Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 5801 - 5900:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig05801 dkfzp459p083 protein isoform 2 415 20 9.01E-40 91.90% 2 F:F; C:C    
contig05802 PREDICTED: hypothetical protein isoform 2 [Danio rerio] 251 1 3.33E-10 83.00% 0      
contig05803 ---NA--- 333 0     0      
contig05804 ---NA--- 290 0     0      
contig05805 c10orf104 homolog 639 20 4.99E-40 96.05% 2 P:P; C:C    
contig05806 ---NA--- 353 0     0      
contig05807 hmmr protein 367 7 3.55E-20 72.00% 0      
contig05808 ---NA--- 293 0     0      
contig05809 ---NA--- 254 0     0      
contig05810 otu domain containing 6b 434 20 5.88E-39 85.60% 2 P:P; C:C    
contig05811 ---NA--- 262 0     0      
contig05812 -like 2 ( coli) 285 20 2.21E-33 99.40% 17 P:chromatin modification; C:cytosol; C:nuclear matrix; F:damaged DNA binding; P:DNA recombination; P:DNA repair; F:ATP-dependent DNA helicase activity; P:protein folding; P:regulation of transcription, DNA-dependent; P:regulation of cell growth; F:identical protein binding; C:NuA4 histone acetyltransferase complex; F:ATP binding; P:transcription antitermination; F:unfolded protein binding; P:negative regulation of transcription; C:membrane    
contig05813 tsc22 domain family protein 2 (tsc22-related-inducible leucine zipper protein 4) 258 20 3.09E-17 95.50% 2 F:transcription factor activity; P:regulation of transcription, DNA-dependent    
contig05814 ---NA--- 276 0     0      
contig05815 lon peptidase mitochondrial 304 20 3.23E-37 99.50% 8 C:extracellular space; F:serine-type endopeptidase activity; F:DNA binding; P:ATP-dependent proteolysis; C:mitochondrial matrix; F:ATP binding; F:nucleoside-triphosphatase activity; F:ATP-dependent peptidase activity EC:3.4.21.0; EC:3.6.1.15  
contig05816 ---NA--- 610 0     0      
contig05817 phosphoribosyl pyrophosphate synthetase 1a 257 20 3.10E-19 97.60% 4 P:ribonucleoside monophosphate biosynthetic process; F:ribose phosphate diphosphokinase activity; F:magnesium ion binding; P:nucleoside metabolic process EC:2.7.6.1  
contig05818 protein tyrosine phosphatase-like a domain containing 1 385 20 4.19E-53 83.30% 4 P:JNK cascade; C:integral to membrane; P:I-kappaB kinase/NF-kappaB cascade; P:Rho protein signal transduction    
contig05819 ---NA--- 498 0     0      
contig05820 chromatin modifying protein 2a 265 20 2.27E-14 95.15% 5 F:protein domain specific binding; C:membrane attack complex; C:late endosome membrane; C:cytosol; P:protein transport    
contig05821 ---NA--- 253 0     0      
contig05822 ---NA--- 244 0     0      
contig05823 ---NA--- 255 0     0      
contig05824 ---NA--- 376 0     0      
contig05825 ---NA--- 250 0     0      
contig05826 ---NA--- 425 0     0      
contig05827 ---NA--- 272 0     0      
contig05828 ---NA--- 231 0     0      
contig05829 ---NA--- 260 0     0      
contig05830 ---NA--- 252 0     0      
contig05831 coiled-coil domain containing 98 278 20 2.02E-23 72.70% 1 F:protein binding    
contig05832 ---NA--- 484 0     0      
contig05833 ---NA--- 243 0     0      
contig05834 ---NA--- 246 0     0      
contig05835 downstream neighbor of son 314 17 3.80E-14 76.53% 4 F:F; P:multicellular organismal development; P:P; C:C    
contig05836 excision repair cross-complementing rodent repair deficiency complementation group 1 586 20 3.04E-48 94.05% 13 P:response to oxidative stress; F:damaged DNA binding; F:single-stranded DNA specific endodeoxyribonuclease activity; P:nucleotide-excision repair, DNA incision, 3'-to lesion; F:protein C-terminus binding; P:mitotic recombination; F:sequence-specific DNA binding; P:negative regulation of telomere maintenance; F:protein domain specific binding; C:nuclear chromosome, telomeric region; F:single-stranded DNA binding; P:nucleotide-excision repair, DNA incision, 5'-to lesion; C:nucleotide-excision repair complex    
contig05837 ---NA--- 198 0     0      
contig05838 ---NA--- 101 0     0      
contig05839 ---NA--- 294 0     0      
contig05840 ---NA--- 345 0     0      
contig05841 ---NA--- 278 0     0      
contig05842 transducer of 1 190 20 5.11E-14 86.65% 11 P:SMAD protein nuclear translocation; P:negative regulation of BMP signaling pathway; P:Wnt receptor signaling pathway through beta-catenin; F:SH3/SH2 adaptor activity; P:dorsal/ventral pattern formation; P:negative regulation of osteoblast differentiation; F:SMAD binding; P:negative regulation of cell proliferation; F:transcription corepressor activity; C:cytoplasm; C:nucleus    
contig05843 ---NA--- 393 0     0      
contig05844 ---NA--- 230 0     0      
contig05845 ---NA--- 258 0     0      
contig05846 bridging integrator 2 563 2 1.98E-06 58.50% 1 F:protein binding    
contig05847 uv excision repair protein rad23 homolog a 327 20 1.41E-24 91.50% 7 P:protein modification process; F:protein binding; F:single-stranded DNA binding; P:proteasomal ubiquitin-dependent protein catabolic process; F:damaged DNA binding; P:nucleotide-excision repair; C:nucleus    
contig05848 prp3 pre-mrna processing factor 3 homolog 401 20 1.24E-44 88.75% 7 P:response to stimulus; ; C:spliceosomal complex; F:protein binding; C:nuclear speck; P:visual perception; P:nuclear mRNA splicing, via spliceosome    
contig05849 wd repeat domain 12 718 20 2.28E-64 87.70% 3 P:Notch signaling pathway; C:nucleus; F:protein binding    
contig05850 ubiquitin-conjugating enzyme e2i 1593 20 1.12E-91 99.65% 16 P:ubiquitin-dependent protein catabolic process; F:HLH domain binding; P:protein sumoylation; C:dendrite; P:regulation of mitosis; F:protein C-terminus binding; C:synapse; P:regulation of protein metabolic process; P:chromosome segregation; C:synaptonemal complex; P:cell division; F:ubiquitin-protein ligase activity; C:PML body; P:ubiquitin cycle; F:SUMO ligase activity; P:multicellular organismal development EC:6.3.2.19  
contig05851 ---NA--- 259 0     0      
contig05852 maternal embryonic leucine zipper kinase 301 20 6.32E-33 90.50% 5 P:protein amino acid phosphorylation; F:ATP binding; P:erythrocyte development; F:protein serine/threonine kinase activity; P:regulation of heart contraction EC:2.7.11.0  
contig05853 hspc049 protein isoform 2 252 5 8.20E-12 55.60% 0      
contig05854 glutaminyl-trna synthetase 369 20 3.88E-46 92.75% 6 C:cytoplasm; F:glutamine-tRNA ligase activity; P:glutamyl-tRNA aminoacylation; P:glutaminyl-tRNA aminoacylation; F:protein binding; F:ATP binding EC:6.1.1.18  
contig05855 peptidylprolyl isomerase d 377 20 9.17E-48 81.25% 4 P:protein folding; F:isomerase activity; F:cyclosporin A binding; F:protein binding    
contig05856 chromosome 9 open reading frame 61 280 20 3.69E-09 86.40% 5 P:regulation of transcription, DNA-dependent; F:F; C:membrane; C:extracellular region; C:C    
contig05857 topoisomerase iii beta 278 20 2.09E-28 97.90% 7 P:chromosome segregation; F:DNA topoisomerase type I activity; P:DNA modification; F:protein binding; C:condensed chromosome; P:DNA unwinding involved in replication; P:DNA topological change EC:5.99.1.2  
contig05858 ---NA--- 281 0     0      
contig05859 ---NA--- 299 0     0      
contig05860 ---NA--- 306 0     0      
contig05861 chromosome 1 open reading frame 25 448 20 1.50E-58 80.55% 6 F:tRNA (guanine-N2-)-methyltransferase activity; C:intracellular; F:RNA binding; F:zinc ion binding; P:tRNA processing; P:behavior EC:2.1.1.32  
contig05862 general transcription factor polypeptide alpha 56kda 896 20 1.17E-45 68.30% 4 F:binding; F:RNA polymerase II transcription factor activity; P:transcription; C:transcription factor TFIIE complex    
contig05863 ---NA--- 249 0     0      
contig05864 catenin (cadherin-associated protein) delta 1 228 20 5.23E-35 90.00% 1 F:binding    
contig05865 ---NA--- 423 0     0      
contig05866 eukaryotic translation initiation factor 5a 425 20 3.97E-59 86.75% 12 F:translation initiation factor activity; P:viral genome replication; F:protein N-terminus binding; C:ribosome; P:positive regulation of translational initiation; P:induction of apoptosis; C:annulate lamellae; P:protein export from nucleus; C:nuclear pore; F:U6 snRNA binding; P:mRNA export from nucleus; P:cell proliferation    
contig05867 glutathione reductase 310 20 4.04E-40 93.15% 13 P:spermatogenesis; C:soluble fraction; C:extracellular space; F:NADP or NADPH binding; P:cell redox homeostasis; F:glutathione-disulfide reductase activity; P:glutathione metabolic process; P:electron transport; F:FAD binding; C:cytosol; C:mitochondrion; F:protein homodimerization activity; F:glutathione binding EC:1.8.1.7  
contig05868 ---NA--- 750 0     0      
contig05869 ---NA--- 277 0     0      
contig05870 solute carrier family member 9 243 20 1.77E-27 83.85% 1 C:membrane attack complex    
contig05871 ---NA--- 263 0     0      
contig05872 cellular myelocytomatosis oncogene 240 20 7.19E-37 97.30% 4 P:transcription antitermination; F:transcription factor activity; C:nucleus; P:regulation of transcription, DNA-dependent    
contig05873 ---NA--- 458 0     0      
contig05874 ---NA--- 266 0     0      
contig05875 ---NA--- 129 0     0      
contig05876 non-structural maintenance of chromosomes element 1 homolog 239 20 1.28E-17 82.95% 3 F:metal ion binding; P:response to DNA damage stimulus; P:DNA metabolic process    
contig05877 member ras oncogene family 402 20 6.33E-49 83.75% 15 P:cytokinesis; C:intercellular bridge; P:small GTPase mediated signal transduction; P:regulation of transcription, DNA-dependent; C:coated pit; F:phosphatidylinositol-4,5-bisphosphate binding; C:melanosome; F:ATP binding; C:cell projection membrane; F:GTPase activity; F:transcription factor binding; P:endosome transport; C:clathrin-coated endocytic vesicle; P:protein transport; F:GTP binding EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig05878 20s rrna homolog 252 20 3.54E-31 87.75% 2 C:nucleolus; P:ribosome assembly    
contig05879 ef-hand domain member a1 268 20 8.02E-28 72.05% 3 F:calcium ion binding; P:P; C:C    
contig05880 fgfr1 oncogene partner 373 15 1.18E-10 78.80% 1 F:receptor activity    
contig05881 damage-specific dna binding protein 127kda 404 20 3.25E-45 94.65% 6 C:cytoplasm; F:protein binding; P:ubiquitin cycle; F:damaged DNA binding; C:nucleus; P:DNA repair    
contig05882 mmp37-like mitochondrial 440 20 1.29E-70 86.65% 3 P:intracellular protein transmembrane transport; P:protein import into mitochondrial matrix; C:extrinsic to mitochondrial inner membrane    
contig05883 chromosome 10 open reading frame 97 429 20 2.74E-44 94.70% 3 P:apoptosis; C:nucleus; F:calcium ion binding    
contig05884 ---NA--- 255 0     0      
contig05885 novel protein hiv-1 rev binding protein ( zgc:66055) 247 4 3.69E-09 67.00% 3 F:ARF GTPase activator activity; F:zinc ion binding; C:C    
contig05886 ring finger protein 44 257 20 3.65E-28 93.70% 3 P:zinc ion transport; F:zinc ion binding; F:protein binding    
contig05887 member of ras oncogene family 1622 20 2.93E-87 97.00% 7 P:convergent extension; C:cytoplasm; F:protein binding; C:plasma membrane; F:GTP binding; P:cell proliferation; P:small GTPase mediated signal transduction    
contig05888 ---NA--- 269 0     0      
contig05889 ---NA--- 265 0     0      
contig05890 ---NA--- 660 0     0      
contig05891 ---NA--- 685 0     0      
contig05892 ---NA--- 139 0     0      
contig05893 brain protein 16 445 20 3.09E-11 89.45% 1 F:binding    
contig05894 regulatory factor x-associated protein 259 2 1.87E-32 89.00% 0      
contig05895 ---NA--- 386 0     0      
contig05896 ---NA--- 310 0     0      
contig05897 ---NA--- 252 0     0      
contig05898 vesicle-associated membrane protein-associated protein a 1312 20 3.59E-64 80.10% 11 C:tight junction; C:membrane fraction; F:signal transducer activity; C:vesicle; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; P:cellular membrane fusion; C:integral to membrane; F:protein heterodimerization activity; C:endoplasmic reticulum; C:perinuclear region of cytoplasm; C:microtubule    
contig05899 eukaryotic translation initiation factor subunit 6 interacting protein 269 20 4.58E-07 100.00% 2 P:translation; F:protein binding    
contig05900 plastin 3 (t isoform) 268 20 3.14E-40 90.60% 3 P:actin filament organization; F:actin binding; F:calcium ion binding    
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