Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 6101 - 6200:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig06101 ---NA--- 343 0     0      
contig06102 ---NA--- 307 0     0      
contig06103 basic leucine zipper and w2 domains 1 363 20 4.04E-48 95.25% 4 P:regulation of translational initiation; P:transcription antitermination; F:translation initiation factor activity; P:regulation of transcription, DNA-dependent    
contig06104 ae binding protein 2 543 20 2.75E-87 88.60% 5 F:DNA binding; F:transcription corepressor activity; C:nucleus; F:zinc ion binding; P:regulation of transcription, DNA-dependent    
contig06105 expressed sequence aw549877 518 19 1.52E-86 71.89% 0      
contig06106 tetraodon protein product cag00085 273 2 8.53E-22 66.50% 0      
contig06107 ---NA--- 420 0     0      
contig06108 nuclear rna export factor 1 250 20 8.47E-14 84.05% 7 C:nuclear pore; C:nuclear inclusion body; F:mRNA binding; F:nucleocytoplasmic transporter activity; F:protein binding; P:poly(A)+ mRNA export from nucleus; F:nucleotide binding    
contig06109 mon1 homolog b 399 20 6.12E-60 87.95% 0      
contig06110 ---NA--- 253 0     0      
contig06111 ---NA--- 293 0     0      
contig06112 adaptor-related protein complex mu 1 subunit 278 20 5.47E-45 99.80% 8 P:protein complex assembly; C:Golgi apparatus; C:lysosome; F:protein binding; P:protein targeting to lysosome; F:protein transporter activity; P:vesicle-mediated transport; C:clathrin adaptor complex    
contig06113 non-smc condensin i subunit h 269 20 6.16E-20 66.40% 2 P:mitosis; C:nucleus    
contig06114 subfamily member 6 247 20 4.35E-18 98.80% 6 C:cytoplasm; P:negative regulation of transcription, DNA-dependent; F:DNA binding; F:heat shock protein binding; C:nucleus; F:transcription repressor activity    
contig06115 ---NA--- 242 0     0      
contig06116 ---NA--- 269 0     0      
contig06117 ---NA--- 611 0     0      
contig06118 cellular apoptosis susceptibility protein 264 20 1.13E-05 99.75% 12 C:nuclear pore; P:protein transport; F:protein transporter activity; C:nucleus; P:transport; P:apoptosis; P:protein import into nucleus, docking; C:cytoplasm; P:intracellular protein transport; F:importin-alpha export receptor activity; F:binding; P:cell proliferation    
contig06119 ---NA--- 211 0     0      
contig06120 #NAME? 495 20 8.49E-25 85.10% 4 P:metabolic process; F:2,4-dienoyl-CoA reductase (NADPH) activity; C:mitochondrion; F:binding EC:1.3.1.34  
contig06121 rna terminal phosphate cyclase domain 1 327 20 8.90E-11 80.15% 6 F:RNA-3'-phosphate cyclase activity; F:ligase activity, forming phosphoric ester bonds; F:ligase activity; F:catalytic activity; P:RNA processing; C:nucleus    
contig06122 ---NA--- 193 0     0      
contig06123 ---NA--- 257 0     0      
contig06124 voltage-dependent anion channel 3 262 20 4.76E-12 89.55% 4 P:anion transport; F:voltage-gated anion channel activity; C:membrane attack complex; C:mitochondrial outer membrane    
contig06125 ---NA--- 244 0     0      
contig06126 hyaluronan mediated motility receptor 547 19 4.41E-16 78.21% 3 F:hyaluronic acid binding; P:cytoskeleton organization; P:cell-cell signaling    
contig06127 ---NA--- 268 0     0      
contig06128 ---NA--- 362 0     0      
contig06129 amine oxidase (flavin containing) domain 2 999 20 2.17E-147 96.35% 11 P:chromatin modification; P:pituitary gland development; P:positive regulation of hormone biosynthetic process; P:positive regulation of transcription from RNA polymerase II promoter; C:transcription factor complex; P:negative regulation of transcription from RNA polymerase II promoter; F:oxidoreductase activity; F:transcription factor activity; F:transcription factor binding; P:cell proliferation; P:in utero embryonic development    
contig06130 mgc108224 protein 366 20 8.42E-30 65.45% 1 F:transferase activity    
contig06131 unnamed protein product [Tetraodon nigroviridis] 300 1 5.56E-13 60.00% 0      
contig06132 ---NA--- 258 0     0      
contig06133 ---NA--- 249 0     0      
contig06134 ---NA--- 549 0     0      
contig06135 x-ray repair complementing defective repair in chinese hamster cells 1 326 20 4.88E-25 95.35% 5 P:single strand break repair; P:base-excision repair; C:nucleus; F:damaged DNA binding; F:protein binding    
contig06136 chromosome 14 open reading frame 169 483 20 1.48E-29 70.75% 5 P:ribosome biogenesis; F:RNA binding; P:transcription; P:chromatin remodeling; C:nucleolar preribosome    
contig06137 ---NA--- 255 0     0      
contig06138 ctage member 5 244 20 1.09E-21 82.00% 2 F:protein binding; F:enzyme activator activity    
contig06139 poly binding nuclear 1 344 20 1.39E-27 72.40% 7 C:cytoplasm; P:mRNA polyadenylation; P:muscle contraction; F:protein binding; F:poly(A) RNA binding; C:nucleus; F:nucleotide binding    
contig06140 k0841 protein 209 2 5.19E-11 71.00% 2 F:F; C:C    
contig06141 e3 ubiquitin-protein ligase march3 391 1 1.19E-07 57.00% 0      
contig06142 ---NA--- 258 0     0      
contig06143 ---NA--- 249 0     0      
contig06144 ---NA--- 108 0     0      
contig06145 endonuclease g 260 20 1.09E-32 89.00% 6 C:extracellular space; F:endonuclease activity; F:manganese ion binding; F:nucleic acid binding; F:magnesium ion binding; C:mitochondrion    
contig06146 ---NA--- 240 0     0      
contig06147 ---NA--- 265 0     0      
contig06148 ---NA--- 252 0     0      
contig06149 unnamed protein product [Tetraodon nigroviridis] 279 1 1.31E-22 71.00% 0      
contig06150 apolipoprotein o 540 20 8.83E-22 76.95% 1 C:membrane    
contig06151 ---NA--- 274 0     0      
contig06152 novel protein 331 20 4.37E-34 67.65% 0      
contig06153 ---NA--- 204 0     0      
contig06154 ---NA--- 311 0     0      
contig06155 ubiquinol-cytochrome c reductase core protein ii 258 2 9.65E-05 79.00% 4 F:metal ion binding; F:catalytic activity; F:metalloendopeptidase activity; F:zinc ion binding    
contig06156 ---NA--- 329 0     0      
contig06157 ---NA--- 311 0     0      
contig06158 interleukin enhancer binding factor 2 266 20 2.11E-44 98.10% 10 C:nucleolus; P:immune response; F:DNA binding; F:double-stranded RNA binding; F:ATP binding; F:transferase activity; F:protein binding; P:transcription antitermination; P:positive regulation of transcription, DNA-dependent; F:RNA polymerase II transcription factor activity    
contig06159 ---NA--- 212 0     0      
contig06160 ---NA--- 275 0     0      
contig06161 sorting nexin 14 256 20 1.75E-30 84.75% 7 F:phosphoinositide binding; F:signal transducer activity; ; F:protein binding; F:protein transporter activity; P:intracellular protein transport; C:integral to membrane    
contig06162 ---NA--- 414 0     0      
contig06163 pyruvate dehydrogenase phosphatase isoenzyme 2 666 20 1.69E-49 77.55% 9 C:protein serine/threonine phosphatase complex; F:[pyruvate dehydrogenase (lipoamide)] phosphatase activity; F:protein complex binding; C:mitochondrial matrix; P:protein amino acid dephosphorylation; F:calcium ion binding; F:magnesium-dependent protein serine/threonine phosphatase activity; F:magnesium ion binding; P:positive regulation of catalytic activity EC:3.1.3.43  
contig06164 cxxc finger 1 (phd domain) 506 20 3.69E-63 76.85% 10 C:nuclear matrix; F:zinc ion binding; P:zinc ion transport; P:hemopoiesis; P:regulation of transcription, DNA-dependent; F:unmethylated CpG binding; F:transcription activator activity; F:protein binding; P:DNA methylation on cytosine; P:blood vessel development    
contig06165 hcls1 associated x-1 240 20 2.66E-23 73.05% 5 C:microsome; F:protein binding; C:clathrin-coated vesicle; P:cell surface receptor linked signaling pathway; C:mitochondrion    
contig06166 ---NA--- 301 0     0      
contig06167 occludin a 254 4 7.44E-05 86.00% 0      
contig06168 ---NA--- 244 0     0      
contig06169 zinc finger (ccch type) rna binding motif and serine arginine rich 2 243 20 2.23E-38 85.10% 5 C:nucleolus; F:RNA binding; C:ribonucleoprotein complex; F:nucleotide binding; F:zinc ion binding    
contig06170 ---NA--- 281 0     0      
contig06171 musashi homolog 2 368 20 5.83E-39 83.80% 4 C:cytoplasm; F:poly(U) RNA binding; C:polysome; F:nucleotide binding    
contig06172 ---NA--- 355 0     0      
contig06173 ---NA--- 169 0     0      
contig06174 ---NA--- 291 0     0      
contig06175 ---NA--- 385 0     0      
contig06176 ---NA--- 268 0     0      
contig06177 ---NA--- 327 0     0      
contig06178 ---NA--- 270 0     0      
contig06179 sumo-conjugating enzyme ubc9 496 20 1.19E-26 98.20% 0      
contig06180 ---NA--- 426 0     0      
contig06181 ---NA--- 276 0     0      
contig06182 anaphase promoting complex subunit 2 493 20 3.00E-75 74.60% 6 P:mitotic cell cycle; P:cyclin catabolic process; C:extracellular space; F:ubiquitin-protein ligase activity; P:cell cycle phase; P:regulation of cyclin-dependent protein kinase activity EC:6.3.2.19  
contig06183 cytochrome c oxidase subunit i 341 20 3.78E-38 93.55% 9 P:aerobic respiration; F:copper ion binding; F:iron ion binding; F:heme binding; P:electron transport; P:transport; C:integral to membrane; F:cytochrome-c oxidase activity; C:mitochondrial respiratory chain EC:1.9.3.1  
contig06184 ccr4-not transcription subunit 10 315 20 1.86E-48 93.25% 1 F:binding    
contig06185 novel protein (zgc:63624) 244 2 1.97E-10 76.00% 0      
contig06186 ---NA--- 172 0     0      
contig06187 ---NA--- 151 0     0      
contig06188 pq loop repeat containing 2 240 20 1.67E-17 76.95% 1 C:membrane    
contig06189 ---NA--- 426 0     0      
contig06190 ---NA--- 243 0     0      
contig06191 gemin 4 415 20 7.62E-39 53.15% 11 P:mRNA processing; C:small nuclear ribonucleoprotein complex; C:nucleus; P:RNA splicing; P:rRNA processing; C:cytoplasm; F:F; C:spliceosomal complex; C:nucleolus; F:protein binding; P:P    
contig06192 ubiquinol-cytochrome c reductase core protein ii 246 20 1.40E-32 83.85% 3 F:metalloendopeptidase activity; P:proteolysis; F:zinc ion binding EC:3.4.24.0  
contig06193 ---NA--- 241 0     0      
contig06194 ---NA--- 391 0     0      
contig06195 riken cdna 2310011j03 698 18 4.01E-20 69.72% 1 F:protein binding    
contig06196 mothers against decapentaplegic homolog 7 282 20 5.66E-18 94.25% 10 P:regulation of transcription, DNA-dependent; C:transcription factor complex; P:regulation of transforming growth factor beta receptor signaling pathway; F:protein binding; F:transcription factor activity; P:common-partner SMAD protein phosphorylation; P:transcription antitermination; P:negative regulation of transcription; ; C:cytoplasm    
contig06197 ---NA--- 317 0     0      
contig06198 ---NA--- 245 0     0      
contig06199 member of ras oncogene family-like 4 504 20 8.01E-34 71.05% 1 F:nucleotide binding    
contig06200 ectonucleoside triphosphate diphosphohydrolase 4 506 20 6.16E-18 67.35% 3 F:uridine-diphosphatase activity; C:integral to Golgi membrane; P:UDP catabolic process    
100 Rows returned.
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