Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 9101 - 9200:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig09101 family with sequence similarity member b 145 20 1.83E-19 93.20% 1 F:binding    
contig09102 nadh dehydrogenase iron-sulfur protein mitochondrial precursor 450 20 1.49E-35 76.75% 10 P:response to oxidative stress; F:NADH dehydrogenase (ubiquinone) activity; C:mitochondrial respiratory chain complex I; P:ubiquinone biosynthetic process; P:cellular iron ion homeostasis; F:4 iron, 4 sulfur cluster binding; P:mitochondrial electron transport, NADH to ubiquinone; P:iron ion transport; P:mitochondrial respiratory chain complex I assembly; F:iron ion binding EC:1.6.5.3  
contig09103 caspase apoptosis-related cysteine peptidase 927 20 1.21E-39 62.80% 9 C:intracellular organelle; P:positive regulation of apoptosis; F:cysteine-type peptidase activity; F:signal transducer activity; F:identical protein binding; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; P:proteolysis; C:cytoplasm;    
contig09104 ---NA--- 686 0     0      
contig09105 ---NA--- 350 0     0      
contig09106 zgc:171967 protein 719 20 7.79E-38 87.75% 8 F:glucosidase activity; P:carbohydrate metabolic process; F:glucan 1,3-alpha-glucosidase activity; C:Golgi apparatus; F:protein binding; C:melanosome; C:alpha-glucosidase II complex; P:N-glycan processing EC:3.2.1.84  
contig09107 suppression of tumorigenicity isoform a 770 20 1.31E-81 98.70% 1 P:P    
contig09108 f-box and leucine-rich repeat protein 18 845 20 2.11E-70 69.35% 3 F:F; P:P; C:C    
contig09109 adaptor-related protein complex mu 1 subunit 1517 20 0 98.75% 8 P:protein complex assembly; F:protein binding; F:protein transporter activity; P:vesicle-mediated transport; P:intracellular protein transport; C:cytoplasmic vesicle; C:clathrin adaptor complex; C:trans-Golgi network    
contig09110 fk506 binding 388 12 5.31E-32 48.92% 1 F:binding    
contig09111 mitochondrial ribosomal protein l53 422 20 2.51E-37 71.65% 3 C:cytoplasmic part; C:ribonucleoprotein complex; C:intracellular organelle    
contig09112 chromatin-specific transcription elongation factor 140 kda subunit (m24 family) 541 1 1.05E-06 75.00% 0      
contig09113 ---NA--- 185 0     0      
contig09114 ---NA--- 412 0     0      
contig09115 ---NA--- 396 0     0      
contig09116 pus7 protein 455 20 7.73E-23 90.00% 4 F:RNA binding; F:pseudouridylate synthase activity; P:tRNA pseudouridine synthesis; EC:4.2.1.70  
contig09117 ---NA--- 318 0     0      
contig09118 ---NA--- 204 0     0      
contig09119 enhancer of split groucho 312 10 5.30E-16 74.00% 1 C:nucleus    
contig09120 ---NA--- 144 0     0      
contig09121 signal sequence alpha 1081 20 1.32E-92 94.50% 6 C:endoplasmic reticulum membrane; F:signal sequence binding; P:positive regulation of cell proliferation; F:calcium ion binding; P:cotranslational protein targeting to membrane; C:integral to membrane    
contig09122 ---NA--- 265 0     0      
contig09123 tia1 protein 469 20 6.54E-54 96.50% 8 P:negative regulation of cytokine biosynthetic process; P:negative regulation of translation; P:induction of apoptosis; F:poly(A) RNA binding; F:AU-rich element binding; F:nucleotide binding; C:cytoplasm; C:nucleus    
contig09124 protein disulfide isomerase family member 6 1470 20 1.45E-114 86.10% 9 P:protein folding; C:endoplasmic reticulum lumen; C:ER-Golgi intermediate compartment; P:cell redox homeostasis; F:protein binding; C:melanosome; C:signal recognition particle, endoplasmic reticulum targeting; F:protein disulfide isomerase activity; P:negative regulation of signal transduction EC:3.6.5.4; EC:5.3.4.1  
contig09125 dead (asp-glu-ala-asp) box polypeptide 54 503 20 5.40E-30 80.25% 9 F:estrogen receptor binding; F:RNA binding; P:RNA processing; P:estrogen receptor signaling pathway; F:ATP-dependent RNA helicase activity; C:nucleolus; P:regulation of transcription, DNA-dependent; F:ATP binding; F:transcription corepressor activity    
contig09126 ---NA--- 283 0     0      
contig09127 ---NA--- 385 0     0      
contig09128 ---NA--- 440 0     0      
contig09129 ---NA--- 519 0     0      
contig09130 cyclin k 928 20 4.98E-95 91.45% 6 F:protein binding; P:mitosis; P:regulation of cyclin-dependent protein kinase activity; P:transcription from RNA polymerase II promoter; P:regulation of transcription, DNA-dependent; P:cell division    
contig09131 nuclear respiratory factor 1 796 20 1.38E-44 92.25% 10 P:mitochondrion organization; P:regulation of transcription from RNA polymerase II promoter; P:response to cold; C:transcription factor complex; P:generation of precursor metabolites and energy; P:carbohydrate metabolic process; F:transcription activator activity; F:transcription factor activity; P:transcription antitermination; P:multicellular organismal development    
contig09132 solute carrier family sodium bicarbonate member 7 563 20 4.31E-86 91.20% 7 F:inorganic anion exchanger activity; P:anion transport; F:sodium ion binding; C:integral to membrane; F:symporter activity; P:sodium ion transport; C:cell projection    
contig09133 cd2 (cytoplasmic tail) binding protein 2 239 20 5.95E-15 76.25% 2 F:protein binding; C:cytoplasm    
contig09134 ---NA--- 565 0     0      
contig09135 interferon regulatory factor 6 647 20 5.84E-36 70.60% 4 P:transcription antitermination; F:transcription factor activity; C:nucleus; P:regulation of transcription, DNA-dependent    
contig09136 ---NA--- 240 0     0      
contig09137 ---NA--- 343 0     0      
contig09138 coatomer protein subunit beta 2 (beta prime) 431 20 2.25E-22 56.20% 5 P:vesicle-mediated transport; C:COPI vesicle coat; F:protein binding; P:intracellular transport; P:notochord development    
contig09139 ---NA--- 169 0     0      
contig09140 fanconi complementation group f 842 17 5.60E-23 49.76% 6 F:F; P:DNA repair; P:P; F:protein binding; C:C; C:nucleus    
contig09141 transcription termination factor 1 399 20 1.37E-43 55.50% 4 F:binding; P:regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; P:cellular component organization; P:transcription, DNA-dependent    
contig09142 ---NA--- 217 0     0      
contig09143 ---NA--- 276 0     0      
contig09144 adp-ribosylation factor-like 4a 1308 20 1.87E-78 90.20% 4 F:GTPase activity; C:nucleus; F:GTP binding; P:small GTPase mediated signal transduction EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig09145 vacuolar protein sorting 36 136 20 7.97E-12 91.25% 8 F:lipid binding; C:late endosome; C:lysosome; P:endosome transport; F:ubiquitin binding; C:nucleus; P:regulation of transcription, DNA-dependent; P:protein transport    
contig09146 aminopeptidase-like 1 2370 20 0 89.85% 5 C:intracellular; P:proteolysis; F:manganese ion binding; F:zinc ion binding; F:aminopeptidase activity EC:3.4.11.0  
contig09147 dolichyl-phosphate mannosyltransferase polypeptide catalytic subunit 722 20 2.77E-67 97.70% 15 P:GPI anchor biosynthetic process; P:GDP-mannose metabolic process; F:alcohol binding; F:mannose binding; C:mannosyltransferase complex; P:protein amino acid O-linked mannosylation; F:DNA binding; F:dolichyl-phosphate beta-D-mannosyltransferase activity; C:microsome; F:dolichyl-phosphate-mannose-protein mannosyltransferase activity; F:protein binding; P:protein amino acid C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan; C:endoplasmic reticulum membrane; C:nucleus; P:dolichol metabolic process EC:2.4.1.83; EC:2.4.1.109  
contig09148 ---NA--- 323 0     0      
contig09149 novel protein 311 7 1.45E-35 69.14% 1 F:nucleic acid binding    
contig09150 deoxyribonuclease i-like 3 416 20 1.10E-37 69.30% 3 F:deoxyribonuclease activity; P:DNA catabolic process; C:C    
contig09151 metallophosphoesterase domain containing 2 385 20 5.48E-53 95.75% 2 F:hydrolase activity; P:nervous system development    
contig09152 poly binding protein 2 1819 20 3.42E-172 89.05% 4 F:RNA binding; C:ribonucleoprotein complex; P:RNA processing; C:nucleus    
contig09153 member ras oncogene family 738 20 1.68E-22 98.00% 10 P:cellular component movement; P:small GTPase mediated signal transduction; P:regulation of transcription, DNA-dependent; C:cytoplasmic membrane-bounded vesicle; F:ATP binding; F:GTPase activity; F:transcription factor binding; P:protein transport; F:GTP binding; C:plasma membrane EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig09154 solute carrier family 30 (zinc transporter) member 5 205 20 3.85E-14 92.35% 5 C:Golgi apparatus; P:zinc ion transport; C:membrane attack complex; F:zinc ion binding; F:zinc ion transmembrane transporter activity    
contig09155 ---NA--- 360 0     0      
contig09156 ---NA--- 331 0     0      
contig09157 ---NA--- 724 0     0      
contig09158 ---NA--- 418 0     0      
contig09159 enolase-phosphatase 1 1233 20 4.21E-77 84.55% 5 F:phosphoglycolate phosphatase activity; P:methionine biosynthetic process; P:L-methionine salvage from methylthioadenosine; F:magnesium ion binding; F:acireductone synthase activity EC:3.1.3.18; EC:3.1.3.77  
contig09160 ---NA--- 279 0     0      
contig09161 nmd3 homolog 1144 20 1.51E-126 89.45% 4 C:cytoplasm; C:nucleus; F:ribosomal large subunit binding; P:ribosomal large subunit export from nucleus    
contig09162 ---NA--- 172 0     0      
contig09163 ---NA--- 315 0     0      
contig09164 ---NA--- 170 0     0      
contig09165 ---NA--- 223 0     0      
contig09166 dna primase polypeptide 2 1379 20 0 84.05% 7 F:DNA binding; F:iron ion binding; P:transcription; F:DNA primase activity; F:4 iron, 4 sulfur cluster binding; C:alpha DNA polymerase:primase complex; P:DNA replication, synthesis of RNA primer    
contig09167 ---NA--- 249 0     0      
contig09168 ---NA--- 154 0     0      
contig09169 heat shock 70kda protein 14 484 20 9.01E-11 78.80% 1 F:ATP binding    
contig09170 wolf-hirschhorn syndrome candidate 2 898 20 3.76E-93 80.45% 2 P:multicellular organismal development; P:transcription    
contig09171 ---NA--- 392 0     0      
contig09172 ---NA--- 159 0     0      
contig09173 ---NA--- 114 0     0      
contig09174 ---NA--- 304 0     0      
contig09175 zgc:101616 protein 586 2 7.83E-12 66.00% 2 P:mitosis; C:C    
contig09176 spindle and kinetochore-associated protein 1 458 20 8.22E-25 57.20% 5 F:F; P:cell cycle; C:spindle; P:cell division; P:mitosis    
contig09177 ataxin 7-like 2 417 20 3.29E-35 55.20% 3 F:F; P:P; C:C    
contig09178 ---NA--- 167 0     0      
contig09179 coiled-coil domain containing 49 759 20 2.22E-25 77.40% 0      
contig09180 ---NA--- 548 0     0      
contig09181 nucleoporin like 2 1085 20 1.31E-07 83.05% 6 C:nuclear pore; P:intracellular protein transmembrane transport; F:nucleic acid binding; P:zinc ion transport; P:mRNA transport; F:zinc ion binding    
contig09182 wd repeat-containing protein 82 1017 20 1.41E-141 96.15% 1 C:nucleus    
contig09183 asparagine-linked glycosylation 14 homolog 377 20 1.97E-50 88.90% 6 C:endoplasmic reticulum membrane; C:extracellular space; F:binding; C:mitochondrial inner membrane; P:transport; C:integral to membrane    
contig09184 ---NA--- 658 0     0      
contig09185 mediator complex subunit 20 634 20 3.82E-69 81.90% 6 F:DNA-directed RNA polymerase activity; P:regulation of transcription from RNA polymerase II promoter; F:general RNA polymerase II transcription factor activity; C:mediator complex; F:protein binding; P:transcription antitermination EC:2.7.7.6  
contig09186 apg16l beta 816 20 1.18E-131 85.95% 4 P:protein transport; C:pre-autophagosomal structure membrane; P:autophagy; F:protein binding    
contig09187 ---NA--- 724 0     0      
contig09188 rna polymerase ii associated homolog ( cerevisiae) 829 20 1.26E-128 97.85% 2 F:F; P:P    
contig09189 ---NA--- 697 0     0      
contig09190 trna splicing endonuclease 34 homolog ( cerevisiae) 1042 20 7.12E-56 67.50% 3 F:protein binding; F:nuclease activity; P:RNA processing    
contig09191 ---NA--- 373 0     0      
contig09192 ---NA--- 134 0     0      
contig09193 nf-kappa-b inhibitor alpha 743 20 1.46E-18 74.25% 0      
contig09194 ly6 plaur domain containing 6 1012 20 9.28E-45 80.70% 1 C:extracellular region    
contig09195 chromosome 17 open reading frame 37 1238 20 8.35E-33 73.50% 1 F:selenium binding    
contig09196 elongation factor 2 830 20 4.53E-150 92.25% 0      
contig09197 udp-n-acetyl-alpha-d-galactosamine:polypeptide n-acetylgalactosaminyltransferase-like 4 566 20 1.30E-21 64.45% 3 F:binding; F:transferase activity, transferring glycosyl groups; C:membrane    
contig09198 riken cdna 4921524j17 1027 19 1.04E-51 81.68% 2 F:F; P:P    
contig09199 retinoblastoma binding protein 5 453 8 1.41E-08 88.50% 4 F:F; C:histone methyltransferase complex; P:P; C:nucleus    
contig09200 proteasome subunit alpha type-4 453 20 3.93E-51 99.40% 6 F:identical protein binding; C:proteasome core complex; F:threonine-type endopeptidase activity; P:ubiquitin-dependent protein catabolic process; F:endopeptidase inhibitor activity; C:nucleus EC:3.4.25.0  
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