Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 5401 - 5500:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig05401 ---NA--- 265 0     0      
contig05402 cellular myelocytomatosis oncogene 250 20 1.07E-24 88.80% 3 F:transcription factor activity; C:nucleus; P:regulation of transcription, DNA-dependent    
contig05403 rna binding motif protein 19 376 7 8.96E-11 85.86% 3 F:RNA binding; P:gut morphogenesis; F:nucleotide binding    
contig05404 ---NA--- 244 0     0      
contig05405 exocyst complex component 8 250 20 1.53E-39 94.60% 6 F:phosphoinositide binding; P:exocytosis; F:Ral GTPase binding; C:exocyst; C:cell projection; P:protein transport    
contig05406 ---NA--- 257 0     0      
contig05407 ---NA--- 245 0     0      
contig05408 aldehyde dehydrogenase 1 member l1 255 20 1.87E-40 92.35% 8 C:cytoplasm; P:one-carbon metabolic process; P:biosynthetic process; F:hydroxymethyl-, formyl- and related transferase activity; F:formyltetrahydrofolate dehydrogenase activity; F:cofactor binding; P:obs0-formyltetrahydrofolate catabolic process; F:phosphopantetheine binding EC:2.1.2.0; EC:1.5.1.6  
contig05409 ---NA--- 243 0     0      
contig05410 ---NA--- 247 0     0      
contig05411 ---NA--- 356 0     0      
contig05412 heavy polypeptide isoform cra_a 288 20 6.87E-27 98.20% 10 P:vesicle-mediated transport; F:protein transporter activity; C:clathrin coat of coated pit; C:mitochondrion; C:clathrin coat of trans-Golgi network vesicle; P:protein complex assembly; C:melanosome; F:protein binding; P:intracellular protein transport; F:structural molecule activity    
contig05413 chromodomain helicase dna binding protein 4 263 20 9.22E-32 84.50% 11 F:zinc ion binding; P:zinc ion transport; F:ATP-dependent helicase activity; P:chromatin assembly or disassembly; P:regulation of transcription; F:DNA binding; F:ATP binding; C:chromatin; F:transcription factor binding; F:chromatin binding; C:nucleus    
contig05414 peptidase (mitochondrial processing) beta 333 20 8.78E-35 98.20% 5 C:mitochondrial inner membrane; C:mitochondrial matrix; F:mitochondrial processing peptidase activity; P:proteolysis; F:zinc ion binding EC:3.4.24.64  
contig05415 ---NA--- 487 0     0      
contig05416 tight junction protein 2 (zona occludens 2) 770 20 4.52E-74 51.80% 1 C:cell part    
contig05417 ---NA--- 241 0     0      
contig05418 hiv-1 rev binding protein isoform 1 229 20 3.63E-20 83.95% 10 P:spermatogenesis; P:cell differentiation; F:DNA binding; P:regulation of ARF GTPase activity; P:multicellular organismal development; P:transport; F:ARF GTPase activator activity; C:cytoplasmic vesicle; C:nucleus; F:zinc ion binding    
contig05419 ---NA--- 246 0     0      
contig05420 ---NA--- 260 0     0      
contig05421 ---NA--- 588 0     0      
contig05422 ---NA--- 255 0     0      
contig05423 ---NA--- 252 0     0      
contig05424 rwd domain containing 2b 375 20 5.67E-24 72.15% 3 F:F; P:P; C:C    
contig05425 ---NA--- 300 0     0      
contig05426 chromosome 17 open reading frame 61 420 20 3.38E-42 71.10% 3 C:mitochondrial inner membrane; C:integral to membrane; C:macromolecular complex    
contig05427 ---NA--- 251 0     0      
contig05428 ---NA--- 256 0     0      
contig05429 ---NA--- 375 0     0      
contig05430 ---NA--- 315 0     0      
contig05431 ---NA--- 268 0     0      
contig05432 argininosuccinate synthetase 1 241 20 1.19E-15 91.60% 6 P:arginine biosynthetic process; P:urea cycle; F:protein binding; F:ATP binding; F:argininosuccinate synthase activity; C:mitochondrion EC:6.3.4.5  
contig05433 ---NA--- 248 0     0      
contig05434 ---NA--- 256 0     0      
contig05435 ---NA--- 228 0     0      
contig05436 ---NA--- 252 0     0      
contig05437 ---NA--- 394 0     0      
contig05438 myelin expression factor 2 504 20 3.98E-25 76.00% 1 F:nucleic acid binding    
contig05439 ---NA--- 251 0     0      
contig05440 exosome component 4 238 20 7.75E-23 92.95% 7 C:cytoplasm; C:nucleolus; F:3'-5'-exoribonuclease activity; F:RNA binding; F:protein binding; P:rRNA processing; C:exosome (RNase complex)    
contig05441 c2f protein 398 20 7.26E-61 94.15% 3 C:small nucleolar ribonucleoprotein complex; F:protein binding; P:rRNA processing    
contig05442 chromosome 14 open reading frame 169 240 20 1.36E-19 67.90% 3 C:nucleolus; P:ribosome biogenesis; P:chromatin remodeling    
contig05443 ---NA--- 273 0     0      
contig05444 ---NA--- 280 0     0      
contig05445 deah (asp-glu-ala-his) box polypeptide 40 323 20 5.57E-45 87.50% 3 F:nucleic acid binding; F:ATP binding; F:ATP-dependent helicase activity    
contig05446 ---NA--- 268 0     0      
contig05447 large homolog-associated protein 5 352 1 1.29E-09 88.00% 2 F:F; C:C    
contig05448 ---NA--- 284 0     0      
contig05449 zinc finger protein 313 428 20 5.88E-63 72.85% 3 C:intracellular; F:zinc ion binding; F:protein binding    
contig05450 ---NA--- 426 0     0      
contig05451 ---NA--- 250 0     0      
contig05452 ---NA--- 435 0     0      
contig05453 nibrin isoform 1 241 20 2.04E-15 69.20% 20 C:nuclear inclusion body; P:in utero embryonic development; P:mitotic cell cycle G2/M transition DNA damage checkpoint; C:nucleus; P:G1/S transition checkpoint; C:chromosome; P:meiosis; P:response to DNA damage stimulus; P:cell cycle; F:protein N-terminus binding; P:regulation of fibroblast proliferation; P:telomere maintenance; P:double-strand break repair; P:blastocyst growth; C:chromosome, telomeric region; C:Mre11 complex; F:transcription factor binding; P:DNA repair; C:intracellular; P:isotype switching    
contig05454 ---NA--- 465 0     0      
contig05455 glucosamine-6-phosphate deaminase 2 252 20 2.08E-15 97.30% 2 P:N-acetylglucosamine metabolic process; F:glucosamine-6-phosphate deaminase activity EC:3.5.99.6  
contig05456 claudin 13 207 3 3.04E-11 74.67% 3 C:tight junction; F:structural molecule activity; C:integral to membrane    
contig05457 ---NA--- 264 0     0      
contig05458 ---NA--- 272 0     0      
contig05459 ---NA--- 250 0     0      
contig05460 ---NA--- 248 0     0      
contig05461 g kinase anchoring protein 1 246 6 4.51E-15 77.00% 1 C:C    
contig05462 ---NA--- 258 0     0      
contig05463 egl nine homolog 1 266 20 1.12E-45 94.20% 13 P:response to hypoxia; F:zinc ion binding; P:zinc ion transport; P:negative regulation of transcription factor activity; P:heart development; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; P:oxygen homeostasis; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; P:protein metabolic process; F:L-ascorbic acid binding; P:embryonic placenta development; F:protein binding; F:iron ion binding EC:1.14.11.0; EC:1.13.11.0  
contig05464 ---NA--- 242 0     0      
contig05465 ---NA--- 264 0     0      
contig05466 ---NA--- 267 0     0      
contig05467 zinc ran-binding domain containing 1 403 20 5.73E-42 96.85% 4 C:cytoplasm; C:nucleus; F:zinc ion binding; F:protein binding    
contig05468 ---NA--- 280 0     0      
contig05469 ---NA--- 279 0     0      
contig05470 exosome component 6 512 20 1.37E-76 67.45% 3 F:exonuclease activity; P:RNA processing; C:intracellular part    
contig05471 serine dehydratase-like 245 2 2.74E-12 89.50% 0      
contig05472 ---NA--- 275 0     0      
contig05473 ---NA--- 282 0     0      
contig05474 ubiquitin carboxyl-terminal hydrolase 5 279 20 4.77E-41 82.25% 9 C:lysosome; F:protein binding; P:ubiquitin-dependent protein catabolic process; F:calcium ion binding; P:ubiquitin cycle; F:ubiquitin-specific protease 5 activity; F:cysteine-type endopeptidase activity; F:endopeptidase inhibitor activity; F:zinc ion binding EC:3.4.22.0  
contig05475 ---NA--- 254 0     0      
contig05476 septin 7 543 20 2.94E-81 93.25% 10 P:protein heterooligomerization; F:GTP binding; C:synaptosome; F:protein binding; P:cytokinesis; P:cell cycle; C:stress fiber; C:septin complex; C:nucleus; F:structural molecule activity    
contig05477 transcription factor mitochondrial 548 20 4.84E-39 67.60% 5 P:DNA-dependent DNA replication; F:transcription factor activity; P:transcription from mitochondrial promoter; C:mitochondrion; P:regulation of transcription from RNA polymerase I promoter    
contig05478 ---NA--- 267 0     0      
contig05479 zinc finger protein 227 204 20 7.51E-10 65.85% 1 F:binding    
contig05480 ---NA--- 271 0     0      
contig05481 ---NA--- 253 0     0      
contig05482 novel protein (zgc:110063) 362 18 6.95E-32 85.83% 3 P:negative regulation of signal transduction; C:extracellular region; C:signal recognition particle, endoplasmic reticulum targeting EC:3.6.5.4  
contig05483 enhancer of polycomb homolog 2 691 20 1.42E-25 56.75% 6 P:regulation of transcription, DNA-dependent; P:DNA repair; P:response to DNA damage stimulus; P:transcription; P:chromatin modification; C:nucleus    
contig05484 ---NA--- 283 0     0      
contig05485 ---NA--- 402 0     0      
contig05486 ---NA--- 461 0     0      
contig05487 ---NA--- 277 0     0      
contig05488 bicoid-interacting 3 256 20 1.93E-37 82.15% 1 F:S-adenosylmethionine-dependent methyltransferase activity    
contig05489 ---NA--- 255 0     0      
contig05490 regulator of cohesion homolog a 244 20 2.57E-10 90.60% 4 P:mitosis; F:identical protein binding; C:nucleus; P:cell division    
contig05491 nol1 nop2 sun domain member 2 311 20 2.16E-17 86.85% 5 C:cytoplasm; C:nucleolus; P:tRNA methylation; F:tRNA (cytosine-5-)-methyltransferase activity; F:tRNA binding EC:2.1.1.29  
contig05492 step ii splicing factor slu7 382 20 2.39E-48 83.15% 9 C:cytoplasm; F:pre-mRNA 3'-splice site binding; C:spliceosomal complex; P:alternative nuclear mRNA splicing, via spliceosome; F:second spliceosomal transesterification activity; C:small nuclear ribonucleoprotein complex; C:nuclear speck; F:zinc ion binding; P:nuclear mRNA 3'-splice site recognition    
contig05493 ---NA--- 330 0     0      
contig05494 ---NA--- 297 0     0      
contig05495 ---NA--- 240 0     0      
contig05496 ---NA--- 346 0     0      
contig05497 ---NA--- 250 0     0      
contig05498 pap associated domain containing 1 504 9 1.07E-08 77.22% 0      
contig05499 ---NA--- 266 0     0      
contig05500 ---NA--- 261 0     0      
100 Rows returned.
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