A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
DMRTC2   ENSSSCG00000003043 6:34633113-34637142   FP015926,CH242-183C8,6:34614693-34644455
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
DMTF1 ENSSSCG00000015393 9:87098122-87142570    
DMTF1 location ⇒ 9:87099877-87099499   CU464022,CH242-96H15,9:87068725-87124706
(Clone quality: bE96H15 on chr=9; Num_of_Contigs=4; )
DMTF1 location ⇒ 9:87100592-87100438   CU464022,CH242-96H15,9:87068725-87124706
(Clone quality: bE96H15 on chr=9; Num_of_Contigs=4; )
DMTF1 location ⇒ 9:87109542-87109310   CU464022,CH242-96H15,9:87068725-87124706
(Clone quality: bE96H15 on chr=9; Num_of_Contigs=4; )
DMTF1 location ⇒ 9:87113899-87113740   CU464022,CH242-96H15,9:87068725-87124706
(Clone quality: bE96H15 on chr=9; Num_of_Contigs=4; )
DMXL1   ENSSSCG00000014226 2:111513088-111513597   CU855680,CH242-87O6,2:111503618-111515754
(Clone quality: bE87O6 on chr=2; Num_of_Contigs=8; )
DMXL2   ENSSSCG00000004631 1:125241287-125313638    
DNA2   ENSSSCG00000010240 14:74573299-74766025    
DNAH10   ENSSSCG00000009765 14:29194827-29306991    
DNAH11   ENSSSCG00000015379 9:84678801-84945458    
DNAH2   ENSSSCG00000017963 12:50118863-50409929    
DNAH6   ENSSSCG00000008244 3:54602649-54654857    
DNAH7   ENSSSCG00000016066 15:93279661-93482473    
DNAH8   ENSSSCG00000001588 7:39153770-39437066    
DNAH9   ENSSSCG00000018015 12:53327489-53415790    
DNAI1   ENSSSCG00000010977 10:30723956-30739079   CU928717,CH242-142N10,10:30722030-30740297
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
DNAJA1   ENSSSCG00000011000 10:31955775-31967903   CU929631,CH242-359M22,10:31926902-32001519
(Clone quality: bE359M22 on chr=10; Num_of_Contigs=3; )
DNAJA2 ENSSSCG00000002846 6:25313215-25326229   FP085497,CH242-185I6,6:25285674-25454519
(Clone quality: bE185I6 on chr=6; Num_of_Contigs=1; )
DNAJA2 ENSSSCG00000002846 6:25313215-25326229   FP085497,CH242-185I6,6:25285674-25454519
(Clone quality: bE185I6 on chr=6; Num_of_Contigs=1; )
DNAJA4   ENSSSCG00000001759 7:53684849-53699852   CU467054,CH242-222N19,7:53664834-53710059
(Clone quality: bE222N19 on chr=7; Num_of_Contigs=8; )
DNAJB1   ENSSSCG00000013784 2:57313679-57317029    
DNAJB11   ENSSSCG00000011798 13:93990036-94009031   CU466376,CH242-17J7,13:93934222-94016715
(Clone quality: bE17J7 on chr=13; Num_of_Contigs=6; )
DNAJB12   ENSSSCG00000010288 14:78396424-78415643   CU607002,CH242-299J16,14:78378239-78444593
(Clone quality: bE299J16 on chr=14; Num_of_Contigs=5; )
DNAJB13   ENSSSCG00000014832 9:8024963-8037749   CU855642,CH242-23A3,9:8000921-8112286
(Clone quality: bE23A3 on chr=9; Num_of_Contigs=4; )
DNAJB14   ENSSSCG00000009177 8:103316645-103367723    
DNAJB2   ENSSSCG00000016217 15:114316555-114322140   CU457453,CH242-470M7,15:114314554-114348461
(Clone quality: bE470M7 on chr=15; Num_of_Contigs=11; )
DNAJB4   ENSSSCG00000003766 6:94264483-94301002   CU695021,CH242-121C3,6:94237289-94340991
(Clone quality: bE121C3 on chr=6; Num_of_Contigs=5; )
DNAJB5   ENSSSCG00000005297 1:246821330-246828910    
DNAJB6   ENSSSCG00000016408 18:543295-579792   FP236580,CH242-203A7,18:537150-580185
(Clone quality: bE203A7 on chr=18; Num_of_Contigs=16; )
DNAJB8   ENSSSCG00000011617 13:59417915-59418610   CU915317,CH242-211J16,13:59416700-59442075
(Clone quality: bE211J16 on chr=13; Num_of_Contigs=17; )
DNAJB9   ENSSSCG00000016653 18:35819833-35823678   CU466952,CH242-160D13,18:35781855-35933165
(Clone quality: bE160D13 on chr=18; Num_of_Contigs=5; )
DNAJC1   ENSSSCG00000011083 10:50433257-50536037   CU861947,CH242-218A19,10:50419474-50537873
(Clone quality: bE218A19 on chr=10; Num_of_Contigs=4; )
DNAJC10   ENSSSCG00000016017 15:82827666-82873653   CU855488,CH242-125O7,15:82826275-82974380
(Clone quality: bE125O7 on chr=15; Num_of_Contigs=1; )
DNAJC11   ENSSSCG00000003384 6:45925212-45929416   FP236215,CH242-289B8,6:45924758-45932371
(Clone quality: bE289B8 on chr=6; Num_of_Contigs=13; )
DNAJC12   ENSSSCG00000010233 14:74134164-74169997   CT997807,CH242-507P18,14:74104999-74249590
(Clone quality: bE507P18 on chr=14; Num_of_Contigs=4; )
DNAJC13   ENSSSCG00000011628 13:60410825-60519221    
DNAJC14   ENSSSCG00000000366 5:20216974-20224159 CU606916,CH242-141C7,5:20096881-20252808
(Clone quality: bE141C7 on chr=5; Num_of_Contigs=1; ) 		 
DNAJC15   ENSSSCG00000009427 11:23017679-23100036    
DNAJC16   ENSSSCG00000003464 6:51375511-51408636    
DNAJC17   ENSSSCG00000004762 1:137013646-137056321   CU633257,CH242-257P7,1:137003112-137140964
(Clone quality: bE257P7 on chr=1; Num_of_Contigs=3; )
DNAJC18   ENSSSCG00000014356 2:128526215-128542365   FP102079,CH242-22H3,2:128522439-128543585
(Clone quality: bE22H3 on chr=2; Num_of_Contigs=6; )
DNAJC19   ENSSSCG00000011770 13:90638327-90644298   CU466540,CH242-505D6,13:90635587-90645691
(Clone quality: bE505D6 on chr=13; Num_of_Contigs=17; )
DNAJC2   ENSSSCG00000015423 9:96372300-96401935   CU570825,CH242-232P7,9:96290209-96447239
(Clone quality: bE232P7 on chr=9; Num_of_Contigs=1; )
DNAJC21   ENSSSCG00000016828 16:18061482-18089655   CU914241,CH242-186I1,16:17966592-18131621
(Clone quality: bE186I1 on chr=16; Num_of_Contigs=2; )
DNAJC22   ENSSSCG00000000198 5:14070827-14086673    
DNAJC24   ENSSSCG00000013323 2:27262403-27344741    
DNAJC27   ENSSSCG00000008577 3:105977021-106013429    
DNAJC30   ENSSSCG00000007712 3:9280159-9280839   CU655977,CH242-166N19,3:9275764-9314897
(Clone quality: bE166N19 on chr=3; Num_of_Contigs=8; )
DNAJC4   ENSSSCG00000013038 2:6261167-6264995   CU861533,CH242-1H13,2:6260833-6266680
(Clone quality: bE1H13 on chr=2; Num_of_Contigs=14; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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