Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 501 - 600:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig00501 small subunit processome component 1552 20 3.81E-159 78.25% 3 C:small nucleolar ribonucleoprotein complex; F:protein binding; P:rRNA processing    
contig00502 ornithine decarboxylase antizyme 1246 20 3.17E-72 79.95% 3 P:polyamine biosynthetic process; F:ornithine decarboxylase inhibitor activity; F:protein binding    
contig00503 eukaryotic translation initiation factor 4e binding protein 1 960 20 4.66E-43 75.30% 6 F:translation repressor activity; P:insulin receptor signaling pathway; P:negative regulation of protein complex assembly; P:negative regulation of translational initiation; C:cytoplasm; F:eukaryotic initiation factor 4E binding    
contig00504 interleukin enhancer-binding factor 3 homolog 589 20 9.48E-90 89.35% 9 F:transcription repressor activity; F:double-stranded RNA binding; F:transcription activator activity; F:protein binding; F:transcription factor activity; P:transcription antitermination; P:negative regulation of transcription, DNA-dependent; P:positive regulation of transcription, DNA-dependent; C:nucleus    
contig00505 interleukin enhancer-binding factor 3 homolog 214 15 3.45E-07 85.67% 9 C:nucleus; F:DNA binding; F:double-stranded RNA binding; F:RNA binding; P:regulation of transcription, DNA-dependent; C:intracellular; P:transcription termination; P:transcription antitermination; P:transcription    
contig00506 zinc finger protein 135 477 20 1.52E-95 55.15% 1 F:binding    
contig00507 survival motor neuron domain containing 1 1013 20 3.38E-111 87.25% 7 P:induction of apoptosis; P:spliceosome assembly; C:nuclear speck; F:protein binding; C:spliceosomal complex; ; C:cytoplasm    
contig00508 macrophage migration inhibitory factor 663 20 1.15E-50 90.70% 9 P:prostaglandin biosynthetic process; P:inflammatory response; P:cell surface receptor linked signaling pathway; F:cytokine activity; C:extracellular space; F:phenylpyruvate tautomerase activity; P:cell proliferation; P:negative regulation of apoptosis; C:cytoplasm EC:5.3.2.1  
contig00509 ---NA--- 265 0     0      
contig00510 hypothetical protein Kpol_464p3 [Vanderwaltozyma polyspora DSM 70294] 559 1 2.38E-04 62.00% 0      
contig00511 proteasome ( macropain) 26s non- 14 960 20 5.70E-150 91.55% 5 F:endopeptidase activity; F:protein binding; P:ubiquitin-dependent protein catabolic process; C:proteasome complex; C:cytosol    
contig00512 ---NA--- 126 0     0      
contig00513 ---NA--- 252 0     0      
contig00514 ---NA--- 1224 0     0      
contig00515 integrator complex subunit 12 393 20 1.94E-21 82.95% 5 F:protein binding; P:zinc ion transport; P:snRNA processing; F:zinc ion binding; C:integrator complex    
contig00516 family with sequence similarity member a 329 20 9.72E-50 84.10% 1 F:F    
contig00517 ---NA--- 450 0     0      
contig00518 f11 receptor 1211 20 6.02E-36 62.00% 3 P:cellular process; C:cell junction; F:protein binding    
contig00519 ---NA--- 161 0     0      
contig00520 elac homolog 2 736 20 1.14E-71 79.55% 5 F:endonuclease activity; F:protein binding; C:nucleus; F:zinc ion binding; P:tRNA processing    
contig00521 PREDICTED: hypothetical protein [Danio rerio] 1754 1 3.19E-10 58.00% 0      
contig00522 calcyclin binding protein 1560 20 7.58E-77 78.80% 3 C:cytoplasm; C:nuclear envelope lumen; P:ubiquitin cycle    
contig00523 mucolipin 2 1751 20 2.84E-176 79.05% 7 C:cytoplasm; C:plasma membrane; P:cation transport; C:integral to membrane; F:cation channel activity; P:locomotory behavior; P:auditory receptor cell differentiation    
contig00524 ---NA--- 784 0     0      
contig00525 coiled-coil domain containing 16 1375 20 2.07E-51 78.60% 2 P:cell cycle; P:multicellular organismal development    
contig00526 ---NA--- 418 0     0      
contig00527 ribosomal protein l8 823 20 1.67E-141 99.05% 4 F:structural constituent of ribosome; C:cytosolic large ribosomal subunit; P:translation; F:rRNA binding EC:3.6.5.3  
contig00528 pescadillo homolog containing brct domain 1395 20 1.34E-130 81.60% 5 C:nucleolus; P:cell proliferation; P:nucleolus organization; P:mitotic metaphase; C:condensed chromosome    
contig00529 h+ lysosomal v0 subunit d1 894 20 7.41E-109 96.70% 5 P:proton transport; F:proton-transporting ATPase activity, rotational mechanism; C:vacuolar proton-transporting V-type ATPase complex; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; F:hydrogen ion transporting ATP synthase activity, rotational mechanism EC:3.6.3.14; EC:3.6.3.6  
contig00530 ---NA--- 311 0     0      
contig00531 ---NA--- 211 0     0      
contig00532 disrupter of silencing 10 2016 20 1.68E-120 73.60% 4 C:nucleolus; P:organelle organization; F:protein binding; P:brain development    
contig00533 ---NA--- 171 0     0      
contig00534 syntaxin 2 1727 20 1.43E-63 71.10% 12 P:cytokinesis; C:soluble fraction; P:embryo implantation; C:integral to membrane; P:acrosome reaction; P:organ morphogenesis; C:microsome; P:cell differentiation; F:calcium-dependent protein binding; P:signal transduction; P:ectoderm development; C:basolateral plasma membrane    
contig00535 chromosome 9 open reading frame 64 511 20 1.10E-25 72.80% 2 F:F; C:C    
contig00536 eukaryotic translation initiation factor 4e binding protein 1 250 20 2.38E-16 78.35% 6 C:cytoplasm; P:negative regulation of translational initiation; F:translation initiation factor activity; F:eukaryotic initiation factor 4E binding; F:translation repressor activity; P:insulin receptor signaling pathway    
contig00537 karyopherin alpha 2 (rag cohort importin alpha 1) 1812 20 0 85.95% 6 F:protein transporter activity; P:regulation of transcription by glucose; P:protein import into nucleus; C:nuclear pore; F:protein binding; C:cytoplasm    
contig00538 ---NA--- 791 0     0      
contig00539 zinc finger protein 143 256 20 6.67E-22 63.95% 3 F:zinc ion binding; F:nucleic acid binding; C:intracellular    
contig00540 ---NA--- 470 0     0      
contig00541 ---NA--- 281 0     0      
contig00542 ---NA--- 251 0     0      
contig00543 small nuclear rna activating polypeptide 43kda 1286 20 1.22E-88 58.30% 1 P:transcription    
contig00544 ly1 antibody reactive homolog 1389 20 5.89E-70 64.15% 2 C:nucleolus; F:protein binding    
contig00545 ---NA--- 364 0     0      
contig00546 dead (asp-glu-ala-asp) box polypeptide 47 816 20 3.81E-122 96.00% 6 C:cytoplasm; C:nucleolus; F:ATP-dependent RNA helicase activity; F:RNA binding; F:ATP binding; P:RNA metabolic process    
contig00547 ---NA--- 305 0     0      
contig00548 coatomer protein subunit zeta 1 894 20 1.96E-93 98.40% 9 C:COPI vesicle coat; F:protein transporter activity; C:clathrin vesicle coat; C:Golgi membrane; P:retrograde vesicle-mediated transport, Golgi to ER; P:intra-Golgi vesicle-mediated transport; P:protein complex assembly; F:protein binding; P:intracellular protein transport    
contig00549 bud31 homolog 1057 20 1.41E-83 98.35% 5 P:regulation of transcription from RNA polymerase II promoter; P:multicellular organismal development; F:transcription factor activity; C:nucleus; F:zinc ion binding    
contig00550 ---NA--- 223 0     0      
contig00551 domain containing 1 354 20 1.11E-45 84.35% 1 P:immune response    
contig00552 family with sequence similarity member a 2107 20 2.71E-99 75.70% 1 F:protein binding    
contig00553 arp6 actin-related protein 6 homolog 246 20 1.88E-29 96.55% 8 C:cytoskeleton; C:membrane; C:cytoplasm; F:receptor activity; F:structural molecule activity; F:protein binding; P:transport; F:transporter activity    
contig00554 atp h+ mitochondrial f1 beta polypeptide 687 20 3.86E-92 97.50% 9 F:hydrogen-exporting ATPase activity, phosphorylative mechanism; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; C:integral to membrane; P:ATP synthesis coupled proton transport; F:metal ion binding; F:ATP binding; F:protein binding; C:mitochondrial proton-transporting ATP synthase, catalytic core; F:proton-transporting ATPase activity, rotational mechanism EC:3.6.3.6; EC:3.6.3.14  
contig00555 atp synthase beta subunit 1035 20 2.21E-136 90.90% 11 C:proton-transporting ATP synthase complex, catalytic core F(1); F:lipoprotein receptor activity; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; C:integral to membrane; C:mitochondrial inner membrane; P:ATP synthesis coupled proton transport; F:metal ion binding; F:ATP binding; P:receptor-mediated endocytosis; F:proton-transporting ATPase activity, rotational mechanism EC:3.6.3.6; EC:3.6.3.14  
contig00556 tetraspanin 7 452 20 4.24E-29 59.80% 2 C:integral to membrane; C:plasma membrane    
contig00557 ---NA--- 765 0     0      
contig00558 glyceraldehyde-3-phosphate dehydrogenase 1397 20 7.18E-100 96.35% 4 C:cytoplasm; F:NAD or NADH binding; P:glycolysis; F:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity EC:1.2.1.12  
contig00559 ---NA--- 477 0     0      
contig00560 egg envelope component zpc 2002 20 3.13E-73 49.05% 0      
contig00561 ---NA--- 248 0     0      
contig00562 novel protein 967 20 5.97E-30 77.00% 2 F:F; C:C    
contig00563 high density lipoprotein-binding protein 879 20 3.05E-67 95.25% 9 C:cytoplasm; F:lipid transporter activity; F:lipid binding; C:plasma membrane; F:RNA binding; F:protein binding; P:lipid transport; P:cholesterol metabolic process; C:nucleus    
contig00564 mad2l1 binding protein 572 20 9.84E-57 66.95% 5 C:cytoplasm; P:mitotic cell cycle; F:protein binding; P:regulation of cell cycle; C:nucleus    
contig00565 ---NA--- 257 0     0      
contig00566 ---NA--- 847 0     0      
contig00567 ---NA--- 283 0     0      
contig00568 ---NA--- 130 0     0      
contig00569 cytochrome c oxidase subunit vic 409 20 3.82E-30 81.90% 4 C:mitochondrial inner membrane; P:electron transport; C:integral to membrane; F:cytochrome-c oxidase activity EC:1.9.3.1  
contig00570 ---NA--- 805 0     0      
contig00571 at rich interactive domain 3a (bright-like) 544 20 5.05E-57 66.20% 4 F:transcription factor activity; C:nucleus; F:protein homodimerization activity; P:regulation of transcription, DNA-dependent    
contig00572 at rich interactive domain 3b (bright-like) 218 20 1.18E-15 67.40% 2 F:DNA binding; C:intracellular    
contig00573 ---NA--- 387 0     0      
contig00574 eh domain-containing protein 3 1373 20 2.95E-90 65.40% 0      
contig00575 ---NA--- 269 0     0      
contig00576 ---NA--- 408 0     0      
contig00577 family with sequence similarity member a1 296 20 5.60E-13 79.75% 0      
contig00578 y box protein 2 1031 20 5.15E-67 75.50% 10 F:mRNA binding; P:negative regulation of translation; P:regulation of transcription, DNA-dependent; F:lipid binding; P:spermatid development; F:DNA binding; F:translation regulator activity; C:ribonucleoprotein complex; P:oogenesis; C:cytoplasm    
contig00579 ---NA--- 327 0     0      
contig00580 ---NA--- 668 0     0      
contig00581 poly -specific ribonuclease (deadenylation nuclease) 2681 20 0 83.75% 11 C:cytoplasm; F:poly(A)-specific ribonuclease activity; P:female gamete generation; F:mRNA 3'-UTR binding; P:meiosis; F:protein binding; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; F:magnesium ion binding; C:nucleus; P:RNA modification; F:nucleotide binding EC:3.1.13.4  
contig00582 apoptosis- taf9-like domain 1 826 20 1.20E-46 76.75% 12 C:soluble fraction; C:microsome; C:intracellular organelle part; P:D-gluconate metabolic process; F:carboxylic acid binding; P:pentose-phosphate shunt, oxidative branch; F:protein binding; F:phosphogluconate dehydrogenase (decarboxylating) activity; F:NADP or NADPH binding; C:chromosome; F:sugar binding; C:nucleus EC:1.1.1.44  
contig00583 leucine rich repeat containing 31 1321 20 7.84E-40 56.95% 1 F:protein binding    
contig00584 c12orf62 homolog 403 20 2.34E-19 78.40% 1 C:membrane    
contig00585 solute carrier family member 1a 2129 20 4.35E-97 76.60% 3 P:transport; F:secondary active transmembrane transporter activity; C:integral to membrane    
contig00586 ---NA--- 117 0     0      
contig00587 aconitase mitochondrial 445 20 1.19E-71 98.95% 6 P:citrate metabolic process; F:iron ion binding; P:tricarboxylic acid cycle; F:4 iron, 4 sulfur cluster binding; F:aconitate hydratase activity; C:mitochondrion EC:4.2.1.3  
contig00588 ---NA--- 166 0     0      
contig00589 ---NA--- 162 0     0      
contig00590 coenzyme q6 homolog 475 20 1.35E-59 87.15% 7 F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; C:extracellular space; P:electron transport; P:cellular aromatic compound metabolic process; P:ubiquinone biosynthetic process; F:FAD binding; C:mitochondrion EC:1.14.13.0  
contig00591 nucleolin 1110 20 3.13E-20 97.60% 7 C:nucleolus; P:angiogenesis; F:DNA binding; F:RNA binding; C:cell cortex; F:protein C-terminus binding; F:nucleotide binding    
contig00592 novel protein 784 2 2.61E-39 70.00% 0      
contig00593 gpn-loop gtpase 2 1037 20 9.74E-90 91.50% 1 F:ATP binding    
contig00594 rna terminal phosphate cyclase-like 1 1198 20 0 90.20% 3 C:nucleolus; P:rRNA processing; F:RNA-3'-phosphate cyclase activity EC:6.5.1.4  
contig00595 ---NA--- 533 0     0      
contig00596 ---NA--- 162 0     0      
contig00597 ---NA--- 311 0     0      
contig00598 ---NA--- 695 0     0      
contig00599 extracellular matrix protein 1 968 20 2.41E-47 53.80% 1 C:extracellular region part    
contig00600 af206632_1ring-infested erythrocyte surface antigen 996 1 1.19E-04 51.00% 0      
100 Rows returned.
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