Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 5501 - 5600:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig05501 ---NA--- 669 0     0      
contig05502 unnamed protein product [Tetraodon nigroviridis] 243 1 1.27E-33 89.00% 0      
contig05503 ---NA--- 238 0     0      
contig05504 septin 8 499 20 1.67E-60 96.30% 4 C:septin complex; P:cell cycle; F:protein binding; F:GTP binding    
contig05505 cg13148 cg13148-pa 250 2 5.29E-24 86.50% 0      
contig05506 ---NA--- 254 0     0      
contig05507 ---NA--- 287 0     0      
contig05508 huntingtin interacting protein 1 related 264 20 7.54E-26 75.35% 5 C:cytoskeleton; F:actin binding; F:phospholipid binding; P:receptor-mediated endocytosis; C:coated pit    
contig05509 glycosylphosphatidylinositol anchor attachment protein 1 homolog 720 20 2.74E-95 76.25% 8 C:GPI-anchor transamidase complex; P:attachment of GPI anchor to protein; P:protein retention in ER lumen; P:protein complex assembly; F:GPI anchor binding; F:tubulin binding; C:integral to plasma membrane; F:GPI-anchor transamidase activity    
contig05510 src family kinase 359 20 1.90E-29 68.80% 8 P:protein amino acid phosphorylation; F:non-membrane spanning protein tyrosine kinase activity; C:extracellular space; F:binding; P:negative regulation of cell proliferation; ; P:regulation of cell cycle; C:nucleus EC:2.7.10.2  
contig05511 ---NA--- 303 0     0      
contig05512 hypoxanthine-guanine phosphoribosyltransferase 242 20 8.49E-38 87.00% 10 P:purine ribonucleoside salvage; P:purine nucleotide biosynthetic process; P:positive regulation of dopamine metabolic process; F:hypoxanthine phosphoribosyltransferase activity; F:magnesium ion binding; P:protein homotetramerization; F:protein homodimerization activity; P:behavior; C:cytoplasm; P:hypoxanthine metabolic process EC:2.4.2.8  
contig05513 ---NA--- 121 0     0      
contig05514 death associated protein 3 285 20 2.15E-12 85.40% 4 C:mitochondrial ribosome; C:small ribosomal subunit; P:induction of apoptosis by extracellular signals; P:response to hypoxia    
contig05515 ---NA--- 269 0     0      
contig05516 chromosome 7 open reading frame 59 329 20 1.41E-24 73.75% 0      
contig05517 autosomal recessive 1a 687 20 2.13E-74 80.70% 1 C:nucleolus    
contig05518 wd repeat domain 76 375 20 3.17E-24 75.20% 0      
contig05519 ---NA--- 260 0     0      
contig05520 inhibitor of growth member 4 500 20 1.79E-78 90.75% 11 P:cell cycle arrest; P:negative regulation of growth; F:zinc ion binding; P:apoptosis; P:zinc ion transport; P:negative regulation of cell proliferation; F:protein binding; P:protein amino acid acetylation; P:negative regulation of cell cycle; P:negative regulation of transcription, DNA-dependent; C:nucleus    
contig05521 acyl-coenzyme a binding domain containing 3 326 20 2.42E-24 95.20% 7 C:Golgi membrane; F:receptor activity; P:steroid biosynthetic process; P:transport; F:acyl-CoA binding; C:integral to membrane; C:mitochondrion    
contig05522 werner helicase interacting protein 1 726 20 1.15E-44 90.60% 9 F:serine-type endopeptidase activity; P:regulation of DNA replication initiation; F:ATPase activity; F:DNA binding; F:protein binding; F:ATP binding; P:DNA synthesis involved in DNA repair; F:ATP-dependent peptidase activity; C:nucleus EC:3.4.21.0  
contig05523 5 -3 exoribonuclease 2 834 20 7.72E-134 95.30% 13 P:DNA recombination; P:DNA repair; P:cell growth; F:zinc ion binding; F:nucleic acid binding; F:5'-3' exoribonuclease activity; C:nucleolus; P:regulation of transcription, DNA-dependent; P:spermatogenesis; F:protein binding; P:microtubule-based process; P:transcription termination; P:mRNA processing    
contig05524 ---NA--- 162 0     0      
contig05525 ---NA--- 181 0     0      
contig05526 muscle glycogen phosphorylase 352 20 5.01E-46 95.35% 11 F:glycogen phosphorylase activity; C:sarcoplasmic reticulum; F:drug binding; C:Z disc; P:glycogen catabolic process; P:cellular calcium ion homeostasis; F:protein homodimerization activity; F:AMP binding; F:pyridoxal phosphate binding; P:response to cAMP; F:sugar binding    
contig05527 phosphoglucose isomerase 920 20 1.27E-135 91.60% 4 C:cytoplasm; P:gluconeogenesis; F:glucose-6-phosphate isomerase activity; P:glycolysis EC:5.3.1.9  
contig05528 ---NA--- 320 0     0      
contig05529 ---NA--- 261 0     0      
contig05530 adenylosuccinate synthase 268 20 1.80E-11 94.50% 5 C:cytoplasm; F:adenylosuccinate synthase activity; F:GTP binding; P:AMP biosynthetic process; F:magnesium ion binding EC:6.3.4.4  
contig05531 ---NA--- 434 0     0      
contig05532 small subunit processome homolog 250 20 2.00E-39 99.80% 3 F:RNA binding; C:small nucleolar ribonucleoprotein complex; F:protein binding    
contig05533 ---NA--- 199 0     0      
contig05534 s-adenosylhomocysteine hydrolase 412 20 1.34E-67 93.70% 15 C:cytosol; F:NAD or NADH binding; F:copper ion binding; F:adenyl nucleotide binding; P:circadian sleep/wake cycle; P:chronic inflammatory response to antigenic stimulus; P:response to nutrient; P:S-adenosylhomocysteine catabolic process; F:identical protein binding; F:adenosylhomocysteinase activity; F:protein self-association; C:melanosome; P:one-carbon metabolic process; C:synaptosome; C:nucleus EC:3.3.1.1  
contig05535 popeye domain containing 3 652 20 2.78E-94 80.10% 3 C:ribosome; C:integral to membrane; P:translation EC:3.6.5.3  
contig05536 39s ribosomal protein mitochondrial precursor 588 20 7.36E-42 67.60% 3 C:mitochondrial large ribosomal subunit; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig05537 metastasis associated 1 member 2 441 20 1.47E-45 81.75% 14 F:histone deacetylase activity; F:zinc ion binding; P:positive regulation of transcription from RNA polymerase II promoter; P:chromatin assembly or disassembly; F:transcription repressor activity; C:chromatin remodeling complex; P:negative regulation of transcription from RNA polymerase II promoter; F:sequence-specific DNA binding; C:NuRD complex; F:transcription activator activity; F:protein binding; F:transcription factor activity; P:DNA packaging; P:chromatin remodeling    
contig05538 ---NA--- 302 0     0      
contig05539 ---NA--- 293 0     0      
contig05540 peptidylprolyl isomerase -like 1 634 20 3.44E-78 93.90% 8 C:integral to plasma membrane; P:protein folding; P:RNA splicing; P:neurotransmitter transport; C:spliceosomal complex; P:mRNA processing; F:neurotransmitter:sodium symporter activity; F:peptidyl-prolyl cis-trans isomerase activity EC:5.2.1.8  
contig05541 ---NA--- 654 0     0      
contig05542 ---NA--- 454 0     0      
contig05543 ---NA--- 271 0     0      
contig05544 ---NA--- 233 0     0      
contig05545 ---NA--- 240 0     0      
contig05546 saps domain member 3 810 20 1.38E-15 49.00% 2 P:regulation of phosphoprotein phosphatase activity; F:protein phosphatase binding    
contig05547 ---NA--- 136 0     0      
contig05548 ---NA--- 303 0     0      
contig05549 ---NA--- 276 0     0      
contig05550 ---NA--- 264 0     0      
contig05551 ---NA--- 253 0     0      
contig05552 syntaxin 2 371 20 3.77E-25 80.45% 20 C:soluble fraction; P:embryo implantation; C:integral to membrane; C:midbody; P:acrosome reaction; F:SNARE binding; P:plasma membrane fusion; P:cytokinetic cell separation; P:gut morphogenesis; F:SNAP receptor activity; C:endosome; P:microvillus assembly; C:microsome; P:epithelial cell differentiation; F:calcium-dependent protein binding; P:signal transduction; C:apical plasma membrane; P:ectoderm development; C:basolateral plasma membrane; P:intracellular protein transport    
contig05553 upf0472 protein c16orf72 492 20 2.82E-49 78.20% 2 F:F; P:P    
contig05554 rer1 protein 543 20 1.16E-53 94.20% 2 P:retrograde vesicle-mediated transport, Golgi to ER; C:integral to Golgi membrane    
contig05555 ---NA--- 432 0     0      
contig05556 dna2 dna replication helicase 2-like 291 20 1.33E-30 82.00% 5 F:ATP binding; F:hydrolase activity; F:helicase activity; F:DNA binding; P:DNA replication    
contig05557 ---NA--- 295 0     0      
contig05558 ---NA--- 249 0     0      
contig05559 riken cdna 1200011m11 gene 363 5 5.88E-23 66.60% 0      
contig05560 ---NA--- 576 0     0      
contig05561 midasin homolog 242 20 9.41E-29 98.95% 5 F:ATPase activity; P:regulation of protein complex assembly; F:ATP binding; F:unfolded protein binding; C:nucleus    
contig05562 udp- c:betagal beta- -n-acetylglucosaminyltransferase 5 482 20 1.87E-53 75.35% 8 P:central nervous system development; F:beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity; C:Golgi apparatus; P:sphingolipid biosynthetic process; F:galactosyltransferase activity; P:protein amino acid glycosylation; C:integral to membrane; F:lipopolysaccharide N-acetylglucosaminyltransferase activity EC:2.4.1.163; EC:2.4.1.56  
contig05563 ---NA--- 533 0     0      
contig05564 ---NA--- 375 0     0      
contig05565 ---NA--- 371 0     0      
contig05566 zinc finger matrin-type protein 5 254 20 2.31E-14 95.35% 4 F:nucleic acid binding; C:spliceosomal complex; P:zinc ion transport; F:zinc ion binding    
contig05567 ---NA--- 274 0     0      
contig05568 retinoblastoma binding protein 8 259 1 7.88E-07 67.00% 2 F:F; C:C    
contig05569 ---NA--- 255 0     0      
contig05570 ---NA--- 306 0     0      
contig05571 translocase of outer mitochondrial membrane 20 homolog 401 20 1.80E-19 99.60% 6 F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity; ; C:mitochondrial outer membrane translocase complex; F:receptor activity; C:membrane attack complex; F:unfolded protein binding    
contig05572 ---NA--- 268 0     0      
contig05573 ---NA--- 257 0     0      
contig05574 tryptophanyl-trna synthetase 300 20 2.59E-10 95.05% 4 C:cytoplasm; F:tryptophan-tRNA ligase activity; P:tryptophanyl-tRNA aminoacylation; F:ATP binding EC:6.1.1.2  
contig05575 ---NA--- 268 0     0      
contig05576 ---NA--- 277 0     0      
contig05577 centromere protein h 282 4 3.11E-16 77.75% 0      
contig05578 loc100127864 protein 305 2 8.57E-06 60.50% 0      
contig05579 ---NA--- 299 0     0      
contig05580 ---NA--- 403 0     0      
contig05581 ---NA--- 380 0     0      
contig05582 PREDICTED: similar to predicted protein [Danio rerio] 652 2 6.77E-08 85.00% 0      
contig05583 ---NA--- 456 0     0      
contig05584 ---NA--- 243 0     0      
contig05585 ---NA--- 255 0     0      
contig05586 ---NA--- 255 0     0      
contig05587 ---NA--- 273 0     0      
contig05588 rest corepressor 1 253 20 1.07E-27 100.00% 5 P:chromatin modification; F:DNA binding; F:protein binding; C:nucleus; P:regulation of transcription, DNA-dependent    
contig05589 ---NA--- 277 0     0      
contig05590 ---NA--- 532 0     0      
contig05591 ---NA--- 241 0     0      
contig05592 ---NA--- 289 0     0      
contig05593 ---NA--- 363 0     0      
contig05594 ---NA--- 272 0     0      
contig05595 chromosome 10 open reading frame 119 424 20 1.15E-58 78.25% 0      
contig05596 hira interacting protein 5 287 20 1.06E-35 97.25% 5 C:cytosol; F:iron ion binding; P:iron-sulfur cluster assembly; F:iron-sulfur cluster binding; F:protein binding    
contig05597 ---NA--- 273 0     0      
contig05598 actin-related protein 2 3 complex subunit 4 246 20 1.07E-32 99.90% 2 C:cytoskeleton; P:actin filament polymerization    
contig05599 member ras oncogene family-like 5 426 20 5.55E-37 79.10% 1 F:GTP binding    
contig05600 ---NA--- 204 0     0      
100 Rows returned.
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