A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
DNAJC5B   ENSSSCG00000006217 4:71147098-71230561   CU550675,CH242-329I16,4:71045167-71242427
(Clone quality: bE329I16 on chr=4; Num_of_Contigs=1; )
DNAJC6   ENSSSCG00000003807 6:103479879-103642844    
DNAJC7 ENSSSCG00000017419 12:18458466-18488732   CU856598,CH242-362F6,12:18453794-18511165
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
DNAJC8   ENSSSCG00000003626 6:62043511-62047903   FP236290,CH242-238K2,6:62036358-62049571
(Clone quality: bE238K2 on chr=6; Num_of_Contigs=9; )
DNAJC9 ENSSSCG00000010296 14:79326400-79331368   CU639423,CH242-167H24,14:79290725-79348720
(Clone quality: bE167H24 on chr=14; Num_of_Contigs=3; )
DNAJC9 location ⇒ 14:79327127-79326870   CU639423,CH242-167H24,14:79290725-79348720
(Clone quality: bE167H24 on chr=14; Num_of_Contigs=3; )
DNAJC9 location ⇒ 14:79330135-79329878   CU639423,CH242-167H24,14:79290725-79348720
(Clone quality: bE167H24 on chr=14; Num_of_Contigs=3; )
DNAJC9 location ⇒ 14:79330902-79330759   CU639423,CH242-167H24,14:79290725-79348720
(Clone quality: bE167H24 on chr=14; Num_of_Contigs=3; )
DNAJC9 location ⇒ 14:79331253-79331073   CU639423,CH242-167H24,14:79290725-79348720
(Clone quality: bE167H24 on chr=14; Num_of_Contigs=3; )
DNAL1   ENSSSCG00000002347 7:104951082-104980073   CT943655,CH242-523I15,7:104924151-105020426
(Clone quality: bE523I15 on chr=7; Num_of_Contigs=3; )
DNAL4   ENSSSCG00000000093 5:5439045-5450464   CU655907,CH242-193M24,5:5436722-5459629
(Clone quality: bE193M24 on chr=5; Num_of_Contigs=6; )
DNASE1 ENSSSCG00000007953 3:34602177-34605268   CU914336,CH242-210P22,3:34597748-34618882
(Clone quality: bE210P22 on chr=3; Num_of_Contigs=7; )
DNASE1 location ⇒ 3:34602552-34602170   CU914336,CH242-210P22,3:34597748-34618882
(Clone quality: bE210P22 on chr=3; Num_of_Contigs=7; )
DNASE1 location ⇒ 3:34603403-34603246   CU914336,CH242-210P22,3:34597748-34618882
(Clone quality: bE210P22 on chr=3; Num_of_Contigs=7; )
DNASE1 location ⇒ 3:34603824-34603706   CU914336,CH242-210P22,3:34597748-34618882
(Clone quality: bE210P22 on chr=3; Num_of_Contigs=7; )
DNASE1 location ⇒ 3:34605006-34604751   CU914336,CH242-210P22,3:34597748-34618882
(Clone quality: bE210P22 on chr=3; Num_of_Contigs=7; )
DNASE1L3   ENSSSCG00000011472 13:33627826-33632560   CU855562,CH242-255O5,13:33627089-33650628
(Clone quality: bE255O5 on chr=13; Num_of_Contigs=9; )
DNASE2 ENSSSCG00000013731 2:56013371-56016339   CU914382,CH242-275M24,2:55996730-56024973
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
DNASE2 location ⇒ 2:56013548-56013737   CU914382,CH242-275M24,2:55996730-56024973
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
DNASE2 location ⇒ 2:56013825-56014003   CU914382,CH242-275M24,2:55996730-56024973
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
DNASE2 location ⇒ 2:56014966-56015163   CU914382,CH242-275M24,2:55996730-56024973
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
DNASE2 location ⇒ 2:56015796-56016333   CU914382,CH242-275M24,2:55996730-56024973
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
DND1   ENSSSCG00000014374 2:129393401-129395583   CU459055,CH242-430O11,2:129383345-129419222
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
DNER   ENSSSCG00000016258 15:123319114-123347005    
DNM1   ENSSSCG00000005641 1:283287612-283336151   CU234126,CH242-282L14,1:283270038-283452033
(Clone quality: bE282L14 on chr=1; Num_of_Contigs=4; )
DNM1L   ENSSSCG00000000529 5:40733031-40761852    
DNM1P17   ENSSSCG00000011018 10:38892662-38917152    
DNM2   ENSSSCG00000013630 2:52668722-52699062   CU928849,CH242-1G23,2:52653544-52705251
(Clone quality: bE1G23 on chr=2; Num_of_Contigs=8; )
DNM3   ENSSSCG00000015484 9:107370370-107427187    
DNMBP   ENSSSCG00000010544 14:115805958-115889777    
DNMT1 location ⇒ 2:53271021-53271306   CU657936,CH242-239H17,2:53259434-53277725
(Clone quality: bE239H17 on chr=2; Num_of_Contigs=8; )
DNMT1 location ⇒ 2:53276285-53276627   CU657936,CH242-239H17,2:53259434-53277725
(Clone quality: bE239H17 on chr=2; Num_of_Contigs=8; )
DNMT1 location ⇒ 2:53373577-53373862   CU462940,CH242-319N14,2:53308800-53390755
(Clone quality: bE319N14 on chr=2; Num_of_Contigs=3; )
DNMT1 location ⇒ 2:53378841-53379183   CU462940,CH242-319N14,2:53308800-53390755
(Clone quality: bE319N14 on chr=2; Num_of_Contigs=3; )
DNMT3B   ENSSSCG00000007252 17:38365920-38389646   CU179704,CH242-134M1,17:38326500-38527268
(Clone quality: bE134M1 on chr=17; Num_of_Contigs=1; )
DNPEP   ENSSSCG00000016220 15:114386348-114399067    
DNTT ENSSSCG00000010505 14:112807695-112841436    
DNTT location ⇒ 14:112823097-112822968   CU424484,CH242-268F22,14:112811143-112834334
(Clone quality: bE268F22 on chr=14; Num_of_Contigs=10; )
DNTT location ⇒ 14:112824472-112824300   CU424484,CH242-268F22,14:112811143-112834334
(Clone quality: bE268F22 on chr=14; Num_of_Contigs=10; )
DNTT location ⇒ 14:112827819-112827695   CU424484,CH242-268F22,14:112811143-112834334
(Clone quality: bE268F22 on chr=14; Num_of_Contigs=10; )
DNTT location ⇒ 14:112829817-112829717   CU424484,CH242-268F22,14:112811143-112834334
(Clone quality: bE268F22 on chr=14; Num_of_Contigs=10; )
DNTTIP1   ENSSSCG00000007422 17:50058825-50081735   CU076086,CH242-56C16,17:49960216-50115189
(Clone quality: bE56C16 on chr=17; Num_of_Contigs=2; )
DNTTIP2   ENSSSCG00000006892 4:127690915-127704329   CU582963,CH242-133N10,4:127667298-127798755
(Clone quality: bE133N10 on chr=4; Num_of_Contigs=2; )
DOCK1 ENSSSCG00000010748 14:143384673-143470128    
DOCK1 location ⇒ 14:143640754-143640686   CU468206,CH242-74L9,14:143613166-143706704
(Clone quality: bE74L9 on chr=14; Num_of_Contigs=6; )
DOCK1 location ⇒ 14:143658387-143658258   CU468206,CH242-74L9,14:143613166-143706704
(Clone quality: bE74L9 on chr=14; Num_of_Contigs=6; )
DOCK1 location ⇒ 14:143660095-143659998   CU468206,CH242-74L9,14:143613166-143706704
(Clone quality: bE74L9 on chr=14; Num_of_Contigs=6; )
DOCK10   ENSSSCG00000016237 15:118970632-119121700    
DOCK11   ENSSSCG00000012634 X:97286919-97425607    
DOCK2 ENSSSCG00000017008 16:51114481-51600342    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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