Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 9001 - 9100:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig09001 proteasome ( macropain) alpha 6 1769 20 1.31E-128 96.45% 7 C:proteasome core complex; F:RNA binding; F:protein binding; F:threonine-type endopeptidase activity; P:ubiquitin-dependent protein catabolic process; F:endopeptidase inhibitor activity; C:nucleus EC:3.4.25.0  
contig09002 ---NA--- 263 0     0      
contig09003 ---NA--- 292 0     0      
contig09004 catenin (cadherin-associated protein) delta 1 241 20 4.67E-36 93.55% 1 F:binding    
contig09005 cytochrome c oxidase subunit viia-related mitochondrial precursor 578 20 1.09E-50 84.20% 4 F:electron carrier activity; P:electron transport; F:cytochrome-c oxidase activity; C:mitochondrial respiratory chain EC:1.9.3.1  
contig09006 iq motif containing gtpase activating protein 1 246 20 1.36E-11 93.35% 11 C:cytoplasm; C:cell leading edge; C:protein complex; P:regulation of small GTPase mediated signal transduction; C:actin filament; C:neuron projection; C:plasma membrane; F:protein complex binding; F:GTPase inhibitor activity; F:Ras GTPase activator activity; F:calmodulin binding    
contig09007 protein tyrosine non-receptor type 9 245 20 4.82E-25 91.15% 8 C:cytoplasm; F:non-membrane spanning protein tyrosine phosphatase activity; F:receptor activity; F:protein binding; P:transport; P:protein amino acid dephosphorylation; F:prenylated protein tyrosine phosphatase activity; F:transporter activity    
contig09008 ---NA--- 161 0     0      
contig09009 la ribonucleoprotein domain member 1 250 20 4.04E-40 91.60% 2 F:heme binding; C:cytoplasm    
contig09010 ---NA--- 251 0     0      
contig09011 xpa binding protein 1 512 20 1.50E-43 95.25% 6 F:nucleoside-triphosphatase activity; C:cytoplasm; F:ATP binding; F:protein binding; F:GTP binding; P:small GTPase mediated signal transduction EC:3.6.1.15  
contig09012 snw domain containing 1 783 20 1.60E-114 97.25% 6 F:transcription coactivator activity; P:RNA splicing; C:spliceosomal complex; P:positive regulation of transcription from RNA polymerase II promoter; P:mRNA processing; F:vitamin D receptor binding    
contig09013 rna guanylyltransferase and 5 -phosphatase 952 20 5.50E-105 87.95% 7 F:protein tyrosine phosphatase activity; F:protein tyrosine/serine/threonine phosphatase activity; P:mRNA capping; F:mRNA guanylyltransferase activity; P:protein amino acid dephosphorylation; F:polynucleotide 5'-phosphatase activity; C:nucleus EC:3.1.3.48; EC:2.7.7.50; EC:3.1.3.33  
contig09014 ---NA--- 478 0     0      
contig09015 xrcc6 binding protein 1 483 20 1.94E-21 84.10% 5 P:double-strand break repair via nonhomologous end joining; F:DNA-dependent protein kinase activity; P:proteolysis; F:metallopeptidase activity; C:DNA-dependent protein kinase-DNA ligase 4 complex    
contig09016 escrt-ii complex homolog ( cerevisiae) 1335 20 8.41E-58 97.00% 6 C:cytoplasm; P:regulation of transcription from RNA polymerase II promoter; F:RNA polymerase II transcription factor activity; C:transcription factor complex; F:transcription factor binding; P:protein transport    
contig09017 survival of motor neuron protein interacting protein 1 1072 20 5.28E-94 79.25% 6 P:axon extension involved in development; P:spliceosome assembly; F:protein binding; C:spliceosomal complex; ; C:cytoplasm    
contig09018 ---NA--- 220 0     0      
contig09019 ---NA--- 104 0     0      
contig09020 cbp p300-interacting transactivator 2 986 20 2.33E-45 79.60% 3 C:nucleus; F:transcription regulator activity; P:regulation of transcription    
contig09021 nsfl1 cofactor 440 20 1.29E-54 82.65% 0      
contig09022 mcm4 minichromosome maintenance deficient 4 ( cerevisiae) 1431 20 6.63E-157 95.95% 13 F:DNA helicase activity; P:regulation of DNA replication initiation; F:zinc ion binding; P:cell cycle; P:regulation of transcription, DNA-dependent; P:DNA unwinding involved in replication; C:MCM complex; F:ATP binding; C:chromatin; F:protein binding; F:single-stranded DNA binding; F:DNA-dependent ATPase activity; F:chromatin binding    
contig09023 signal recognition particle 72 818 20 1.01E-98 90.40% 3 P:SRP-dependent cotranslational protein targeting to membrane; C:signal recognition particle, endoplasmic reticulum targeting; F:7S RNA binding EC:3.6.5.4  
contig09024 kinesin family member c1 1312 20 1.08E-150 82.10% 10 F:microtubule motor activity; C:microtubule associated complex; C:intracellular membrane-bounded organelle; P:phosphoenolpyruvate-dependent sugar phosphotransferase system; P:mitotic sister chromatid segregation; C:microtubule; F:ATP binding; P:microtubule-based movement; C:cytoplasmic part; F:sugar:hydrogen symporter activity    
contig09025 chromatin assembly factor subunit a 714 20 3.25E-28 48.00% 3 P:cellular process; P:primary metabolic process; P:macromolecule metabolic process    
contig09026 unnamed protein product [Tetraodon nigroviridis] 170 1 1.24E-04 78.00% 0      
contig09027 member ras oncogene family 1449 20 1.43E-98 94.05% 14 F:protein transporter activity; P:two-component signal transduction system (phosphorelay); P:small GTPase mediated signal transduction; P:regulation of transcription, DNA-dependent; F:DNA binding; F:ATP binding; P:ER to Golgi vesicle-mediated transport; F:GTPase activity; F:transcription factor binding; P:intracellular protein transport; C:Golgi apparatus; C:endoplasmic reticulum; F:GTP binding; C:plasma membrane EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig09028 pyrroline-5-carboxylate reductase 1 733 20 1.80E-61 92.00% 5 F:binding; F:pyrroline-5-carboxylate reductase activity; P:electron transport; P:proline biosynthetic process; C:mitochondrion EC:1.5.1.2  
contig09029 ---NA--- 533 0     0      
contig09030 nf-kappa-b inhibitor alpha 640 20 3.76E-96 67.95% 0      
contig09031 origin recognition subunit 5-like 1215 20 1.50E-143 87.90% 5 F:identical protein binding; P:DNA replication initiation; F:DNA replication origin binding; F:ATP binding; C:nucleus    
contig09032 ---NA--- 193 0     0      
contig09033 cytochrome c oxidase subunit 4 isoform mitochondrial precursor 885 20 4.30E-85 86.80% 5 C:mitochondrial inner membrane; F:protein binding; P:electron transport; P:response to hypoxia; F:cytochrome-c oxidase activity EC:1.9.3.1  
contig09034 pentatricopeptide repeat domain 3 1192 20 7.05E-106 66.10% 1 F:protein binding    
contig09035 nfkb repressing factor 967 20 8.04E-43 52.30% 1 P:transcription    
contig09036 sterile alpha motif domain containing 1 783 20 3.64E-42 84.05% 3 C:extracellular region; F:structural constituent of cell wall; C:cytoplasm    
contig09037 lim homeobox 8 1115 20 1.58E-96 82.40% 13 P:response to oxidative stress; F:zinc ion binding; P:zinc ion transport; P:female gonad development; P:regulation of transcription, DNA-dependent; P:odontogenesis of dentine-containing tooth; C:transcription factor complex; P:forebrain neuron differentiation; F:peroxidase activity; F:sequence-specific DNA binding; F:transcription factor activity; F:heme binding; P:learning or memory EC:1.11.1.7  
contig09038 ---NA--- 439 0     0      
contig09039 probable protein brick1 286 20 1.14E-21 95.65% 3 C:cytoskeleton; F:protein binding; C:cytoplasm    
contig09040 ubiquinol-cytochrome c reductase complex cbp3 homolog 564 20 4.85E-85 85.60% 2 C:cytoplasmic membrane-bounded vesicle; F:protein binding    
contig09041 ---NA--- 175 0     0      
contig09042 ---NA--- 271 0     0      
contig09043 cancer susceptibility candidate 4 498 20 4.01E-54 83.35% 1 C:integral to membrane    
contig09044 mitochondrial ribosomal protein l10 541 20 4.84E-28 77.25% 4 C:mitochondrial large ribosomal subunit; P:ribosome biogenesis; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig09045 polymerase ii (dna directed) polypeptide h 941 20 9.24E-81 95.75% 6 P:transcription; F:nucleic acid binding; F:DNA-directed RNA polymerase activity; C:nucleus; F:zinc ion binding; F:protein binding EC:2.7.7.6  
contig09046 ---NA--- 521 0     0      
contig09047 ---NA--- 547 0     0      
contig09048 ---NA--- 452 0     0      
contig09049 ---NA--- 675 0     0      
contig09050 ---NA--- 242 0     0      
contig09051 dimethylarginine dimethylaminohydrolase 2 700 20 6.66E-31 74.75% 10 P:response to stimulus; F:zinc ion binding; P:arginine catabolic process; P:nitric oxide mediated signal transduction; P:anti-apoptosis; F:amino acid binding; F:dimethylargininase activity; P:protein amino acid nitrosylation; C:cytoplasm; P:nitric oxide biosynthetic process EC:3.5.3.18  
contig09052 dead h (asp-glu-ala-asp his) box polypeptide 31 624 20 9.66E-78 74.90% 3 F:nucleic acid binding; F:ATP binding; F:ATP-dependent helicase activity    
contig09053 ---NA--- 485 0     0      
contig09054 ccctc-binding factor (zinc finger protein) 748 20 5.24E-56 57.40% 4 F:protein binding; F:transcription factor activity; P:positive regulation of transcription, DNA-dependent; C:nucleus    
contig09055 glutathione s-transferase theta-1 634 20 8.68E-67 81.05% 2 P:glutathione metabolic process; F:glutathione transferase activity EC:2.5.1.18  
contig09056 histone deacetylase 10 555 20 3.48E-16 55.90% 7 F:histone deacetylase activity; P:regulation of transcription, DNA-dependent; P:histone deacetylation; C:histone deacetylase complex; F:specific transcriptional repressor activity; C:cytoplasm; F:histone deacetylase binding    
contig09057 trafficking protein particle complex 4 379 20 1.32E-54 95.65% 11 P:dendrite development; C:dendrite; C:synaptic vesicle; C:synapse; C:Golgi stack; F:protein binding; P:ER to Golgi vesicle-mediated transport; C:cis-Golgi network; C:membrane; P:neurotransmitter receptor biosynthetic process; C:endoplasmic reticulum    
contig09058 novel protein 621 10 4.43E-29 55.10% 2 F:F; C:C    
contig09059 ---NA--- 102 0     0      
contig09060 ---NA--- 186 0     0      
contig09061 nucleoporin 50kda 267 20 7.03E-24 82.70% 2 P:intracellular transport; C:membrane    
contig09062 ---NA--- 354 0     0      
contig09063 adenylate cyclase 499 20 4.31E-32 64.10% 2 P:cAMP biosynthetic process; F:adenylate cyclase activity    
contig09064 catenin (cadherin-associated protein) beta 88kda 1474 20 4.68E-113 97.55% 60 P:patterning of blood vessels; P:cell maturation; P:camera-type eye morphogenesis; C:beta-catenin destruction complex; F:signal transducer activity; P:endodermal cell fate commitment; P:lung development; P:embryonic digit morphogenesis; P:negative regulation of transcription from RNA polymerase II promoter; F:structural molecule activity; P:ectoderm development; P:regulation of cell proliferation; C:lamellipodium; P:pancreas development; F:protein C-terminus binding; C:catenin complex; P:epithelial to mesenchymal transition; P:bone resorption; P:embryonic hindlimb morphogenesis; P:heart development; F:cadherin binding; C:membrane fraction; P:odontogenesis of dentine-containing tooth; P:cell-cell adhesion; C:basolateral plasma membrane; P:cell fate specification; C:microvillus membrane; P:androgen receptor signaling pathway; P:forebrain development; P:positive regulation of epithelial cell differentiation; F:alpha-catenin binding; P:synaptic vesicle transport; C:desmosome; C:transcription factor complex; P:negative regulation of osteoclast differentiation; C:lateral plasma membrane; F:transcription coactivator activity; P:Wnt receptor signaling pathway through beta-catenin; P:negative regulation of chondrocyte differentiation; C:cytoskeleton; F:transcription factor activity; P:cell fate determination; P:synaptic transmission; P:embryonic axis specification; C:apical part of cell; P:morphogenesis of embryonic epithelium; C:Z disc; P:positive regulation of transcription from RNA polymerase II promoter; F:double-stranded DNA binding; P:synapse organization; P:cell morphogenesis involved in differentiation; P:proximal/distal pattern formation; C:fascia adherens; F:chromatin binding; P:positive regulation of osteoblast differentiation; P:endoderm formation; P:embryonic arm morphogenesis; P:dorsal/ventral axis specification; F:androgen receptor binding; C:cell cortex    
contig09065 ---NA--- 421 0     0      
contig09066 ---NA--- 649 0     0      
contig09067 eukaryotic translation initiation factor subunit j 929 20 3.33E-43 81.90% 2 P:translation; F:translation initiation factor activity EC:3.6.5.3  
contig09068 chromatin modifying protein 4b 1180 20 7.28E-55 94.80% 2 P:protein transport; C:cytoplasm    
contig09069 beta- -mannosyltransferase 639 20 2.36E-82 82.65% 5 C:endoplasmic reticulum membrane; P:lipopolysaccharide biosynthetic process; P:protein amino acid glycosylation; C:integral to membrane; F:chitobiosyldiphosphodolichol beta-mannosyltransferase activity EC:2.4.1.142  
contig09070 protein regulator of cytokinesis 1 171 2 3.25E-05 59.00% 0      
contig09071 chromosome 17 open reading frame 28 834 20 5.29E-58 99.20% 1 C:membrane    
contig09072 ---NA--- 102 0     0      
contig09073 zinc finger ccch-type containing 15 1326 20 3.62E-100 80.40% 3 F:zinc ion binding; F:nucleic acid binding; P:cytokine-mediated signaling pathway    
contig09074 ---NA--- 494 0     0      
contig09075 mgc79666 protein 429 6 9.51E-05 74.17% 1 C:cytoplasm    
contig09076 ---NA--- 336 0     0      
contig09077 ---NA--- 387 0     0      
contig09078 cellular apoptosis susceptibility protein 377 20 5.91E-63 91.15% 7 F:protein transporter activity; P:apoptosis; C:nuclear pore; F:importin-alpha export receptor activity; P:cell proliferation; C:cytoplasm; P:protein import into nucleus, docking    
contig09079 pou domain protein class v transcription factor 1 326 7 7.03E-32 70.57% 9 P:mesoderm development; P:morphogenesis of embryonic epithelium; P:embryonic pattern specification; P:dorsal/ventral pattern formation; P:brain development; F:transcription factor activity; P:endoderm formation; P:ectoderm development; P:positive regulation of transcription, DNA-dependent    
contig09080 transcription factor dp-1 1572 20 5.89E-69 85.55% 10 P:S phase of mitotic cell cycle; P:regulation of transcription from RNA polymerase II promoter; P:apoptosis; C:transcription factor complex; P:epidermis development; F:transcription factor activity; P:transcription antitermination; F:transcription coactivator activity; P:positive regulation of transcription, DNA-dependent; P:cell proliferation    
contig09081 ---NA--- 219 0     0      
contig09082   331              
contig09083 ---NA--- 1167 0     0      
contig09084 ---NA--- 674 0     0      
contig09085 ---NA--- 352 0     0      
contig09086 ---NA--- 220 0     0      
contig09087 ---NA--- 413 0     0      
contig09088 ---NA--- 492 0     0      
contig09089 ---NA--- 451 0     0      
contig09090 ---NA--- 152 0     0      
contig09091 ---NA--- 241 0     0      
contig09092 ---NA--- 274 0     0      
contig09093 lim domain only 4 414 20 1.94E-34 90.05% 15 P:mesoderm development; P:gastrulation; F:transcription cofactor activity; F:iron-sulfur cluster binding; P:forebrain development; F:zinc ion binding; P:zinc ion transport; P:embryonic camera-type eye development; P:positive regulation of transcription from RNA polymerase II promoter; C:transcription factor complex; F:electron carrier activity; F:transcription factor activity; P:electron transport; P:neural tube closure; P:negative regulation of neuron differentiation    
contig09094 dna replication complex gins protein psf1 952 20 2.65E-98 92.15% 5 C:cytoplasm; P:DNA replication; F:protein binding; P:inner cell mass cell proliferation; C:nucleus    
contig09095 ---NA--- 1201 0     0      
contig09096 processing of precursor ribonuclease p mrp subunit ( cerevisiae) 749 20 4.78E-37 72.45% 7 C:ribonuclease MRP complex; F:ribonuclease MRP activity; F:protein binding; C:nucleolar ribonuclease P complex; P:rRNA processing; F:ribonuclease P activity; P:tRNA processing EC:3.1.26.5  
contig09097 ---NA--- 270 0     0      
contig09098 eukaryotic translation initiation factor subunit 5 epsilon 443 20 2.13E-36 79.10% 15 P:response to glucose stimulus; P:ovarian follicle development; P:oligodendrocyte development; P:negative regulation of translational initiation in response to stress; F:translation initiation factor activity; P:positive regulation of translational initiation; P:response to peptide hormone stimulus; F:acyltransferase activity; P:response to heat; F:translation initiation factor binding; P:myelination; P:astrocyte development; C:nucleus; C:eukaryotic translation initiation factor 2B complex; F:guanyl-nucleotide exchange factor activity    
contig09099 ---NA--- 341 0     0      
contig09100 nucleoporin 107 908 20 4.62E-98 80.35% 4 C:nuclear pore; P:intracellular protein transmembrane transport; P:mRNA export from nucleus; F:protein binding    
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