A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
NIPAL4   ENSSSCG00000017053 16:63500113-63512107   CU638679,CH242-277N21,16:63418847-63575815
(Clone quality: bE277N21 on chr=16; Num_of_Contigs=1; )
NIPBL   ENSSSCG00000016842 16:19743840-19865445    
NIPSNAP1   ENSSSCG00000009988 14:47372906-47389233   CU407058,CH242-242C9,14:47366878-47405583
(Clone quality: bE242C9 on chr=14; Num_of_Contigs=6; )
NISCH   ENSSSCG00000011442 13:29210303-29231088   CU550676,CH242-330J9,13:29135788-29268883
(Clone quality: bE330J9 on chr=13; Num_of_Contigs=4; )
NIT1   ENSSSCG00000006365 4:92832268-92835453   CU463216,CH242-293N2,4:92828593-92858602
(Clone quality: bE293N2 on chr=4; Num_of_Contigs=6; )
NIT2   ENSSSCG00000011968 13:116756853-116776650    
NK-1 ENSSSCG00000015259 9:59287480-59384534    
NKAIN1   ENSSSCG00000003593 6:60102174-60108611   CU929742,CH242-256M11,6:60068334-60142661
(Clone quality: bE256M11 on chr=6; Num_of_Contigs=3; )
NKAIN3   ENSSSCG00000006228 4:73743009-74080196    
NKAP   ENSSSCG00000012613 X:96336887-96357440 CU929805,CH242-458G8,X:96325902-96366866
(Clone quality: bE458G8 on chr=X; Num_of_Contigs=7; ) 		 
NKAPL   ENSSSCG00000001205 7:23667120-23668337 CU062578,CH242-485A8,7:23636539-23857828
(Clone quality: bE485A8 on chr=7; Num_of_Contigs=2; ) 		 
NKG7 ENSSSCG00000003231 6:39400034-39401770   CU694842,CH242-204P3,6:39384038-39444131
(Clone quality: bE204P3 on chr=6; Num_of_Contigs=6; )
NKIRAS2   ENSSSCG00000017418 12:18451567-18455268    
NKRF ENSSSCG00000012620 X:96612543-96614501   CU467108,CH242-78C24,X:96611677-96643719
(Clone quality: bE78C24 on chr=X; Num_of_Contigs=9; )
NKRF location ⇒ X:13121-13056   FP236733,PigE-245C13,X:5383-52328
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
NKRF location ⇒ X:1316-1251   FP236733,PigE-245C13,X:1-2951
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
NKRF location ⇒ X:16997-17106   FP236733,PigE-245C13,X:5383-52328
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
NKRF location ⇒ X:5619-5554   FP236733,PigE-245C13,X:5383-52328
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
NKTR   ENSSSCG00000011281 13:21920714-21932365   CU607093,CH242-384H20,13:21911604-21934179
(Clone quality: bE384H20 on chr=13; Num_of_Contigs=13; )
NKX1-1   ENSSSCG00000010733 14:140668467-140671021   CU468348,CH242-366L11,14:140645129-140680074
(Clone quality: bE366L11 on chr=14; Num_of_Contigs=5; )
NKX2-1 ENSSSCG00000001945 7:69563689-69566479   CU326398,CH242-80C2,7:69560032-69575260
(Clone quality: bE80C2 on chr=7; Num_of_Contigs=2; )
NKX2-3 ENSSSCG00000010538 14:115483488-115483955   CT827848,CH242-276N12,14:115431518-115501704
(Clone quality: bE276N12 on chr=14; Num_of_Contigs=5; )
NKX2-3 location ⇒ 14:115470507-115470728   CT827848,CH242-276N12,14:115431518-115501704
(Clone quality: bE276N12 on chr=14; Num_of_Contigs=5; )
NKX2-3 location ⇒ 14:115483456-115483804   CT827848,CH242-276N12,14:115431518-115501704
(Clone quality: bE276N12 on chr=14; Num_of_Contigs=5; )
NKX2-4   ENSSSCG00000007110 17:30417371-30418479    
NKX2-5 ENSSSCG00000016984 16:48435113-48437716   CU928102,CH242-282H22,16:48385360-48486838
(Clone quality: bE282H22 on chr=16; Num_of_Contigs=5; )
NKX2-5 location ⇒ 16:48435130-48435584   CU928102,CH242-282H22,16:48385360-48486838
(Clone quality: bE282H22 on chr=16; Num_of_Contigs=5; )
NKX2-5 location ⇒ 16:48437074-48437361   CU928102,CH242-282H22,16:48385360-48486838
(Clone quality: bE282H22 on chr=16; Num_of_Contigs=5; )
NKX2-5 location ⇒ 16:48437390-48437475   CU928102,CH242-282H22,16:48385360-48486838
(Clone quality: bE282H22 on chr=16; Num_of_Contigs=5; )
NKX2-8 ENSSSCG00000001944 7:69499862-69501257 CT757474,CH242-197D7,7:69416586-69560031
(Clone quality: bE197D7 on chr=7; Num_of_Contigs=1; ) 		 
NKX6-1   ENSSSCG00000009232 8:115416373-115418897   CU694618,CH242-3M17,8:115416143-115420348
(Clone quality: bE3M17 on chr=8; Num_of_Contigs=8; )
NKX6-3   ENSSSCG00000007018 17:10722257-10725812    
NLGN1 ENSSSCG00000011756 13:85501131-85507341   CU861914,CH242-131L1,13:85499791-85523140
(Clone quality: bE131L1 on chr=13; Num_of_Contigs=4; )
NLGN2 location ⇒ X:56803353-56803497 FP102080,CH242-239N4,X:56731395-56804170
(Clone quality: bE239N4 on chr=X; Num_of_Contigs=2; ) 		 
NLGN3 ENSSSCG00000012395 X:56801335-56821904    
NLGN3 location ⇒ X:56822015-56821575   CU468205,CH242-6A14,X:56804171-56849440
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
NLGN3 location ⇒ X:56824649-56824545   CU468205,CH242-6A14,X:56804171-56849440
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
NLGN4X ENSSSCG00000012097 X:2289528-2308541 FP067403,CH242-212L20,X:2263862-2375275
(Clone quality: bE212L20 on chr=X; Num_of_Contigs=2; ) 		 
NLGN4X location ⇒ X:2290157-2289575 FP067403,CH242-212L20,X:2263862-2375275
(Clone quality: bE212L20 on chr=X; Num_of_Contigs=2; ) 		 
NLK ENSSSCG00000003730 6:80240626-80287311    
NLK ENSSSCG00000017756 12:42234889-42428827    
NLK ENSSSCG00000002873 6:29417869-29445007    
NLK location ⇒ 12:42235044-42235353   CU856701,CH242-327O19,12:42167254-42316869
(Clone quality: bE327O19 on chr=12; Num_of_Contigs=2; )
NLK location ⇒ 12:42327898-42328244   CU927944,CH242-195G7,12:42321494-42331835
(Clone quality: bE195G7 on chr=12; Num_of_Contigs=8; )
NLK location ⇒ 12:42328330-42328837   CU927944,CH242-195G7,12:42321494-42331835
(Clone quality: bE195G7 on chr=12; Num_of_Contigs=8; )
NLK location ⇒ 12:42328892-42329685   CU927944,CH242-195G7,12:42321494-42331835
(Clone quality: bE195G7 on chr=12; Num_of_Contigs=8; )
NLRC3 ENSSSCG00000007956 3:34727824-34746450   CU914336,CH242-210P22,3:34706583-34755073
(Clone quality: bE210P22 on chr=3; Num_of_Contigs=7; )
NLRC4 location ⇒ 3:16084-15975   FP102618,CH242-1B21,3:10473-20929
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
NLRC4 location ⇒ 3:27717-27600   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
NLRC4 location ⇒ 3:27719-27622   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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