Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 6901 - 7000:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig06901 ---NA--- 277 0     0      
contig06902 zinc fyve domain containing 16 254 20 2.15E-20 91.60% 10 F:phosphatidylinositol binding; F:protein binding; C:early endosome membrane; P:vesicle organization; P:protein targeting to lysosome; F:protein transporter activity; P:endosome transport; P:signal transduction; F:zinc ion binding; P:regulation of endocytosis    
contig06903 zinc finger protein 628 359 2 6.11E-28 74.00% 0      
contig06904 protein phosphatase regulatory subunit b alpha isoform 389 20 4.18E-53 92.45% 5 C:cytoplasm; C:protein phosphatase type 2A complex; P:signal transduction; F:protein binding; F:protein phosphatase type 2A regulator activity    
contig06905 homer 2 isoform 1 271 4 5.21E-11 88.00% 0      
contig06906 retinol dehydrogenase 3 622 20 1.17E-71 77.80% 13 P:endocrine pancreas development; P:retinol metabolic process; P:retinal metabolic process; P:exocrine pancreas development; P:embryonic pectoral fin morphogenesis; F:retinol dehydrogenase activity; P:gut morphogenesis; P:embryonic heart tube development; P:epithelial cell differentiation; P:eye photoreceptor cell differentiation; P:vitamin A biosynthetic process; P:retina development in camera-type eye; P:skeletal system development EC:1.1.1.105  
contig06907 abc1 activity of bc1 complex homolog ( pombe) 286 20 3.66E-28 87.95% 3 F:ATP binding; F:protein kinase activity; C:mitochondrion    
contig06908 sulfide quinone reductase-like 298 20 2.48E-45 88.90% 2 C:mitochondrial inner membrane; F:oxidoreductase activity    
contig06909 ---NA--- 255 0     0      
contig06910 pantothenate kinase 2 (hallervorden-spatz syndrome) 242 19 7.26E-05 72.32% 8 C:mitochondrion; P:coenzyme A biosynthetic process; F:ATP binding; C:cytoplasm; F:transferase activity; F:nucleotide binding; F:pantothenate kinase activity; C:C    
contig06911 ---NA--- 285 0     0      
contig06912 ---NA--- 304 0     0      
contig06913 ---NA--- 281 0     0      
contig06914 yme1-like 1 ( cerevisiae) 255 20 4.18E-24 87.50% 8 F:metalloendopeptidase activity; P:protein catabolic process; F:ATP binding; F:nucleoside-triphosphatase activity; P:proteolysis; C:membrane; F:zinc ion binding; C:mitochondrion EC:3.4.24.0; EC:3.6.1.15  
contig06915 ---NA--- 249 0     0      
contig06916 ---NA--- 242 0     0      
contig06917 ---NA--- 256 0     0      
contig06918 ---NA--- 534 0     0      
contig06919 f-actin-capping protein subunit beta 493 20 1.15E-44 87.55% 5 P:wing disc development; P:actin filament organization; F:actin binding; P:regulation of actin filament length; C:F-actin capping protein complex    
contig06920 tetratricopeptide repeat domain 37 248 20 3.94E-19 64.45% 1 F:binding    
contig06921 unnamed protein product [Tetraodon nigroviridis] 338 2 1.36E-11 60.50% 0      
contig06922 ---NA--- 266 0     0      
contig06923 ---NA--- 261 0     0      
contig06924 leucine-rich repeat kinase 1 406 20 3.03E-35 55.50% 0      
contig06925 antigenic determinant of reca protein homolog 258 20 2.98E-22 85.80% 9 C:cytoplasm; P:DNA replication; F:RNA binding; P:mRNA processing; C:nuclear matrix; F:zinc ion binding; F:double-stranded DNA binding; P:DNA recombination; P:DNA repair    
contig06926 ---NA--- 288 0     0      
contig06927 ---NA--- 260 0     0      
contig06928 chromosome 19 open reading frame 62 253 20 1.71E-17 88.25% 1 F:protein binding    
contig06929 elovl family member elongation of long chain fatty acids 354 20 4.23E-45 90.30% 3 C:endoplasmic reticulum membrane; P:fatty acid biosynthetic process; C:integral to membrane    
contig06930 ---NA--- 257 0     0      
contig06931 tea domain family member 3 245 20 1.14E-34 72.30% 3 F:RNA polymerase II transcription factor activity; P:female pregnancy; P:regulation of transcription, DNA-dependent    
contig06932 o-sialoglycoprotein endopeptidase 342 20 1.69E-49 91.80% 6 C:cytoplasm; F:protein binding; P:proteolysis; C:nucleus; F:zinc ion binding; F:O-sialoglycoprotein endopeptidase activity EC:3.4.24.57  
contig06933 ccr4-not transcription subunit 3 243 20 1.55E-31 95.55% 4 C:cytoplasm; F:transcription regulator activity; C:nucleus; P:regulation of transcription, DNA-dependent    
contig06934 ---NA--- 148 0     0      
contig06935 gatad2a protein 225 20 1.43E-24 68.65% 9 P:programmed cell death; P:anterior neuropore closure; P:neural fold formation; F:metal ion binding; F:DNA binding; P:embryonic body morphogenesis; P:blood vessel development; P:in utero embryonic development; P:transcription    
contig06936 ---NA--- 273 0     0      
contig06937 ---NA--- 261 0     0      
contig06938 ---NA--- 249 0     0      
contig06939 ---NA--- 255 0     0      
contig06940 subfamily member 3 441 20 9.26E-32 73.95% 9 P:regulation of apoptosis; F:small GTPase regulator activity; P:protein folding; F:metal ion binding; C:mitochondrial matrix; F:unfolded protein binding; C:nucleus; C:cytosol; P:small GTPase mediated signal transduction    
contig06941 essential meiotic endonuclease 1 homolog 1 ( pombe) 277 20 1.56E-07 81.85% 9 P:DNA recombination; C:nucleus; F:hydrolase activity; P:response to DNA damage stimulus; P:DNA repair; F:endonuclease activity; F:metal ion binding; F:magnesium ion binding; F:nuclease activity    
contig06942 ---NA--- 340 0     0      
contig06943 ---NA--- 281 0     0      
contig06944 obg-like atpase 1 240 20 5.54E-21 85.80% 3 F:ATP binding; C:intracellular; F:GTP binding    
contig06945 ---NA--- 256 0     0      
contig06946 loc100145233 protein 465 20 3.07E-27 55.00% 0      
contig06947 ---NA--- 272 0     0      
contig06948 ---NA--- 255 0     0      
contig06949 ---NA--- 367 0     0      
contig06950 tuberous sclerosis 2 isoform 2 217 20 2.54E-26 83.15% 20 P:negative regulation of cell size; P:cell projection organization; P:positive chemotaxis; P:protein import into nucleus; P:negative regulation of phosphoinositide 3-kinase cascade; P:heart development; P:negative regulation of cell proliferation; P:negative regulation of protein kinase activity; F:receptor binding; P:negative regulation of protein kinase B signaling cascade; P:positive regulation of GTPase activity; P:regulation of small GTPase mediated signal transduction; P:regulation of endocytosis; P:negative regulation of cell cycle; F:GTPase activator activity; C:cytoplasm; P:regulation of insulin receptor signaling pathway; P:insulin-like growth factor receptor signaling pathway; C:membrane; C:nucleus    
contig06951 ---NA--- 206 0     0      
contig06952 prp4 pre-mrna processing factor 4 homolog b 556 20 8.01E-21 53.60% 6 ; F:protein kinase activity; P:cellular metabolic process; C:intracellular organelle; P:primary metabolic process; F:nucleotide binding    
contig06953 ---NA--- 279 0     0      
contig06954 ---NA--- 254 0     0      
contig06955 ---NA--- 104 0     0      
contig06956 dual specificity phosphatase 2 321 2 1.43E-21 89.50% 2 P:dephosphorylation; F:MAP kinase tyrosine/serine/threonine phosphatase activity    
contig06957 ---NA--- 258 0     0      
contig06958 ---NA--- 251 0     0      
contig06959 l-ribulose-5-phosphate 3-epimerase 270 20 1.55E-47 99.50% 5 P:carbohydrate metabolic process; F:L-ribulose-5-phosphate 3-epimerase activity; P:L-ascorbic acid metabolic process; F:protein binding; F:intramolecular oxidoreductase activity, interconverting aldoses and ketoses EC:5.1.3.22; EC:5.3.1.0  
contig06960 cndp dipeptidase 2 (metallopeptidase m20 family) 264 7 2.49E-05 97.14% 7 P:proteolysis; F:metallopeptidase activity; F:hydrolase activity; F:cytosol nonspecific dipeptidase activity; F:protein dimerization activity; F:dipeptidase activity; C:C    
contig06961 adenosine kinase 419 20 7.32E-45 95.20% 4 P:purine ribonucleoside salvage; P:ribonucleoside monophosphate biosynthetic process; F:magnesium ion binding; F:adenosine kinase activity EC:2.7.1.20  
contig06962 ---NA--- 290 0     0      
contig06963 cyclin y-like 1 240 7 4.39E-18 77.14% 1 C:C    
contig06964 breast cancer early onset 243 20 1.19E-31 76.55% 12 P:postreplication repair; F:zinc ion binding; P:cell cycle; P:positive regulation of protein ubiquitination; P:chromosome segregation; P:double-strand break repair via homologous recombination; F:DNA binding; F:ubiquitin-protein ligase activity; F:protein binding; P:negative regulation of fatty acid biosynthetic process; P:negative regulation of transcription; C:nucleus EC:6.3.2.19  
contig06965 ---NA--- 260 0     0      
contig06966 ---NA--- 259 0     0      
contig06967 ---NA--- 283 0     0      
contig06968 ---NA--- 157 0     0      
contig06969 u2 small nuclear rna auxiliary factor 1-like 2 178 20 3.11E-24 75.80% 6 C:nucleolus; P:RNA splicing; F:RNA binding; F:zinc ion binding; C:U12-type spliceosomal complex; F:nucleotide binding    
contig06970 ---NA--- 270 0     0      
contig06971 ---NA--- 249 0     0      
contig06972 ---NA--- 249 0     0      
contig06973 ---NA--- 276 0     0      
contig06974 ---NA--- 286 0     0      
contig06975 ---NA--- 306 0     0      
contig06976 ---NA--- 287 0     0      
contig06977 ---NA--- 259 0     0      
contig06978 ---NA--- 314 0     0      
contig06979 peroxisomal coenzyme a diphosphatase nudt7 283 3 7.65E-15 81.67% 0      
contig06980 ---NA--- 254 0     0      
contig06981 ---NA--- 261 0     0      
contig06982 ---NA--- 271 0     0      
contig06983 serum response factor binding protein 1 304 11 4.86E-09 75.64% 5 P:regulation of transcription, DNA-dependent; F:F; C:cytoplasm; P:transcription; P:P    
contig06984 ---NA--- 263 0     0      
contig06985 ---NA--- 629 0     0      
contig06986 ---NA--- 426 0     0      
contig06987 zinc finger and btb domain containing 11 356 20 2.24E-54 63.25% 1 F:binding    
contig06988 ---NA--- 237 0     0      
contig06989 ---NA--- 281 0     0      
contig06990 acyl- synthetase family member 3 259 20 7.59E-26 82.50% 3 P:fatty acid metabolic process; C:mitochondrion; F:acid-thiol ligase activity EC:6.2.1.0  
contig06991 integrator complex subunit 4 227 20 8.10E-28 88.10% 3 F:protein binding; P:snRNA processing; C:integrator complex    
contig06992 calreticulin 248 20 6.24E-41 88.55% 4 P:protein folding; C:endoplasmic reticulum; F:unfolded protein binding; F:calcium ion binding    
contig06993 sister chromatid cohesion protein 246 20 4.05E-40 97.20% 2 C:extracellular region; F:binding    
contig06994 phospholipase c-like 2 241 20 8.80E-35 91.50% 6 F:signal transducer activity; C:cytoplasm; ; F:calcium ion binding; P:lipid metabolic process; F:phosphoinositide phospholipase C activity EC:3.1.4.11  
contig06995 cdh1 protein 380 20 1.98E-18 57.50% 15 P:regulation of caspase activity; P:cell-cell adhesion; C:lateral plasma membrane; F:beta-catenin binding; F:calcium ion binding; C:integral to membrane; P:positive regulation of transcription factor import into nucleus; C:cell-cell adherens junction; P:protein homooligomerization; C:extracellular space; F:transcription activator activity; C:actin cytoskeleton; C:perinuclear region of cytoplasm; C:basolateral plasma membrane; C:apical part of cell    
contig06996 ---NA--- 303 0     0      
contig06997 ---NA--- 288 0     0      
contig06998 ---NA--- 269 0     0      
contig06999 ribonuclease subunit b 364 20 9.71E-18 69.90% 3 F:F; P:P; C:nucleus    
contig07000 rad17 homolog 246 20 1.11E-21 75.85% 5 P:cell cycle; F:ATP binding; F:nucleoside-triphosphatase activity; P:response to DNA damage stimulus; C:nucleus EC:3.6.1.15  
100 Rows returned.
Go to records:
1-100, 101-200, 201-300, 301-400, 401-500, 501-600, 601-700, 701-800, 801-900, 901-1000, 1001-1100, 1101-1200, 1201-1300, 1301-1400, 1401-1500, 1501-1600, 1601-1700, 1701-1800, 1801-1900, 1901-2000, 2001-2100, 2101-2200, 2201-2300, 2301-2400, 2401-2500, 2501-2600, 2601-2700, 2701-2800, 2801-2900, 2901-3000, 3001-3100, 3101-3200, 3201-3300, 3301-3400, 3401-3500, 3501-3600, 3601-3700, 3701-3800, 3801-3900, 3901-4000, 4001-4100, 4101-4200, 4201-4300, 4301-4400, 4401-4500, 4501-4600, 4601-4700, 4701-4800, 4801-4900, 4901-5000, 5001-5100, 5101-5200, 5201-5300, 5301-5400, 5401-5500, 5501-5600, 5601-5700, 5701-5800, 5801-5900, 5901-6000, 6001-6100, 6101-6200, 6201-6300, 6301-6400, 6401-6500, 6501-6600, 6601-6700, 6701-6800, 6801-6900, 6901-7000, 7001-7100, 7101-7200, 7201-7300, 7301-7400, 7401-7500, 7501-7600, 7601-7700, 7701-7800, 7801-7900, 7901-8000, 8001-8100, 8101-8200, 8201-8300, 8301-8400, 8401-8500, 8501-8600, 8601-8700, 8701-8800, 8801-8900, 8901-9000, 9001-9100, 9101-9200, 9201-9300, 9301-9400, 9401-9500, 9501-9600, 9601-9700, 9701-9800, 9801-9900, 9901-10000, 10001-10100, 10101-10200, 10201-10300, 10301-10400, 10401-10500, 10501-10600, 10601-10700, 10701-10800, 10801-10900, 10901-11000, 11001-11100, 11101-11200, 11201-11208
Web Access Statistics © 2003-2025 NAGRP - Bioinformatics Coordination Program.
Contact: NAGRP Bioinformatics Team 		Helpdesk