Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 6301 - 6400:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig06301 ---NA--- 261 0     0      
contig06302 ---NA--- 477 0     0      
contig06303 ---NA--- 202 0     0      
contig06304 ---NA--- 393 0     0      
contig06305 ---NA--- 294 0     0      
contig06306 likely ortholog of sapiens chromosome 9 open reading frame 5 246 20 1.15E-18 67.10% 1 C:membrane    
contig06307 ---NA--- 254 0     0      
contig06308 ---NA--- 262 0     0      
contig06309 programmed cell death 4 250 20 4.05E-24 81.55% 5 P:apoptosis; F:RNA binding; C:cytoplasm; P:negative regulation of cell cycle; C:nucleus    
contig06310 ---NA--- 250 0     0      
contig06311 creatine testis isozyme 245 20 3.12E-32 96.55% 6 F:creatine kinase activity; F:protein binding; P:cellular chloride ion homeostasis; F:ATP binding; P:brain development; C:mitochondrion EC:2.7.3.2  
contig06312 ---NA--- 692 0     0      
contig06313 ---NA--- 313 0     0      
contig06314 neural precursor cell developmentally down-regulated 1 408 20 1.70E-54 76.90% 2 F:F; P:P    
contig06315 ---NA--- 287 0     0      
contig06316 ---NA--- 336 0     0      
contig06317 ---NA--- 397 0     0      
contig06318 flavoprotein oxidoreductase 241 20 4.53E-23 81.30% 5 C:cytoskeleton; C:cytoplasm; F:monooxygenase activity; F:zinc ion binding; P:cellular aromatic compound metabolic process    
contig06319 novel protein vertebrate actin binding protein (scraps drosophila) 261 20 1.74E-22 73.05% 2 P:cell cycle; C:intracellular organelle    
contig06320 novel protein 417 20 2.28E-46 84.50% 4 P:glycerol metabolic process; P:carbohydrate metabolic process; F:glycerophosphodiester phosphodiesterase activity; F:carbohydrate binding EC:3.1.4.46  
contig06321 ---NA--- 269 0     0      
contig06322 ---NA--- 335 0     0      
contig06323 ---NA--- 267 0     0      
contig06324 ---NA--- 252 0     0      
contig06325 ---NA--- 260 0     0      
contig06326 dep domain containing 7 351 20 1.38E-11 74.70% 4 ; F:F; P:P; C:C    
contig06327 poly (adp-ribose) polymerase member 12 254 20 1.11E-16 56.20% 6 F:metal ion binding; F:nucleic acid binding; F:NAD+ ADP-ribosyltransferase activity; F:transferase activity; F:zinc ion binding; C:nucleus    
contig06328 ---NA--- 257 0     0      
contig06329 brefeldin a-inhibited guanine nucleotide-exchange protein 1 281 20 9.03E-32 62.80% 7 F:myosin binding; F:F; F:binding; P:regulation of ARF protein signal transduction; F:ARF guanyl-nucleotide exchange factor activity; C:C; C:intracellular    
contig06330 fer-1-like myoferlin ( elegans) 244 20 8.81E-19 85.20% 5 C:integral to membrane; P:blood circulation; C:nuclear membrane; C:plasma membrane; P:muscle contraction    
contig06331 thioredoxin domain containing 1 252 20 5.14E-14 89.05% 16 C:integral to membrane; P:cell redox homeostasis; P:DNA replication; F:electron carrier activity; P:anti-apoptosis; C:membrane fraction; P:positive regulation of growth; F:arsenate reductase (thioredoxin) activity; P:ER to Golgi vesicle-mediated transport; P:signal transduction; F:thiol-disulfide exchange intermediate activity; P:positive regulation of transcription, DNA-dependent; P:cell proliferation; P:leukocyte activation; C:endoplasmic reticulum membrane; P:response to stress    
contig06332 sortilin-related vps10 domain containing receptor 2 240 20 3.24E-21 71.90% 3 C:integral to membrane; F:receptor activity; F:sugar binding    
contig06333 ribose 5-phosphate isomerase a 258 20 8.34E-41 86.25% 6 C:soluble fraction; P:pentose-phosphate shunt, non-oxidative branch; C:microsome; F:monosaccharide binding; P:ribose phosphate metabolic process; F:ribose-5-phosphate isomerase activity EC:5.3.1.6  
contig06334 ---NA--- 242 0     0      
contig06335 ---NA--- 248 0     0      
contig06336 lambda 1 427 20 1.09E-24 73.35% 1 F:oxidoreductase activity    
contig06337 ---NA--- 258 0     0      
contig06338 phosphatidylinositol 4- beta 242 20 4.21E-37 97.05% 6 P:phosphoinositide phosphorylation; F:obs-phosphatidylinositol 4-kinase activity; P:phosphoinositide-mediated signaling; C:membrane; C:endoplasmic reticulum; C:mitochondrion EC:2.7.1.67  
contig06339 programmed cell death 8 (apoptosis-inducing factor) 630 20 2.84E-08 64.95% 15 F:electron-transferring-flavoprotein dehydrogenase activity; P:DNA fragmentation involved in apoptosis; C:mitochondrion; F:FAD binding; F:DNA binding; C:mitochondrial outer membrane; P:apoptosis; P:apoptotic mitochondrial changes; C:cytoplasm; C:microsome; F:oxidoreductase activity; C:soluble fraction; C:mitochondrial intermembrane space; P:cell redox homeostasis; C:cytosol    
contig06340 ---NA--- 269 0     0      
contig06341 akirin 2 356 20 2.41E-32 85.00% 2 F:F; P:P    
contig06342 ---NA--- 300 0     0      
contig06343 ---NA--- 276 0     0      
contig06344 ---NA--- 273 0     0      
contig06345 ---NA--- 291 0     0      
contig06346 ---NA--- 446 0     0      
contig06347 ---NA--- 241 0     0      
contig06348 b-cell translocation gene anti-proliferative 303 20 5.53E-21 66.55% 12 P:cell migration; F:transcription cofactor activity; F:kinase binding; P:negative regulation of cell growth; P:regulation of apoptosis; P:positive regulation of angiogenesis; P:regulation of transcription; P:spermatid development; P:negative regulation of cell proliferation; P:positive regulation of endothelial cell differentiation; C:intracellular part; P:protein amino acid methylation    
contig06349 zinc finger protein 235 258 20 8.99E-19 56.50% 3 F:nucleic acid binding; C:intracellular; P:transcription    
contig06350 ---NA--- 273 0     0      
contig06351 ---NA--- 240 0     0      
contig06352 ---NA--- 290 0     0      
contig06353 crooked neck pre-mrna splicing factor-like 1 394 20 2.68E-63 62.30% 3 P:RNA splicing; P:mRNA processing; C:nucleus    
contig06354 cytochrome ascorbate dependent 3 318 20 2.78E-28 78.45% 8 C:lysosome; P:heme biosynthetic process; P:cellular iron ion homeostasis; C:endosome; F:oxidoreductase activity; C:membrane attack complex; P:iron ion transport; F:iron ion binding    
contig06355 ---NA--- 247 0     0      
contig06356 leucine rich repeat containing 61 364 20 1.30E-54 78.10% 3 P:P; F:protein binding; C:C    
contig06357 ---NA--- 351 0     0      
contig06358 ---NA--- 276 0     0      
contig06359 translation initiation factor if- mitochondrial precursor 262 1 6.86E-19 73.00% 0      
contig06360 ---NA--- 331 0     0      
contig06361 ---NA--- 243 0     0      
contig06362 lin-52 homolog 319 20 9.23E-40 97.95% 1 P:multicellular organismal development    
contig06363 ---NA--- 237 0     0      
contig06364 ---NA--- 266 0     0      
contig06365 ubiquitin carboxyl-terminal esterase l3 250 20 3.67E-25 84.90% 6 C:cytoplasm; P:protein deubiquitination; P:eating behavior; P:ubiquitin-dependent protein catabolic process; F:ubiquitin thiolesterase activity; P:adult walking behavior EC:3.1.2.15  
contig06366 ---NA--- 296 0     0      
contig06367 ---NA--- 189 0     0      
contig06368 ---NA--- 282 0     0      
contig06369 ubiquitin specific peptidase 7 259 20 2.79E-20 91.35% 7 C:cytoplasm; P:protein deubiquitination; P:ubiquitin-dependent protein catabolic process; F:ubiquitin thiolesterase activity; F:cysteine-type endopeptidase activity; F:protein C-terminus binding; C:nucleus EC:3.1.2.15; EC:3.4.22.0  
contig06370 loc152217 protein 291 8 2.60E-26 63.63% 0      
contig06371 ---NA--- 362 0     0      
contig06372 ---NA--- 253 0     0      
contig06373 ---NA--- 567 0     0      
contig06374 ---NA--- 253 0     0      
contig06375 ---NA--- 274 0     0      
contig06376 ---NA--- 255 0     0      
contig06377 member ras oncogene family 261 20 2.67E-39 96.85% 14 F:protein transporter activity; P:two-component signal transduction system (phosphorelay); P:small GTPase mediated signal transduction; P:regulation of transcription, DNA-dependent; F:DNA binding; F:ATP binding; P:ER to Golgi vesicle-mediated transport; F:GTPase activity; F:transcription factor binding; P:intracellular protein transport; C:Golgi apparatus; C:endoplasmic reticulum; F:GTP binding; C:plasma membrane EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig06378 ---NA--- 270 0     0      
contig06379 sv2 related protein 242 20 1.19E-23 78.65% 6 F:ion transmembrane transporter activity; C:cell junction; C:synaptic vesicle; P:ion transport; C:integral to membrane; C:synapse    
contig06380 ---NA--- 266 0     0      
contig06381 ---NA--- 312 0     0      
contig06382 ubiquitination factor ufd2 homolog ( cerevisiae) 526 20 3.29E-92 92.10% 9 C:cytoplasm; P:protein folding; P:apoptosis; F:ubiquitin-protein ligase activity; F:unfolded protein binding; F:enzyme binding; P:protein ubiquitination during ubiquitin-dependent protein catabolic process; P:response to UV; C:ubiquitin ligase complex EC:6.3.2.19  
contig06383 ---NA--- 368 0     0      
contig06384 ---NA--- 268 0     0      
contig06385 ---NA--- 275 0     0      
contig06386 ---NA--- 255 0     0      
contig06387 ---NA--- 251 0     0      
contig06388 ---NA--- 252 0     0      
contig06389 ctr9 protein 293 20 1.42E-40 98.15% 4 P:somitogenesis; F:SH2 domain binding; P:pigmentation; P:neural crest cell development    
contig06390 ---NA--- 200 0     0      
contig06391 ---NA--- 261 0     0      
contig06392 pleckstrin homology domain family g (with ef domain) member 7 1903 20 0 68.55% 2 P:regulation of Rho protein signal transduction; F:Rho guanyl-nucleotide exchange factor activity    
contig06393 ---NA--- 243 0     0      
contig06394 ---NA--- 261 0     0      
contig06395 ---NA--- 394 0     0      
contig06396 ---NA--- 215 0     0      
contig06397 ---NA--- 255 0     0      
contig06398 formin homology 2 domain containing 1 283 20 6.87E-40 87.55% 5 C:cytoskeleton; C:cytoplasm; F:actin binding; P:actin cytoskeleton organization; C:nucleus    
contig06399 ribosomal rna processing 1 homolog b 247 8 2.32E-11 81.88% 2 C:preribosome, small subunit precursor; P:rRNA processing    
contig06400 mitochondrial ribosomal protein l43 394 20 1.17E-26 84.00% 1 C:mitochondrial large ribosomal subunit    
100 Rows returned.
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