Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 9401 - 9500:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig09401 ---NA--- 223 0     0      
contig09402 ---NA--- 437 0     0      
contig09403 ---NA--- 341 0     0      
contig09404 ---NA--- 328 0     0      
contig09405 ---NA--- 680 0     0      
contig09406 ---NA--- 129 0     0      
contig09407 ---NA--- 235 0     0      
contig09408 ---NA--- 359 0     0      
contig09409 wd repeat domain 46 105 7 4.99E-09 89.71% 4 C:cytoplasm; F:aminoacyl-tRNA ligase activity; F:ATP binding; P:tRNA aminoacylation for protein translation    
contig09410 catenin (cadherin-associated protein) beta 88kda 1780 20 0 99.00% 74 C:cytoskeleton; F:signal transducer activity; C:dendritic shaft; C:fascia adherens; P:ectoderm development; P:pancreas development; P:negative regulation of osteoclast differentiation; P:camera-type eye morphogenesis; P:apoptosis; F:alpha-catenin binding; P:positive regulation of epithelial cell differentiation; P:myoblast differentiation; P:androgen receptor signaling pathway; P:cell-matrix adhesion; F:protein C-terminus binding; P:midgut development; P:cell fate determination; F:double-stranded DNA binding; P:positive regulation of osteoblast differentiation; P:heart development; P:synaptic transmission; P:dorsal/ventral axis specification; P:synaptic vesicle transport; C:desmosome; F:structural molecule activity; P:cell-cell adhesion; P:cell fate specification; C:lamellipodium; C:cytosol; C:basolateral plasma membrane; P:forebrain development; P:endodermal cell fate commitment; P:liver development; P:Wnt receptor signaling pathway through beta-catenin; P:negative regulation of chondrocyte differentiation; P:epithelial to mesenchymal transition; C:catenin complex; P:cell morphogenesis involved in differentiation; F:transcription coactivator activity; P:positive regulation of transcription from RNA polymerase II promoter; P:regulation of cell proliferation; P:gastrulation with mouth forming second; P:embryonic digit morphogenesis; F:androgen receptor binding; P:synapse organization; C:microvillus membrane; C:transcription factor complex; P:endoderm formation; P:negative regulation of transcription from RNA polymerase II promoter; P:response to estrogen stimulus; F:chromatin binding; P:patterning of blood vessels; F:transcription factor activity; P:embryonic axis specification; P:odontogenesis of dentine-containing tooth; C:synapse; P:bone resorption; P:morphogenesis of embryonic epithelium; F:cadherin binding; P:proximal/distal pattern formation; P:response to cadmium ion; C:apical part of cell; P:embryonic hindlimb morphogenesis; C:beta-catenin destruction complex; P:Schwann cell proliferation; C:Z disc; P:response to cytokine stimulus; P:embryonic arm morphogenesis; C:membrane fraction; P:cell maturation; C:cell cortex; P:response to organic cyclic substance; P:lung development; C:lateral plasma membrane    
contig09411 nucleoporin 35kda 901 20 4.89E-92 76.10% 2 C:nucleus; P:protein transport    
contig09412 dead (asp-glu-ala-as) box polypeptide 19a 2082 20 0 84.85% 8 F:RNA binding; F:ATP-dependent helicase activity; C:nuclear pore; F:ATP binding; F:protein binding; P:mRNA export from nucleus; P:intracellular protein transmembrane transport; C:cytoplasm    
contig09413 nuclear distribution gene c homolog 1454 20 1.99E-124 82.00% 8 C:cytoplasm; P:cell proliferation; F:protein binding; P:multicellular organismal development; P:mitosis; C:nucleus; P:cell division; C:microtubule    
contig09414 sry-box containing gene 11 729 20 5.55E-63 77.35% 4 C:chromatin; F:DNA binding; C:nucleus; P:regulation of transcription, DNA-dependent    
contig09415 cathepsin d 1718 20 0 79.60% 5 C:lysosome; P:proteolysis; F:pepsin A activity; F:endopeptidase inhibitor activity; F:cathepsin D activity EC:3.4.23.1; EC:3.4.23.5  
contig09416 ---NA--- 161 0     0      
contig09417 ---NA--- 166 0     0      
contig09418 wd repeat domain 77 1496 20 1.92E-146 72.55% 4 F:binding; F:receptor activity; P:P; C:C    
contig09419 translocase of outer mitochondrial membrane 40 889 20 2.42E-136 84.30% 5 P:protein targeting to mitochondrion; P:anion transport; F:voltage-gated anion channel activity; C:integral to membrane; C:mitochondrial outer membrane    
contig09420 PREDICTED: similar to KIAA1712 [Sus scrofa] 518 3 2.49E-04 61.33% 0      
contig09421 ring finger protein 219 1271 18 5.12E-17 45.06% 3 F:metal ion binding; F:zinc ion binding; F:protein binding    
contig09422 chromosome 1 open reading frame 149 1022 20 8.42E-86 87.35% 2 P:P; C:C    
contig09423 ubiquitin-activating enzyme e1 1689 20 0 90.00% 6 F:ligase activity; F:ubiquitin activating enzyme activity; F:protein binding; P:ubiquitin-dependent protein catabolic process; P:ubiquitin cycle; F:ATP binding    
contig09424 ---NA--- 533 0     0      
contig09425 protein disulfide isomerase family member 4 1475 20 0 77.65% 6 C:endoplasmic reticulum lumen; P:cell redox homeostasis; F:protein binding; F:calcium ion binding; F:isomerase activity; P:protein secretion    
contig09426 dead (asp-glu-ala-asp) box polypeptide 39 1434 20 0 98.05% 7 F:ATP-dependent helicase activity; P:mRNA export from nucleus; F:nucleic acid binding; F:protein binding; F:ATP binding; C:nucleus; P:nuclear mRNA splicing, via spliceosome    
contig09427 reticulon 4 315 20 3.30E-37 88.90% 9 P:angiogenesis; C:integral to endoplasmic reticulum membrane; P:negative regulation of axon extension; C:neuronal cell body; P:regulation of cell migration; C:cell projection; P:negative regulation of anti-apoptosis; F:protein binding; C:nuclear envelope    
contig09428 ---NA--- 106 0     0      
contig09429 ---NA--- 161 0     0      
contig09430 vesicle amine transport protein 1 1060 20 1.28E-92 84.45% 7 F:heme binding; F:ATPase activity; P:metabolic process; F:peroxidase activity; F:cofactor binding; F:zinc ion binding; P:response to oxidative stress EC:1.11.1.7  
contig09431 ---NA--- 283 0     0      
contig09432 ---NA--- 597 0     0      
contig09433 uncharacterized protein c12orf29 1332 20 1.64E-154 76.15% 2 P:P; C:C    
contig09434 alcohol dehydrogenase class-3 1123 20 4.59E-112 93.95% 6 P:metabolic process; C:cytoplasm; F:alcohol dehydrogenase (NAD) activity; P:zinc ion transport; F:S-(hydroxymethyl)glutathione dehydrogenase activity; F:zinc ion binding EC:1.1.1.1; EC:1.1.1.284  
contig09435 zona pellucida c 562 20 1.56E-19 52.25% 8 P:binding of sperm to zona pellucida; P:single fertilization; C:integral to membrane; C:proteinaceous extracellular matrix; F:acrosin binding; F:protein binding; C:extracellular region; C:plasma membrane    
contig09436 zona pellucida glycoprotein 3 (sperm receptor) 366 20 4.65E-12 55.40% 1 F:acrosin binding    
contig09437 ---NA--- 222 0     0      
contig09438 pdgfa associated protein 1 1913 20 2.13E-39 78.45% 3 F:kinase activity; F:platelet-derived growth factor binding; P:platelet-derived growth factor receptor signaling pathway    
contig09439 cdc28 protein kinase regulatory subunit 1b 392 20 2.90E-38 93.25% 6 F:kinase activity; P:regulation of cyclin-dependent protein kinase activity; F:cyclin-dependent protein kinase regulator activity; F:protein binding; P:cell division; P:cell proliferation    
contig09440 ---NA--- 263 0     0      
contig09441 transcription elongation factor a 1 765 20 4.21E-64 84.00% 10 F:translation elongation factor activity; P:RNA elongation; F:zinc ion binding; P:positive regulation of transcription from RNA polymerase II promoter; F:DNA binding; P:erythrocyte differentiation; F:protein binding; F:transcription elongation regulator activity; C:nucleoplasm; F:RNA polymerase II transcription factor activity    
contig09442 sft2 domain containing 2 693 20 1.70E-63 77.10% 2 P:transport; C:membrane    
contig09443 ---NA--- 441 0     0      
contig09444 succinate dehydrogenase subunit flavoprotein 1267 20 7.36E-133 89.85% 6 C:mitochondrial inner membrane; P:electron transport; P:transport; P:tricarboxylic acid cycle; F:FAD binding; F:succinate dehydrogenase (ubiquinone) activity EC:1.3.5.1  
contig09445 coiled-coil domain containing 22 376 20 8.35E-25 90.05% 2 P:P; C:C    
contig09446 utp11- u3 small nucleolar ribonucleoprotein 376 20 1.74E-14 87.70% 8 C:small-subunit processome; P:induction of apoptosis; P:rRNA processing; C:extracellular space; P:nerve growth factor receptor signaling pathway; P:nervous system development; F:protein binding; C:cytoplasm    
contig09447 ---NA--- 847 0     0      
contig09448 ---NA--- 195 0     0      
contig09449 thyroid hormone receptor interactor 3 614 20 9.51E-67 67.50% 2 F:thyroid hormone receptor binding; P:regulation of transcription, DNA-dependent    
contig09450 sporulation meiosis- spo11 homolog ( cerevisiae) 1246 20 3.47E-154 83.05% 10 P:reciprocal meiotic recombination; P:female gamete generation; P:spermatogenesis; P:ovarian follicle development; F:ATP binding; F:DNA topoisomerase (ATP-hydrolyzing) activity; C:chromosome; P:DNA topological change; F:hydrolase activity; C:nucleus EC:5.99.1.3  
contig09451 ---NA--- 213 0     0      
contig09452 PREDICTED: similar to ReO_6 [Danio rerio] 636 1 7.67E-09 65.00% 0      
contig09453 ---NA--- 246 0     0      
contig09454 histone cluster h2bb 173 20 5.18E-11 100.00% 4 C:nucleosome; F:DNA binding; P:nucleosome assembly; C:nucleus    
contig09455 ---NA--- 228 0     0      
contig09456 adenylate kinase 684 2 2.72E-05 60.00% 0      
contig09457 transducer of 1 759 20 1.35E-22 89.35% 11 P:SMAD protein nuclear translocation; P:negative regulation of BMP signaling pathway; P:Wnt receptor signaling pathway through beta-catenin; F:SH3/SH2 adaptor activity; P:dorsal/ventral pattern formation; P:negative regulation of osteoblast differentiation; F:SMAD binding; P:negative regulation of cell proliferation; F:transcription corepressor activity; C:cytoplasm; C:nucleus    
contig09458 transducer of 1 797 20 1.95E-107 91.70% 11 P:SMAD protein nuclear translocation; P:negative regulation of BMP signaling pathway; P:Wnt receptor signaling pathway through beta-catenin; F:SH3/SH2 adaptor activity; P:dorsal/ventral pattern formation; P:negative regulation of osteoblast differentiation; F:SMAD binding; P:negative regulation of cell proliferation; F:transcription corepressor activity; C:cytoplasm; C:nucleus    
contig09459 unnamed protein product [Tetraodon nigroviridis] 459 1 1.34E-07 62.00% 0      
contig09460 fk506 binding protein 25kda 986 20 1.81E-114 87.95% 5 P:protein folding; F:receptor activity; F:peptidyl-prolyl cis-trans isomerase activity; C:nucleus; F:FK506 binding EC:5.2.1.8  
contig09461 myristoylated alanine-rich protein kinase c substrate 1691 20 1.77E-34 60.10% 2 C:cytoskeleton; F:actin binding    
contig09462 tumor suppressor candidate 2 1203 20 5.58E-42 86.10% 4 P:cell-cell signaling; P:negative regulation of cell cycle; F:protein binding; P:cell proliferation    
contig09463 ---NA--- 138 0     0      
contig09464 ribosomal protein s23 527 20 8.02E-14 99.40% 5 F:translation regulator activity; F:structural constituent of ribosome; F:RNA binding; C:cytosolic small ribosomal subunit; P:translation EC:3.6.5.3  
contig09465 cytochrome c subunit viia 2 551 20 5.16E-33 80.85% 5 F:electron carrier activity; P:electron transport; C:integral to membrane; F:cytochrome-c oxidase activity; C:mitochondrial respiratory chain EC:1.9.3.1  
contig09466 taf6 rna polymerase tata box binding protein -associated factor 1222 20 9.20E-106 81.35% 9 F:general RNA polymerase II transcription factor activity; F:DNA binding; F:protein binding; C:transcription factor TFIID complex; F:transcription initiation factor activity; P:transcription initiation; P:regulation of transcription factor activity; C:transcription factor TFIIE complex; P:regulation of transcription, DNA-dependent    
contig09467 ---NA--- 111 0     0      
contig09468 deoxythymidylate kinase (thymidylate kinase) 983 20 4.66E-79 76.70% 6 F:thymidylate kinase activity; P:cell proliferation; P:dTDP biosynthetic process; P:cell cycle; P:dTTP biosynthetic process; F:nucleotide binding EC:2.7.4.9  
contig09469 ---NA--- 100 0     0      
contig09470 ---NA--- 156 0     0      
contig09471 ---NA--- 325 0     0      
contig09472 propionyl-coenzyme a alpha polypeptide 1441 20 0 87.20% 7 F:propionyl-CoA carboxylase activity; P:cellular amino acid catabolic process; P:fatty acid catabolic process; F:biotin binding; F:ATP binding; P:biotin biosynthetic process; C:mitochondrial matrix EC:6.4.1.3  
contig09473 rna binding motif protein 13 1864 20 2.48E-117 85.05% 1 C:nucleus    
contig09474 ---NA--- 170 0     0      
contig09475 proteasome ( macropain) 26s non- 1 697 20 3.39E-27 94.25% 3 C:proteasome regulatory particle; F:protein binding; C:cytosol    
contig09476 ---NA--- 306 0     0      
contig09477 ran binding protein 3 330 20 8.49E-46 76.75% 1 P:intracellular transport    
contig09478 ---NA--- 165 0     0      
contig09479 rab interacting factor 641 20 1.10E-63 84.10% 5 P:protein transport; F:guanyl-nucleotide exchange factor activity; F:zinc ion binding; P:cellular membrane fusion; P:small GTPase mediated signal transduction    
contig09480 ---NA--- 249 0     0      
contig09481 ---NA--- 358 0     0      
contig09482 ---NA--- 718 0     0      
contig09483 mediator complex subunit 22 178 20 6.71E-19 95.80% 3 ; P:transcription antitermination; P:regulation of transcription, DNA-dependent    
contig09484 ---NA--- 117 0     0      
contig09485 ---NA--- 493 0     0      
contig09486 ---NA--- 487 0     0      
contig09487 ---NA--- 757 0     0      
contig09488 ---NA--- 209 0     0      
contig09489 glutamic acid and leucine rich protein 1 178 9 8.20E-17 66.56% 3 C:cytoplasm; P:transcription; C:nucleus    
contig09490 glutamic acid and leucine rich protein 1 151 1 1.60E-07 75.00% 0      
contig09491 low molecular weight phosphotyrosine protein phosphatase 108 20 5.31E-11 91.00% 6 C:cytoplasm; F:non-membrane spanning protein tyrosine phosphatase activity; F:identical protein binding; C:soluble fraction; F:acid phosphatase activity; P:protein amino acid dephosphorylation EC:3.1.3.2  
contig09492 ---NA--- 628 0     0      
contig09493 hexamethylene bis-acetamide inducible 1 501 20 1.84E-54 79.00% 9 P:negative regulation of cyclin-dependent protein kinase activity; F:cyclin-dependent protein kinase inhibitor activity; P:heart development; P:negative regulation of transcription from RNA polymerase II promoter; F:protein binding; F:specific transcriptional repressor activity; C:cytoplasm; C:nucleus; F:snRNA binding    
contig09494 nicotinamide riboside kinase 2 1050 20 4.70E-39 87.75% 5 F:kinase activity; P:integrin-mediated signaling pathway; P:pyridine nucleotide biosynthetic process; F:protein binding; F:ATP binding    
contig09495 cell death-inducing dna fragmentation alpha subunit-like effector a 785 20 2.20E-55 68.85% 10 P:temperature homeostasis; P:negative regulation of transforming growth factor beta receptor signaling pathway; P:DNA fragmentation involved in apoptosis; P:lipid storage; P:negative regulation of lipid catabolic process; C:mitochondrial envelope; F:protein homodimerization activity; P:negative regulation of apoptosis; C:nucleus; P:cytokine production    
contig09496 polymerase ii (dna directed) polypeptide d 973 20 2.77E-67 94.15% 4 F:DNA-directed RNA polymerase activity; C:DNA-directed RNA polymerase II, core complex; P:transcription from RNA polymerase II promoter; F:nucleotide binding EC:2.7.7.6  
contig09497 ---NA--- 121 0     0      
contig09498 ---NA--- 457 0     0      
contig09499 eukaryotic translation initiation factor y-linked 802 20 2.20E-50 98.10% 8 C:eukaryotic translation initiation factor 4F complex; P:translational initiation; F:RNA binding; F:protein binding; P:transport; F:translation initiation factor activity; C:membrane; F:transporter activity    
contig09500 ww domain containing adaptor with coiled-coil 469 20 4.57E-23 89.45% 2 C:spliceosomal complex; F:protein binding    
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