Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 6501 - 6600:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig06501 cytoplasmic intermediate chain 2 365 20 1.03E-51 95.30% 3 C:dynein complex; C:microtubule; F:motor activity    
contig06502 acyl- synthetase long-chain family member 6 isoform b 363 20 2.44E-28 91.05% 11 F:long-chain-fatty-acid-CoA ligase activity; C:integral to membrane; P:acyl-CoA metabolic process; C:peroxisomal membrane; C:mitochondrial outer membrane; C:microsome; F:protein binding; F:magnesium ion binding; P:neuroblast proliferation; C:endoplasmic reticulum membrane; C:plasma membrane EC:6.2.1.3  
contig06503 ---NA--- 262 0     0      
contig06504 tripartite motif-containing 2 313 20 5.60E-50 69.10% 3 C:cytoplasm; F:myosin binding; F:zinc ion binding    
contig06505 ---NA--- 248 0     0      
contig06506 ---NA--- 1826 0     0      
contig06507 chromosome 4 open reading frame 34 294 20 5.06E-22 79.15% 2 F:protein binding; C:integral to membrane    
contig06508 microtubule-associated rp eb member like 181 7 1.60E-04 88.86% 1 F:microtubule binding    
contig06509 loc553272 protein 241 7 3.35E-26 64.57% 2 P:P; C:C    
contig06510 fc fragment of binding protein 421 20 2.70E-15 53.70% 4 P:binding of sperm to zona pellucida; P:cell adhesion; C:membrane; C:extracellular region    
contig06511 ---NA--- 162 0     0      
contig06512 ---NA--- 307 0     0      
contig06513 ---NA--- 284 0     0      
contig06514 ---NA--- 408 0     0      
contig06515 ---NA--- 145 0     0      
contig06516 ---NA--- 245 0     0      
contig06517 ubiquinol-cytochrome c reductase core protein ii 261 20 2.36E-19 75.75% 4 C:mitochondrial inner membrane; F:metalloendopeptidase activity; F:protein binding; F:zinc ion binding EC:3.4.24.0  
contig06518 ---NA--- 260 0     0      
contig06519 ---NA--- 245 0     0      
contig06520 interferon regulatory factor 6 247 3 5.48E-29 58.33% 1 P:transcription, DNA-dependent    
contig06521 ---NA--- 243 0     0      
contig06522 ---NA--- 485 0     0      
contig06523 protein (peptidyl-prolyl cis trans isomerase) nima- 4 739 20 2.94E-51 95.80% 3 P:protein folding; C:mitochondrial matrix; F:peptidyl-prolyl cis-trans isomerase activity EC:5.2.1.8  
contig06524 cysteine-rich with egf-like domains 1 312 20 3.93E-11 80.05% 9 F:calcium channel activity; P:calcium ion transport; F:calcium ion binding; C:signal recognition particle, endoplasmic reticulum targeting; C:integral to membrane; C:extracellular region; P:negative regulation of signal transduction; F:calcium channel inhibitor activity; C:endoplasmic reticulum EC:3.6.5.4  
contig06525 ---NA--- 249 0     0      
contig06526 ogdh protein 243 20 1.00E-30 83.90% 5 F:oxoglutarate dehydrogenase (succinyl-transferring) activity; C:mitochondrial matrix; P:glycolysis; F:thiamin pyrophosphate binding; F:oxoglutarate dehydrogenase (NADP+) activity EC:1.2.4.2; EC:1.2.1.52  
contig06527 chromosome 13 open reading frame 34 protein 249 20 1.95E-18 65.25% 1 P:cell cycle    
contig06528 iodotyrosine deiodinase 301 20 5.55E-21 93.90% 4 C:integral to membrane; C:microsome; F:iodide peroxidase activity; P:electron transport EC:1.11.1.8  
contig06529 asparagine-linked glycosylation 3 homolog ( alpha- -mannosyltransferase) 243 20 6.76E-11 88.55% 5 F:mannosyltransferase activity; P:protein amino acid N-linked glycosylation; F:glucosyltransferase activity; C:integral to membrane; C:endoplasmic reticulum    
contig06530 dynein cytoplasmic 1 intermediate chain 2 237 20 3.68E-08 91.40% 3 C:dynein complex; C:microtubule; F:motor activity    
contig06531 ---NA--- 281 0     0      
contig06532 ---NA--- 278 0     0      
contig06533 ---NA--- 298 0     0      
contig06534 ---NA--- 246 0     0      
contig06535 ---NA--- 484 0     0      
contig06536 ---NA--- 259 0     0      
contig06537 nudix (nucleoside diphosphate linked moiety x)-type motif 15 403 20 9.85E-18 78.90% 4 F:metal ion binding; P:purine deoxyribonucleoside triphosphate catabolic process; F:8-oxo-7,8-dihydroguanine triphosphatase activity; P:response to reactive oxygen species    
contig06538 transmembrane protein 209 254 20 6.71E-14 88.30% 0      
contig06539 ---NA--- 295 0     0      
contig06540 ---NA--- 506 0     0      
contig06541 origin recognition subunit 4-like 257 20 1.10E-32 89.30% 6 P:DNA replication initiation; F:DNA replication origin binding; F:protein binding; F:ATP binding; F:nucleoside-triphosphatase activity; C:nucleus EC:3.6.1.15  
contig06542 ---NA--- 263 0     0      
contig06543 ---NA--- 294 0     0      
contig06544 mitochondrial ribosomal protein l23 276 20 1.60E-20 88.55% 6 C:mitochondrial large ribosomal subunit; P:ribosome biogenesis; F:structural constituent of ribosome; F:RNA binding; P:translation; F:nucleotide binding EC:3.6.5.3  
contig06545 ---NA--- 280 0     0      
contig06546 beta lysosomal 159 3 1.48E-13 67.00% 4 F:hydrolase activity, hydrolyzing O-glycosyl compounds; F:cation binding; F:catalytic activity; C:C    
contig06547 ---NA--- 724 0     0      
contig06548 novel protein family with sequence similarity member a 242 3 1.41E-08 70.33% 0      
contig06549 suppression of tumorigenicity isoform a 293 20 1.02E-30 100.00% 1 P:P    
contig06550 ubiquitin protein ligase e3 component n-recognin 5 269 20 1.82E-32 91.10% 11 C:soluble fraction; P:cell proliferation; F:protein binding; P:progesterone receptor signaling pathway; P:ubiquitin-dependent protein catabolic process; P:ubiquitin cycle; F:ubiquitin-protein ligase activity; P:mRNA metabolic process; P:response to DNA damage stimulus; C:nucleus; F:zinc ion binding EC:6.3.2.19  
contig06551 ribosomal protein s6 polypeptide 1 249 20 3.01E-11 73.50% 3 P:protein amino acid phosphorylation; F:protein serine/threonine kinase activity; F:nucleotide binding EC:2.7.11.0  
contig06552 glutamic pyruvate transaminase 2 238 20 6.75E-35 87.10% 4 F:pyridoxal phosphate binding; F:L-alanine:2-oxoglutarate aminotransferase activity; F:obs-aminocyclopropane-1-carboxylate synthase activity; P:biosynthetic process EC:2.6.1.2; EC:4.4.1.14  
contig06553 ---NA--- 276 0     0      
contig06554 dead (asp-glu-ala-asp) box polypeptide 28 253 20 8.46E-17 68.45% 1 F:catalytic activity    
contig06555 ---NA--- 284 0     0      
contig06556 novel protein vertebrate solute carrier family 10 (sodium bile acid cotransporter family) member 4 249 4 1.18E-15 82.75% 2 F:bile acid:sodium symporter activity; P:sodium ion transport    
contig06557 ---NA--- 265 0     0      
contig06558 ---NA--- 249 0     0      
contig06559 acetyl-coenzyme a acyltransferase 2 392 20 2.01E-39 92.55% 4 C:mitochondrial inner membrane; P:cholesterol biosynthetic process; P:fatty acid metabolic process; F:acetyl-CoA C-acyltransferase activity EC:2.3.1.16  
contig06560 cullin 3 105 5 2.82E-12 98.20% 2 F:ubiquitin protein ligase binding; C:cullin-RING ubiquitin ligase complex    
contig06561 ---NA--- 181 0     0      
contig06562 ---NA--- 168 0     0      
contig06563 PREDICTED: hypothetical protein [Danio rerio] 224 1 5.66E-13 86.00% 0      
contig06564 ---NA--- 276 0     0      
contig06565 zinc finger protein zf -70 384 20 1.01E-06 50.40% 6 P:reproduction; F:nucleic acid binding; P:locomotion; P:positive regulation of growth rate; F:zinc ion binding; C:intracellular    
contig06566 ---NA--- 288 0     0      
contig06567 ---NA--- 269 0     0      
contig06568 trna splicing endonuclease 54 homolog 253 20 2.01E-34 66.30% 3 F:GTP binding; C:signal recognition particle, endoplasmic reticulum targeting; P:protein targeting EC:3.6.5.4  
contig06569 ---NA--- 367 0     0      
contig06570 ---NA--- 281 0     0      
contig06571 ---NA--- 372 0     0      
contig06572 gtp binding protein 4 240 20 1.50E-34 97.90% 15 P:negative regulation of cell migration; P:negative regulation of DNA replication; P:small GTPase mediated signal transduction; P:ribosome biogenesis; P:protein stabilization; P:negative regulation of cell proliferation; F:protein binding; P:negative regulation of collagen binding; F:GTPase activity; P:negative regulation of protein ubiquitination; C:perinuclear region of cytoplasm; P:regulation of cyclin-dependent protein kinase activity; P:negative regulation of cell-cell adhesion; C:nucleus; F:GTP binding EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig06573 sodium-potassium-chloride cotransporter 239 20 1.47E-13 91.20% 10 C:basolateral plasma membrane; F:cation:chloride symporter activity; C:apical plasma membrane; F:protein binding; F:potassium ion binding; F:sodium ion binding; P:potassium ion transport; C:integral to membrane; P:sodium ion transport; P:chloride transport    
contig06574 ---NA--- 244 0     0      
contig06575 ---NA--- 271 0     0      
contig06576 lysosomal-associated membrane protein 1 241 7 2.40E-24 64.71% 9 C:endosome membrane; C:integral to membrane; C:membrane; C:endosome; F:F; C:lysosomal membrane; C:lysosome; C:plasma membrane; P:P    
contig06577 spartin 251 20 5.84E-31 89.95% 0      
contig06578 lysyl-trna synthetase 234 20 1.73E-30 86.60% 5 C:cytoplasm; F:nucleic acid binding; F:lysine-tRNA ligase activity; P:lysyl-tRNA aminoacylation; F:ATP binding EC:6.1.1.6  
contig06579 isoform 3 283 20 2.54E-18 75.65% 0      
contig06580 ---NA--- 105 0     0      
contig06581 k0841 protein 276 2 1.15E-18 78.00% 2 F:F; C:C    
contig06582 subfamily member 3a 462 20 2.89E-25 89.30% 10 F:small GTPase regulator activity; F:metal ion binding; P:protein folding; P:apoptosis; C:mitochondrial matrix; F:heat shock protein binding; F:unfolded protein binding; C:nucleus; C:cytosol; P:small GTPase mediated signal transduction    
contig06583 sumo1 sentrin specific protease 6 259 20 1.87E-24 61.25% 8 F:nucleic acid binding; P:proteolysis; F:hydrolase activity; F:cysteine-type peptidase activity; F:peptidase activity; F:zinc ion binding; P:ubiquitin cycle; C:nucleus    
contig06584 ---NA--- 254 0     0      
contig06585 kh domain rna signal transduction associated 1 430 20 3.93E-59 89.60% 17 P:cell cycle arrest; F:RNA binding; F:SH3/SH2 adaptor activity; P:G2/M transition of mitotic cell cycle; P:regulation of transcription, DNA-dependent; P:cell surface receptor linked signaling pathway; P:regulation of RNA export from nucleus; F:transcription repressor activity; F:DNA binding; P:regulation of signal transduction; F:transporter activity; P:negative regulation of transcription; P:mRNA processing; P:cell proliferation; C:cytoplasm; C:membrane; C:nucleus    
contig06586 general transcription factor polypeptide 52kda 263 20 5.07E-22 87.95% 54 F:valine-tRNA ligase activity; C:MHC class I protein complex; P:protein amino acid glycosylation; P:protein amino acid phosphorylation; P:protein folding; F:zinc ion binding; C:actin filament; F:tumor necrosis factor receptor binding; F:steroid hormone receptor activity; P:cell adhesion; P:transcription from RNA polymerase II promoter; C:MHC class II protein complex; P:metal ion transport; C:phagocytic cup; C:PML body; ; P:regulation of small GTPase mediated signal transduction; F:ganglioside galactosyltransferase activity; P:immune response; P:cell morphogenesis; F:metal ion transmembrane transporter activity; P:phosphate transport; F:extracellular matrix structural constituent; C:extracellular space; F:protein N-terminus binding; P:androgen receptor signaling pathway; F:calcium ion binding; C:integral to membrane; P:negative regulation of transcription, DNA-dependent; C:Golgi apparatus; P:transmembrane receptor protein tyrosine kinase signaling pathway; F:RNA polymerase II transcription factor activity; C:holo TFIIH complex; C:ruffle; C:prefoldin complex; F:sequence-specific DNA binding; P:valyl-tRNA aminoacylation; P:apoptosis; F:steroid binding; C:heterochromatin; F:unfolded protein binding; F:transcription factor activity; P:cytokinesis after mitosis; F:transmembrane receptor protein tyrosine kinase activity; P:antigen processing and presentation of endogenous peptide antigen via MHC class I; C:collagen; F:protein homodimerization activity; F:transcription factor binding; F:ATP binding; P:actin filament bundle assembly; F:androgen receptor binding; F:transcription repressor activity; P:DNA repair; F:guanyl-nucleotide exchange factor activity EC:6.1.1.9; EC:2.4.1.62; EC:2.7.10.1  
contig06587 importin alpha subunit 166 3 1.92E-05 72.00% 7 F:binding; C:nuclear pore; C:cytoplasm; P:intracellular protein transport; C:nucleus; P:protein import into nucleus; F:protein transporter activity    
contig06588 lamina-associated polypeptide 2 isoform beta 406 20 1.19E-47 78.35% 5 C:nuclear membrane-endoplasmic reticulum network; F:chromatin binding; C:condensed chromosome; P:mitotic nuclear envelope reassembly; C:integral to membrane    
contig06589 ---NA--- 431 0     0      
contig06590 small nuclear rna activating polypeptide 3 252 10 9.66E-21 51.30% 4 P:regulation of transcription, DNA-dependent; P:transcription; C:nucleus; F:DNA binding    
contig06591 ---NA--- 255 0     0      
contig06592 ---NA--- 249 0     0      
contig06593 ---NA--- 316 0     0      
contig06594 moloney leukemia virus 10-like homolog 379 20 2.58E-34 71.35% 11 P:spermatogenesis; F:ATP-dependent RNA helicase activity; P:cell proliferation; F:DNA binding; C:intracellular; F:RNA binding; P:muscle organ development; P:germ cell development; F:ATP binding; F:magnesium ion binding; P:negative regulation of cell cycle    
contig06595 novel protein cytochrome family subfamily j 574 20 3.38E-47 84.35% 7 P:heme biosynthetic process; P:cellular iron ion homeostasis; F:iron ion binding; F:heme binding; P:electron transport; P:iron ion transport; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen EC:1.14.14.0  
contig06596 mad2 mitotic arrest deficient-like 2 305 20 5.01E-14 99.55% 4 P:mitotic cell cycle spindle assembly checkpoint; P:mitosis; F:protein binding; P:cell division    
contig06597 ---NA--- 292 0     0      
contig06598 ---NA--- 376 0     0      
contig06599 ---NA--- 379 0     0      
contig06600 ---NA--- 207 0     0      
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