Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 9701 - 9800:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig09701 ---NA--- 356 0     0      
contig09702 ---NA--- 253 0     0      
contig09703 ---NA--- 953 0     0      
contig09704 acyl- synthetase long-chain family member 4 313 20 3.54E-28 92.15% 1 P:metabolic process    
contig09705 chromodomain helicase dna binding protein 4 538 20 8.11E-20 98.30% 11 F:zinc ion binding; P:zinc ion transport; F:ATP-dependent helicase activity; P:chromatin assembly or disassembly; P:regulation of transcription; F:DNA binding; F:ATP binding; C:chromatin; F:transcription factor binding; F:chromatin binding; C:nucleus    
contig09706 spermatogenesis associated 13 292 20 2.93E-33 79.50% 3 P:regulation of Rho protein signal transduction; C:intracellular; F:Rho guanyl-nucleotide exchange factor activity    
contig09707 secernin 2 290 20 1.25E-36 77.60% 1 F:dipeptidase activity EC:3.4.13.0  
contig09708 ---NA--- 427 0     0      
contig09709 ---NA--- 158 0     0      
contig09710 atp synthase lipid-binding mitochondrial precursor 483 20 2.21E-47 94.70% 6 F:lipid binding; C:proton-transporting ATP synthase complex, coupling factor F(o); P:transport; C:integral to membrane; F:proton-transporting ATPase activity, rotational mechanism; F:hydrogen ion transporting ATP synthase activity, rotational mechanism EC:3.6.3.14  
contig09711 ---NA--- 772 0     0      
contig09712 ---NA--- 243 0     0      
contig09713 kelch domain containing 1 427 14 1.25E-12 62.14% 1 C:cytoplasm    
contig09714 growth differentiation factor 9 163 18 8.63E-14 73.89% 4 C:extracellular region; F:growth factor activity; P:female gamete generation; P:transforming growth factor beta receptor signaling pathway    
contig09715 ---NA--- 204 0     0      
contig09716 eukaryotic translation initiation factor subunit 4 44kda 1024 18 1.87E-77 91.61% 5 F:RNA binding; F:protein binding; P:regulation of translational initiation; F:translation initiation factor activity; F:nucleotide binding    
contig09717 ---NA--- 537 0     0      
contig09718 ---NA--- 465 0     0      
contig09719 chromosome 19 open reading frame 52 1130 20 9.32E-78 65.05% 2 P:P; C:C    
contig09720 ---NA--- 297 0     0      
contig09721 ---NA--- 307 0     0      
contig09722 ---NA--- 367 0     0      
contig09723 ribosomal protein l29 316 20 6.67E-22 98.00% 4 C:ribosome; F:structural constituent of ribosome; P:translation; F:protein binding EC:3.6.5.3  
contig09724 ---NA--- 344 0     0      
contig09725 autosomal recessive 1a 1219 20 5.09E-89 71.05% 1 C:nucleolus    
contig09726 rna binding motif protein 8a 985 20 2.02E-78 97.65% 9 C:cytoplasm; P:RNA splicing; F:mRNA binding; C:spliceosomal complex; F:protein binding; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; P:mRNA transport; P:mRNA processing; F:nucleotide binding    
contig09727 ---NA--- 235 0     0      
contig09728 ---NA--- 259 0     0      
contig09729 ---NA--- 176 0     0      
contig09730 rna-binding protein 4b 1834 20 8.06E-84 74.90% 5 F:metal ion binding; F:nucleic acid binding; F:nucleotide binding; P:RNA processing; C:intracellular part    
contig09731 ---NA--- 254 0     0      
contig09732 ---NA--- 274 0     0      
contig09733 ---NA--- 1328 0     0      
contig09734 ---NA--- 286 0     0      
contig09735 ---NA--- 235 0     0      
contig09736 unnamed protein product [Tetraodon nigroviridis] 333 4 1.78E-19 68.75% 3 F:sequence-specific DNA binding; P:P; F:DNA binding    
contig09737 tim21-like mitochondrial precursor 901 20 1.06E-78 81.30% 3 P:intracellular protein transmembrane transport; C:integral to membrane; C:mitochondrial membrane    
contig09738 ---NA--- 213 0     0      
contig09739 ---NA--- 582 0     0      
contig09740 ---NA--- 175 0     0      
contig09741 myosin light polypeptide 6 909 20 5.92E-69 96.55% 1 F:calcium ion binding    
contig09742 dynein light chain cytoplasmic 567 20 1.01E-45 99.40% 9 C:cytoplasm; P:intracellular transport; C:dynein complex; P:synaptic target recognition; F:cytoskeletal protein binding; C:myosin complex; P:microtubule-based process; F:microtubule motor activity; C:microtubule    
contig09743 ---NA--- 244 0     0      
contig09744 ---NA--- 142 0     0      
contig09745 ---NA--- 301 0     0      
contig09746 c2orf29 protein 1842 20 0 90.40% 1 P:cell proliferation    
contig09747 ---NA--- 289 0     0      
contig09748 ---NA--- 100 0     0      
contig09749 tho complex 7 homolog 397 20 6.41E-33 93.00% 2 C:nucleus; C:cytoplasm    
contig09750 transmembrane protein 188 767 20 2.38E-67 95.30% 1 C:membrane attack complex    
contig09751 ---NA--- 156 0     0      
contig09752 profilin 2 914 20 1.47E-67 88.90% 5 C:cytoplasm; P:regulation of actin filament polymerization; F:actin binding; C:actin cytoskeleton; F:phosphatidylinositol-4,5-bisphosphate binding    
contig09753 ---NA--- 252 0     0      
contig09754 nfkb activating 469 20 7.30E-21 88.75% 0      
contig09755 ---NA--- 249 0     0      
contig09756 phospholipid hydroperoxide glutathione peroxidase 804 20 1.12E-86 83.40% 15 C:cytosol; P:phospholipid metabolic process; P:hydrogen peroxide catabolic process; C:soluble fraction; C:mitochondrial inner membrane; F:glutathione peroxidase activity; P:spermatogenesis; P:glutathione metabolic process; P:chromatin organization; F:glutathione binding; P:multicellular organismal development; C:nuclear envelope; F:selenium binding; P:regulation of inflammatory response; F:phospholipid-hydroperoxide glutathione peroxidase activity EC:1.11.1.9; EC:1.11.1.12  
contig09757 ring finger protein 25 402 20 3.83E-54 74.45% 4 F:metal ion binding; P:ubiquitin cycle; P:zinc ion transport; F:protein binding    
contig09758 small nuclear ribonucleoprotein e 524 20 2.75E-38 97.00% 6 C:small nucleolar ribonucleoprotein complex; ; C:spliceosomal complex; F:protein binding; C:small nuclear ribonucleoprotein complex; P:spliceosome assembly    
contig09759 peptidylprolyl isomerase d 328 20 4.26E-21 88.00% 9 P:protein folding; P:response to oxidative stress; F:FK506 binding; F:protein binding; F:peptide binding; P:anti-apoptosis; F:peptidyl-prolyl cis-trans isomerase activity; C:mitochondrion; P:regulation of mitochondrial membrane potential EC:5.2.1.8  
contig09760 wd sterile alpha motif and u-box domain containing 1 238 2 7.29E-05 94.00% 2 F:ubiquitin-protein ligase activity; P:protein ubiquitination    
contig09761 inner centromere protein antigens 135 155kda 646 20 3.63E-62 76.30% 7 P:chromosome segregation; C:protein complex; C:centromeric heterochromatin; F:protein binding; P:cytokinesis; P:cell cycle; C:spindle    
contig09762 ---NA--- 290 0     0      
contig09763 ---NA--- 213 0     0      
contig09764 cystatin precursor 736 20 9.43E-26 77.15% 2 C:extracellular region; F:cysteine-type endopeptidase inhibitor activity    
contig09765 ---NA--- 803 0     0      
contig09766 akirin 2 1520 20 1.38E-83 85.30% 2 F:F; P:P    
contig09767 ---NA--- 233 0     0      
contig09768 egg envelope component zpax 2890 20 0 62.10% 1 C:extracellular region    
contig09769 ---NA--- 242 0     0      
contig09770 mitochondrial ribosome recycling factor 938 20 2.79E-45 86.30% 2 P:translation; C:mitochondrion EC:3.6.5.3  
contig09771 ---NA--- 486 0     0      
contig09772 ---NA--- 150 0     0      
contig09773 ---NA--- 1598 0     0      
contig09774 ---NA--- 217 0     0      
contig09775 ---NA--- 198 0     0      
contig09776 ---NA--- 285 0     0      
contig09777 novel protein 328 5 9.21E-08 83.20% 0      
contig09778 eukaryotic translation initiation factor 3 subunit 3 gamma 1315 20 2.75E-154 92.55% 4 C:eukaryotic translation initiation factor 3 complex; F:protein binding; P:regulation of translational initiation; F:translation initiation factor activity    
contig09779 n-acylsphingosine amidohydrolase (acid ceramidase) 1 1844 20 0 85.10% 5 P:response to organic substance; C:lysosome; P:lung development; P:ceramide metabolic process; F:ceramidase activity EC:3.5.1.23  
contig09780 proteasome ( macropain) alpha 5 1087 20 1.90E-131 98.35% 6 C:proteasome core complex; F:protein binding; F:threonine-type endopeptidase activity; P:ubiquitin-dependent protein catabolic process; F:endopeptidase inhibitor activity; C:nucleus EC:3.4.25.0  
contig09781 ---NA--- 573 0     0      
contig09782 pyrophosphatase 1 402 20 8.59E-30 78.70% 3 F:inorganic diphosphatase activity; P:phosphate metabolic process; F:magnesium ion binding EC:3.6.1.1  
contig09783 proliferation-associated protein 2g4 222 20 7.60E-34 94.50% 5 P:negative regulation of transcription, DNA-dependent; F:methionyl aminopeptidase activity; F:protein binding; P:proteolysis; C:nucleus EC:3.4.11.18  
contig09784 ---NA--- 144 0     0      
contig09785 radixin 426 20 2.83E-57 99.00% 14 C:filopodium; P:apical protein localization; C:extrinsic to membrane; C:stereocilium; C:ruffle; C:cytoskeleton; P:barbed-end actin filament capping; P:microvillus assembly; F:actin binding; F:structural molecule activity; C:lamellipodium; C:cytoplasm; C:apical part of cell; C:plasma membrane    
contig09786 general transcription factor polypeptide beta 34kda 858 20 1.85E-69 82.00% 7 F:DNA binding; F:RNA polymerase II transcription factor activity; F:protein binding; P:transcription initiation from RNA polymerase II promoter; F:translation initiation factor activity; C:transcription factor TFIIE complex; P:regulation of transcription, DNA-dependent    
contig09787 general transcription factor polypeptide beta 34kda 427 20 1.73E-30 88.20% 7 F:DNA binding; F:RNA polymerase II transcription factor activity; F:protein binding; P:transcription initiation from RNA polymerase II promoter; F:translation initiation factor activity; C:transcription factor TFIIE complex; P:regulation of transcription, DNA-dependent    
contig09788 ---NA--- 617 0     0      
contig09789 ---NA--- 237 0     0      
contig09790 cytochrome b-561 domain containing 2 352 20 1.24E-28 70.25% 2 F:metal ion binding; C:integral to membrane    
contig09791 unnamed protein product [Tetraodon nigroviridis] 392 1 1.60E-04 62.00% 0      
contig09792 squamous cell carcinoma antigen recognized by t cells 313 20 4.47E-31 76.50% 4 P:cell cycle arrest; C:cytosol; P:positive regulation of cytotoxic T cell differentiation; P:induction of apoptosis by intracellular signals    
contig09793 ---NA--- 353 0     0      
contig09794 mhc class i antigen 623 20 7.38E-43 66.05% 5 F:receptor activity; C:membrane; P:antigen processing and presentation; C:MHC class I protein complex; P:immune response    
contig09795 60s ribosomal protein l3 378 20 4.08E-64 97.45% 4 C:ribosome; F:structural constituent of ribosome; P:translation; F:protein binding EC:3.6.5.3  
contig09796 ---NA--- 339 0     0      
contig09797 ---NA--- 188 0     0      
contig09798 ---NA--- 196 0     0      
contig09799 glutathione s-transferase m3 1116 20 1.87E-113 88.50% 6 C:cytoplasm; F:glutathione transferase activity; P:response to estrogen stimulus; P:establishment of blood-nerve barrier; F:protein binding; P:metabolic process EC:2.5.1.18  
contig09800 ---NA--- 288 0     0      
100 Rows returned.
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