: bE107C1 on chr=6; Num_of_Contigs=14; )
NLRP11 location ⇒ 6:41899545-41899485   FP236123,CH242-107C1,6:41897439-41901758
(Clone quality: bE107C1 on chr=6; Num_of_Contigs=14; )
NLRP2 location ⇒ 6:40829936-40829870 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2) 		 
NLRP2 location ⇒ 6:40834213-40834126 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2) 		 
NLRP2 location ⇒ 6:41150702-41150636   FP102421,CH242-120N16,6:41147540-41161728
(Clone quality: bE120N16 on chr=6; Num_of_Contigs=6; )
NLRP2 location ⇒ 6:41154979-41154892   FP102421,CH242-120N16,6:41147540-41161728
(Clone quality: bE120N16 on chr=6; Num_of_Contigs=6; )
NLRP3 ENSSSCG00000013940 2:63853146-63860552   CU694944,CH242-8E21,2:63851105-63883829
(Clone quality: bE8E21 on chr=2; Num_of_Contigs=5; )
NLRP4 ENSSSCG00000003312 6:41801395-41870667    
NLRP5 ENSSSCG00000003316 6:42051248-42084166    
NLRP6 ENSSSCG00000014561 2:139895169-139900818   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
NLRP6 location ⇒ 2:139895175-139895421   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
NLRP6 location ⇒ 2:139896004-139897412   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
NLRP6 location ⇒ 2:139899854-139900018   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
NLRP8 ENSSSCG00000003315 6:42020462-42039987   FP102565,CH242-147D16,6:41995569-42057420
(Clone quality: bE147D16 on chr=6; Num_of_Contigs=7; )
NLRP9 ENSSSCG00000003307 6:41583370-41608223   FP102633,CH242-224A10,6:41540733-41608543
(Clone quality: bE224A10 on chr=6; Num_of_Contigs=3; )
NLRX1 ENSSSCG00000015114 9:44999418-45012768   CU639481,CH242-263G17,9:44899832-45096295
(Clone quality: bE263G17 on chr=9; Num_of_Contigs=2; )
NLRX1 location ⇒ 9:45003289-45003616   CU639481,CH242-263G17,9:44899832-45096295
(Clone quality: bE263G17 on chr=9; Num_of_Contigs=2; )
NLRX1 location ⇒ 9:45009601-45009805   CU639481,CH242-263G17,9:44899832-45096295
(Clone quality: bE263G17 on chr=9; Num_of_Contigs=2; )
NMBR   ENSSSCG00000004141 1:24225077-24240394    
NME1 location ⇒ 12:25083617-25083743   CU929012,CH242-205C11,12:25005952-25086974
(Clone quality: bE205C11 on chr=12; Num_of_Contigs=7; )
NME1 location ⇒ 12:25084791-25084897   CU929012,CH242-205C11,12:25005952-25086974
(Clone quality: bE205C11 on chr=12; Num_of_Contigs=7; )
NME1 location ⇒ 12:25087703-25087817   CU929012,CH242-205C11,12:25087075-25089714
(Clone quality: bE205C11 on chr=12; Num_of_Contigs=7; )
NME1 location ⇒ 12:25088860-25088979   CU929012,CH242-205C11,12:25087075-25089714
(Clone quality: bE205C11 on chr=12; Num_of_Contigs=7; )
NME1-NME2   ENSSSCG00000017591 12:25059937-25089119    
NME3 ENSSSCG00000008017 3:35926495-35927730   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
NME3 location ⇒ 3:35926638-35926778   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
NME3 location ⇒ 3:35926899-35927005   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
NME3 location ⇒ 3:35927079-35927193   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
NME3 location ⇒ 3:35927280-35927727   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
NME4   ENSSSCG00000007986 3:35447664-35460543    
NME6 ENSSSCG00000011347 13:25946354-25951160   FP102065,CH242-145E9,13:25944867-25960134
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NME6 ENSSSCG00000011347 13:25946354-25951160   FP102065,CH242-145E9,13:25944867-25960134
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NMNAT1   ENSSSCG00000003400 6:47378315-47383707   FP104527,CH242-112N24,6:47366673-47384357
(Clone quality: bE112N24 on chr=6; Num_of_Contigs=12; )
NMNAT2   ENSSSCG00000015557 9:116816499-116846798    
NMNAT3   ENSSSCG00000011665 13:65523103-65536863   CU463220,CH242-387J19,13:65518427-65558302
(Clone quality: bE387J19 on chr=13; Num_of_Contigs=6; )
NMRAL1   ENSSSCG00000007943 3:33889836-33896874    
NMS   ENSSSCG00000008173 3:49487936-49500709    
NMT1   ENSSSCG00000017339 12:16172801-16202371    
NMU ENSSSCG00000008907 8:47618086-47692809    
NMU ENSSSCG00000017076 16:67830738-67843365   FP236444,CH242-290L20,16:67829016-67850049
(Clone quality: bE290L20 on chr=16; Num_of_Contigs=6; )
NMUR1   ENSSSCG00000016277 15:124535513-124539840   CU856676,CH242-83A8,15:124506558-124567178
(Clone quality: bE83A8 on chr=15; Num_of_Contigs=8; )
NMUR2   ENSSSCG00000017076 16:67830738-67843365   FP236444,CH242-290L20,16:67829016-67850049
(Clone quality: bE290L20 on chr=16; Num_of_Contigs=6; )
NNAT   ENSSSCG00000007336 17:42973883-42976133   CU024884,CH242-24B10,17:42961281-43020437
(Clone quality: bE24B10 on chr=17; Num_of_Contigs=8; )
NNMT_PIG   ENSSSCG00000015054 9:40582495-40584789   CU469234,CH242-491D8,9:40582081-40586002
(Clone quality: bE491D8 on chr=9; Num_of_Contigs=26; )
NNT   ENSSSCG00000016877 16:25409590-25459558   CU856258,CH242-143B14,16:25401043-25515192
(Clone quality: bE143B14 on chr=16; Num_of_Contigs=4; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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