Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 6001 - 6100:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig06001 melanoma associated antigen 1-like 1 554 20 4.62E-13 71.30% 0      
contig06002 mannose-6-phosphate cation dependent 247 20 1.22E-28 81.70% 11 C:lysosomal membrane; C:integral to membrane; F:mannose binding; F:receptor activity; C:cell surface; C:late endosome; C:trans-Golgi network; F:protein domain specific binding; P:mannose transport; P:protein targeting to lysosome; F:mannose transmembrane transporter activity    
contig06003 ---NA--- 624 0     0      
contig06004 ---NA--- 254 0     0      
contig06005 tubulin-specific chaperone c 429 20 4.53E-31 80.40% 4 P:post-chaperonin tubulin folding pathway; F:chaperone binding; C:microtubule;    
contig06006 ---NA--- 460 0     0      
contig06007 ---NA--- 240 0     0      
contig06008 ---NA--- 245 0     0      
contig06009 tp53 regulating kinase 306 20 4.66E-28 79.85% 6 P:protein amino acid phosphorylation; F:p53 binding; F:ATP binding; F:protein tyrosine kinase activity; C:nucleus; F:protein serine/threonine kinase activity EC:2.7.10.0; EC:2.7.11.0  
contig06010 glutathione s-transferase theta-1 516 20 4.66E-27 84.70% 1 C:C    
contig06011 nuclear transcription x-box binding 1 512 20 1.91E-78 75.00% 7 F:zinc ion binding; P:inflammatory response; P:negative regulation of transcription from RNA polymerase II promoter; F:protein binding; F:transcription factor activity; P:negative regulation of MHC class II biosynthetic process; C:nucleus    
contig06012 ---NA--- 258 0     0      
contig06013 ring finger protein 17 331 20 7.47E-26 68.65% 3 C:cytoplasm; F:protein homodimerization activity; P:spermatid development    
contig06014 rad50 interactor 1 258 20 2.45E-08 69.75% 1 P:transport    
contig06015 ---NA--- 242 0     0      
contig06016 solute carrier family 30 (zinc transporter) member 2 608 20 2.04E-53 85.10% 7 C:cytoplasmic membrane-bounded vesicle; C:plasma membrane; P:zinc ion transport; F:cation transmembrane transporter activity; C:integral to membrane; F:zinc ion binding; C:endosome membrane    
contig06017 unnamed protein product [Tetraodon nigroviridis] 255 1 3.00E-14 83.00% 0      
contig06018 sestrin 1 245 20 6.94E-32 98.20% 3 C:nucleus; P:cell cycle arrest; P:determination of left/right symmetry    
contig06019 f-box protein 30 235 20 5.74E-34 82.20% 1 F:zinc ion binding    
contig06020 ---NA--- 282 0     0      
contig06021 carboxy-terminal domain rna polymerase ii polypeptide a small phosphatase 2 521 2 1.48E-20 86.00% 0      
contig06022 coiled-coil domain containing 44 252 19 1.04E-14 79.42% 5 F:integrase activity; C:mitochondrion; F:DNA binding; F:zinc ion binding; P:DNA integration    
contig06023 ---NA--- 465 0     0      
contig06024 phosphoglucomutase 1 252 20 2.99E-38 92.05% 4 C:cytoplasm; P:cellular calcium ion homeostasis; P:glucose metabolic process; F:phosphoglucomutase activity EC:5.4.2.2  
contig06025 unnamed protein product [Tetraodon nigroviridis] 453 1 5.55E-13 75.00% 0      
contig06026 cdc23 (cell division cycle homolog) 350 20 2.59E-42 93.60% 10 P:ubiquitin-dependent protein catabolic process; F:binding; P:mitotic metaphase plate congression; P:cell division; F:ubiquitin-protein ligase activity; P:G1 phase of mitotic cell cycle; P:ubiquitin cycle; P:regulation of exit from mitosis; P:regulation of mitotic metaphase/anaphase transition; C:anaphase-promoting complex EC:6.3.2.19  
contig06027 ---NA--- 264 0     0      
contig06028 ---NA--- 282 0     0      
contig06029 ---NA--- 247 0     0      
contig06030 ---NA--- 270 0     0      
contig06031 mgc52838 protein 232 8 2.60E-18 70.13% 0      
contig06032 ---NA--- 281 0     0      
contig06033 ---NA--- 253 0     0      
contig06034 sfi1 spindle assembly associated 228 20 2.00E-10 62.00% 0      
contig06035 myeloid leukemia factor 2 426 20 2.49E-45 88.10% 4 P:defense response; C:cytoplasm; C:nucleus; F:protein binding    
contig06036 proline rich gla (g-carboxyglutamic acid) 4 397 20 4.73E-44 55.70% 2 C:extracellular region; F:binding    
contig06037 ---NA--- 261 0     0      
contig06038 dead (asp-glu-ala-asp) box polypeptide 41 549 20 2.32E-97 98.10% 10 P:RNA splicing; P:apoptosis; F:ATP-dependent helicase activity; C:spliceosomal complex; F:RNA binding; F:protein binding; P:multicellular organismal development; P:mRNA processing; F:ATP binding; F:zinc ion binding    
contig06039 ---NA--- 260 0     0      
contig06040 extracellular matrix protein 1 precursor 320 2 7.62E-10 67.00% 0      
contig06041 coiled-coil domain containing 84 250 11 3.56E-12 66.18% 2 F:F; C:C    
contig06042 ---NA--- 251 0     0      
contig06043 ---NA--- 240 0     0      
contig06044 ---NA--- 258 0     0      
contig06045 ---NA--- 235 0     0      
contig06046 ---NA--- 147 0     0      
contig06047 ---NA--- 160 0     0      
contig06048 ---NA--- 407 0     0      
contig06049 ---NA--- 249 0     0      
contig06050 ---NA--- 262 0     0      
contig06051 ---NA--- 304 0     0      
contig06052 unc-50 homolog 244 20 2.24E-22 96.45% 6 C:Golgi membrane; F:RNA binding; C:membrane attack complex; P:cell surface receptor linked signaling pathway; C:nuclear inner membrane; P:protein transport    
contig06053 ---NA--- 194 0     0      
contig06054 unnamed protein product [Tetraodon nigroviridis] 245 1 6.13E-04 83.00% 0      
contig06055 gle1 rna export mediator homolog 194 20 3.64E-20 84.70% 4 C:cytoplasm; C:nuclear pore; P:intracellular protein transmembrane transport; P:poly(A)+ mRNA export from nucleus    
contig06056 ---NA--- 261 0     0      
contig06057 unnamed protein product [Tetraodon nigroviridis] 303 1 5.73E-18 77.00% 0      
contig06058 foie gras 499 20 6.66E-25 79.35% 0      
contig06059 activating transcription factor 4 596 20 4.95E-17 80.95% 15 F:GABA receptor binding; P:positive regulation of transcription from RNA polymerase II promoter; C:transcription factor complex; F:protein C-terminus binding; F:sequence-specific DNA binding; C:membrane attack complex; F:transcription activator activity; F:protein dimerization activity; F:transcription factor activity; P:transcription antitermination; P:gluconeogenesis; F:specific RNA polymerase II transcription factor activity; C:cytoplasm; P:response to stress; C:plasma membrane    
contig06060 unnamed protein product [Tetraodon nigroviridis] 309 1 3.23E-13 81.00% 0      
contig06061 ---NA--- 266 0     0      
contig06062 ---NA--- 160 0     0      
contig06063 ubiquitin specific peptidase 36 244 20 4.07E-32 99.90% 6 P:ubiquitin-dependent protein catabolic process; F:ubiquitin thiolesterase activity; P:ubiquitin cycle; F:cysteine-type endopeptidase activity; F:endopeptidase inhibitor activity; C:nucleus EC:3.1.2.15; EC:3.4.22.0  
contig06064 zinc finger protein 364 249 20 1.04E-29 84.05% 3 P:zinc ion transport; F:zinc ion binding; F:protein binding    
contig06065 atp binding domain 1 member b 420 20 5.79E-34 83.40% 1 F:ATP binding    
contig06066 ---NA--- 250 0     0      
contig06067 receptor expression-enhancing protein 5 251 20 2.37E-32 89.05% 2 F:protein binding; C:integral to membrane    
contig06068 ---NA--- 132 0     0      
contig06069 ---NA--- 302 0     0      
contig06070 von willebrand factor a domain containing 1 260 20 7.33E-29 59.15% 3 C:collagen type XII; C:proteinaceous extracellular matrix; C:extracellular region    
contig06071 dual specificity phosphatase 1 283 20 1.94E-26 83.90% 5 F:protein tyrosine phosphatase activity; F:kinase activity; P:protein amino acid dephosphorylation; F:MAP kinase tyrosine/serine/threonine phosphatase activity; C:nucleus EC:3.1.3.48  
contig06072 chromosome 22 open reading frame 28 709 20 3.26E-65 98.15% 2 F:F; C:C    
contig06073 ---NA--- 609 0     0      
contig06074 ---NA--- 431 0     0      
contig06075 ---NA--- 477 0     0      
contig06076 ---NA--- 474 0     0      
contig06077 ---NA--- 278 0     0      
contig06078 ---NA--- 261 0     0      
contig06079 ---NA--- 259 0     0      
contig06080 protein kinase eta 726 20 1.03E-93 84.10% 6 P:protein amino acid phosphorylation; ; F:protein kinase C activity; F:diacylglycerol binding; F:ATP binding; F:zinc ion binding EC:2.7.11.13  
contig06081 ---NA--- 266 0     0      
contig06082 ---NA--- 239 0     0      
contig06083 ---NA--- 475 0     0      
contig06084 cell death regulator aven 670 1 8.30E-04 65.00% 0      
contig06085 ---NA--- 254 0     0      
contig06086 cxxc finger 1 (phd domain) 790 20 3.29E-65 96.10% 11 C:nuclear matrix; F:zinc ion binding; P:zinc ion transport; P:hemopoiesis; P:regulation of transcription, DNA-dependent; C:nuclear speck; F:unmethylated CpG binding; F:transcription activator activity; F:protein binding; P:DNA methylation on cytosine; P:blood vessel development    
contig06087 ---NA--- 175 0     0      
contig06088 bromodomain adjacent to zinc finger 2b 257 20 1.82E-11 75.65% 2 F:metal ion binding; P:transcription    
contig06089 ---NA--- 260 0     0      
contig06090 ---NA--- 271 0     0      
contig06091 ---NA--- 305 0     0      
contig06092 ---NA--- 286 0     0      
contig06093 ---NA--- 279 0     0      
contig06094 metalloprotease c21orf57 507 20 4.45E-72 74.50% 2 F:metal ion binding; F:peptidase activity    
contig06095 ---NA--- 257 0     0      
contig06096 unnamed protein product [Tetraodon nigroviridis] 241 2 1.01E-06 82.00% 0      
contig06097 ---NA--- 438 0     0      
contig06098 ---NA--- 242 0     0      
contig06099 spectrin sh3 domain binding protein 1 562 20 6.97E-44 94.00% 0      
contig06100 ---NA--- 254 0     0      
100 Rows returned.
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