Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 5701 - 5800:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig05701 adp-ribosylation factor-like 6 interacting protein 2 607 20 1.70E-100 94.40% 4 C:integral to membrane; F:GTPase activity; F:protein binding; F:GTP binding EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig05702 transcriptional adaptor 2 (ada2 yeast)-like 322 20 1.24E-44 94.25% 7 F:transcription cofactor activity; C:chromosome; F:transcription factor activity; C:nucleus; F:zinc ion binding; P:transcription from RNA polymerase II promoter; P:regulation of transcription, DNA-dependent    
contig05703 ---NA--- 282 0     0      
contig05704 rac gtpase activating protein 1 375 20 3.52E-15 87.20% 22 F:iron-sulfur cluster binding; F:zinc ion binding; P:zinc ion transport; P:cytokinesis, initiation of separation; C:microtubule; P:cytokinesis, actomyosin contractile ring assembly; P:sulfate transport; F:protein C-terminus binding; F:gamma-tubulin binding; F:electron carrier activity; P:spermatogenesis; F:alpha-tubulin binding; P:embryonic development; P:neuroblast proliferation; C:acrosomal vesicle; F:diacylglycerol binding; C:spindle; F:beta-tubulin binding; ; F:GTPase activator activity; C:nucleus; P:electron transport    
contig05705 ---NA--- 350 0     0      
contig05706 tumor suppressing subtransferable candidate 1 247 20 9.96E-39 94.90% 1 F:protein binding    
contig05707 ---NA--- 309 0     0      
contig05708 nadh dehydrogenase subunit 2 287 3 3.93E-06 89.00% 10 C:mitochondrial respiratory chain; C:membrane; C:mitochondrial inner membrane; F:NADH dehydrogenase (ubiquinone) activity; C:mitochondrion; P:transport; P:electron transport; P:mitochondrial electron transport, NADH to ubiquinone; F:oxidoreductase activity; P:ATP synthesis coupled electron transport    
contig05709 ch033_danre ame: full=upf0488 protein c8orf33 homolog 299 20 6.56E-30 74.90% 0      
contig05710 valyl-trna synthetase 356 6 4.71E-20 71.50% 3 F:aminoacyl-tRNA ligase activity; P:tRNA aminoacylation for protein translation; F:nucleotide binding    
contig05711 ---NA--- 251 0     0      
contig05712 ---NA--- 290 0     0      
contig05713 ataxia telangiectasia and rad3 related protein 259 20 1.34E-30 93.55% 13 P:DNA repair; P:regulation of protein binding; F:protein serine/threonine kinase activity; P:negative regulation of DNA replication; F:manganese ion binding; F:MutLalpha complex binding; F:MutSalpha complex binding; F:DNA binding; P:DNA damage checkpoint; P:multicellular organismal development; C:chromosome; C:nucleus; P:protein amino acid phosphorylation EC:2.7.11.0  
contig05714 ---NA--- 261 0     0      
contig05715 ---NA--- 267 0     0      
contig05716 transcription factor e2f4 394 2 2.16E-04 71.00% 0      
contig05717 si:busm1- protein 289 2 2.81E-04 49.00% 0      
contig05718 ---NA--- 290 0     0      
contig05719 ---NA--- 237 0     0      
contig05720 ---NA--- 283 0     0      
contig05721 ---NA--- 289 0     0      
contig05722 ---NA--- 251 0     0      
contig05723 ---NA--- 269 0     0      
contig05724 ---NA--- 230 0     0      
contig05725 cell cycle associated protein 1 356 20 5.35E-40 67.25% 2 F:protein binding; C:integral to plasma membrane    
contig05726 ---NA--- 354 0     0      
contig05727 mitochondrial ribosomal protein l3 468 20 6.50E-70 82.45% 5 C:ribosome; F:structural constituent of ribosome; F:RNA binding; P:translation; C:mitochondrion EC:3.6.5.3  
contig05728 ---NA--- 559 0     0      
contig05729 transmembrane protein 5 430 14 8.23E-41 58.00% 5 P:proteolysis; C:integral to membrane; C:membrane; P:P; C:integral to plasma membrane    
contig05730 zinc an1-type domain 1 244 20 3.24E-13 73.95% 1 F:metal ion binding    
contig05731 novel protein vertebrate slain motif member 1 247 1 6.10E-04 68.00% 0      
contig05732 ---NA--- 554 0     0      
contig05733 ---NA--- 240 0     0      
contig05734 nol1 nop2 sun domain member 2 388 20 3.59E-37 89.75% 5 C:cytoplasm; C:nucleolus; P:tRNA methylation; F:tRNA (cytosine-5-)-methyltransferase activity; F:tRNA binding EC:2.1.1.29  
contig05735 ---NA--- 276 0     0      
contig05736 k0841 protein 518 5 7.17E-36 62.80% 2 F:F; C:C    
contig05737 alpha glucosidase ii alpha subunit isoform 2 isoform 2 263 20 9.86E-34 89.25% 5 F:glucan 1,3-alpha-glucosidase activity; P:carbohydrate metabolic process; C:melanosome; C:endoplasmic reticulum; C:Golgi apparatus EC:3.2.1.84  
contig05738 prenyl diphosphate subunit 1 295 20 8.36E-17 89.70% 6 P:isoprenoid biosynthetic process; P:ubiquinone biosynthetic process; P:protein heterotetramerization; F:trans-hexaprenyltranstransferase activity; F:trans-octaprenyltranstransferase activity; F:protein heterodimerization activity EC:2.5.1.30; EC:2.5.1.11  
contig05739 ---NA--- 243 0     0      
contig05740 rna binding motif protein 25 466 20 2.98E-22 70.55% 2 P:mRNA processing; F:nucleotide binding    
contig05741 ---NA--- 246 0     0      
contig05742 ---NA--- 258 0     0      
contig05743 ---NA--- 369 0     0      
contig05744 ---NA--- 260 0     0      
contig05745 ---NA--- 204 0     0      
contig05746 integrator complex subunit 6 241 20 1.79E-11 97.90% 5 C:extracellular space; F:nucleic acid binding; F:ATP binding; C:nucleus; F:ATP-dependent helicase activity    
contig05747 beta- -galactosyltransferase 1 204 2 4.12E-08 97.00% 1 F:transferase activity, transferring glycosyl groups    
contig05748 ---NA--- 277 0     0      
contig05749 ---NA--- 210 0     0      
contig05750 ---NA--- 248 0     0      
contig05751 ---NA--- 284 0     0      
contig05752 chromosome 2 open reading frame 60 224 20 2.90E-17 75.85% 2 P:P; C:C    
contig05753 domain-containing protein c2orf60 518 20 6.22E-72 83.15% 2 P:P; C:C    
contig05754 ---NA--- 250 0     0      
contig05755 eukaryotic translation initiation factor subunit 2 39kda 740 20 1.35E-48 91.15% 14 F:translation initiation factor activity; P:myelination; P:response to glucose stimulus; C:eukaryotic translation initiation factor 2B complex; F:guanyl-nucleotide exchange factor activity; P:response to heat; P:ovarian follicle development; P:response to peptide hormone stimulus; F:ATP binding; F:protein binding; P:regulation of translational initiation; P:oligodendrocyte development; P:cellular response to stimulus; F:GTP binding    
contig05756 ---NA--- 243 0     0      
contig05757 unnamed protein product [Tetraodon nigroviridis] 228 2 2.79E-12 93.00% 0      
contig05758 ---NA--- 351 0     0      
contig05759 ---NA--- 262 0     0      
contig05760 wd repeat domain 53 288 5 4.93E-17 65.40% 0      
contig05761 ---NA--- 280 0     0      
contig05762 yth domain member 1 169 20 5.37E-16 98.70% 2 F:F; P:P    
contig05763 ---NA--- 99 0     0      
contig05764 ---NA--- 290 0     0      
contig05765 tetraspanin 6 258 20 1.02E-30 88.85% 3 C:membrane attack complex; F:signal transducer activity; P:positive regulation of I-kappaB kinase/NF-kappaB cascade    
contig05766 ---NA--- 365 0     0      
contig05767 coiled-coil domain containing 47 326 20 2.11E-44 95.50% 4 P:negative regulation of signal transduction; C:membrane attack complex; C:signal recognition particle, endoplasmic reticulum targeting; F:protein binding EC:3.6.5.4  
contig05768 ---NA--- 363 0     0      
contig05769 ---NA--- 355 0     0      
contig05770 ---NA--- 350 0     0      
contig05771 ---NA--- 261 0     0      
contig05772 ---NA--- 363 0     0      
contig05773 ---NA--- 521 0     0      
contig05774 ---NA--- 336 0     0      
contig05775 polymerase ii (dna directed) polypeptide 437 20 2.31E-19 98.30% 7 P:transcription from RNA polymerase III promoter; F:DNA-directed RNA polymerase activity; F:DNA binding; C:nucleus; F:zinc ion binding; P:regulation of transcription from RNA polymerase I promoter; P:transcription from RNA polymerase II promoter EC:2.7.7.6  
contig05776 ---NA--- 272 0     0      
contig05777 ---NA--- 260 0     0      
contig05778 l mbt-like 3 255 20 9.00E-27 86.40% 4 F:transcription factor activity; C:nucleus; F:zinc ion binding; P:regulation of transcription, DNA-dependent    
contig05779 hydroxysteroid dehydrogenase like 2 522 20 8.21E-59 87.95% 4 ; P:metabolic process; F:oxidoreductase activity; C:mitochondrion    
contig05780 ---NA--- 279 0     0      
contig05781 oxidase (cytochrome c) assembly 1-like 377 20 1.05E-43 73.45% 5 P:protein complex assembly; P:aerobic respiration; C:integral to membrane; P:protein insertion into membrane; C:mitochondrial respiratory chain    
contig05782 ribosomal rna processing 12 homolog ( cerevisiae) 411 20 3.55E-44 85.75% 3 C:nucleus; C:integral to membrane; F:binding    
contig05783 iron-responsive element binding protein 2 162 20 7.06E-16 75.95% 12 F:translation repressor activity; C:cytosol; F:iron-sulfur cluster binding; P:regulation of translation; F:iron-responsive element binding; F:metal ion binding; P:erythrocyte homeostasis; P:protoporphyrinogen IX biosynthetic process; P:cellular iron ion homeostasis; C:endoplasmic reticulum; C:Golgi apparatus; F:hydro-lyase activity EC:4.2.1.0  
contig05784 ---NA--- 422 0     0      
contig05785 ---NA--- 262 0     0      
contig05786 mgc80307 protein 199 8 2.20E-09 72.25% 5 F:protein kinase activity; F:ATP binding; P:apoptosis; F:F; C:C    
contig05787 ---NA--- 274 0     0      
contig05788 ---NA--- 125 0     0      
contig05789 asparaginyl-trna synthetase mitochondrial 241 20 5.89E-31 78.25% 6 F:nucleic acid binding; P:aspartyl-tRNA aminoacylation; F:asparagine-tRNA ligase activity; P:asparaginyl-tRNA aminoacylation; C:mitochondrion; F:nucleotide binding EC:6.1.1.22  
contig05790 ---NA--- 265 0     0      
contig05791 mediator complex subunit 17 248 20 2.38E-32 94.05% 10 P:transcription initiation from RNA polymerase II promoter; P:positive regulation of transcription from RNA polymerase II promoter; F:ligand-dependent nuclear receptor transcription coactivator activity; C:transcription factor complex; F:receptor activity; F:RNA polymerase II transcription mediator activity; F:thyroid hormone receptor binding; ; P:androgen receptor signaling pathway; F:vitamin D receptor binding    
contig05792 ---NA--- 263 0     0      
contig05793 ---NA--- 495 0     0      
contig05794 cdt1 protein 268 20 7.29E-13 73.75% 9 F:DNA binding; C:nucleus; P:DNA replication; C:replication fork; P:regulation of S phase of mitotic cell cycle; F:protein binding; P:DNA replication checkpoint; P:regulation of DNA replication initiation; P:cell cycle    
contig05795 ---NA--- 125 0     0      
contig05796 er degradation mannosidase alpha-like 2 isoform 2 259 20 5.62E-29 91.35% 4 C:extracellular region; C:membrane; F:mannosyl-oligosaccharide 1,2-alpha-mannosidase activity; F:calcium ion binding EC:3.2.1.113  
contig05797 ---NA--- 267 0     0      
contig05798 vacuolar protein sorting 26 homolog b 252 20 3.31E-37 99.90% 6 C:retromer complex; F:protein binding; C:membrane attack complex; P:vacuolar transport; C:cytosol; P:protein transport    
contig05799 gaba receptor-associated 2 1100 20 1.32E-63 98.85% 12 F:GABA receptor binding; F:protein transporter activity; C:cytoskeleton; C:Golgi membrane; F:receptor activity; P:intra-Golgi vesicle-mediated transport; P:proteolysis; F:ATP binding; F:actin binding; F:beta-tubulin binding; F:serine-type endopeptidase activity; P:intracellular protein transport EC:3.4.21.0  
contig05800 ---NA--- 249 0     0      
100 Rows returned.
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