Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 5201 - 5300:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig05201 ---NA--- 269 0     0      
contig05202 ---NA--- 322 0     0      
contig05203 cobw domain containing 2 321 20 8.29E-49 96.20% 1 F:protein binding    
contig05204 growth arrest and dna-damage- beta 596 19 2.72E-07 86.47% 1 P:somitogenesis    
contig05205 ---NA--- 157 0     0      
contig05206 ---NA--- 226 0     0      
contig05207 atp-binding sub-family a member 3 121 20 7.82E-15 84.45% 6 F:ATPase activity; C:plasma membrane; P:transport; P:response to glucocorticoid stimulus; F:ATP binding; C:lamellar body    
contig05208 unnamed protein product [Tetraodon nigroviridis] 247 2 5.87E-23 80.00% 0      
contig05209 eukaryotic translation initiation factor 4e type 2 250 20 2.37E-24 93.25% 5 F:RNA binding; C:cytoplasm; F:protein binding; P:translational initiation; F:translation initiation factor activity    
contig05210 ---NA--- 270 0     0      
contig05211 grb2-associated binding protein 1 283 17 6.68E-19 49.76% 12 P:activation of JUN kinase activity; P:response to oxidative stress; P:epidermal growth factor receptor signaling pathway; C:cytoplasm; P:signal transduction; P:activation of MAPK activity; P:regulation of cell migration; F:protein binding; F:signal transducer activity; F:SH3/SH2 adaptor activity; P:insulin receptor signaling pathway; P:cell proliferation    
contig05212 deah (asp-glu-ala-his) box polypeptide 8 304 20 1.76E-51 100.00% 5 F:RNA binding; F:ATP binding; C:intracellular; F:ATP-dependent helicase activity; F:RNA helicase activity    
contig05213 ---NA--- 305 0     0      
contig05214 ---NA--- 378 0     0      
contig05215 ---NA--- 248 0     0      
contig05216 loc402861 protein 413 20 1.00E-30 67.35% 1 F:protein binding    
contig05217 nadh dehydrogenase 1 alpha 39kda 344 20 3.51E-47 87.10% 9 F:protein binding; C:mitochondrial matrix; P:electron transport; P:transport; P:ubiquinone biosynthetic process; C:mitochondrial respiratory chain complex I; P:response to hypoxia; F:coenzyme binding; F:NADH dehydrogenase activity EC:1.6.99.3  
contig05218 ---NA--- 154 0     0      
contig05219 ---NA--- 234 0     0      
contig05220 ---NA--- 193 0     0      
contig05221 psmd1 protein 283 20 4.05E-16 93.00% 3 F:protein binding; C:cytosol; C:protein complex    
contig05222 ---NA--- 247 0     0      
contig05223 holocarboxylase synthetase 438 20 1.60E-12 83.25% 6 F:biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity; C:mitochondrion; F:biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity; P:protein modification process; F:biotin-[acetyl-CoA-carboxylase] ligase activity; F:biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity EC:6.3.4.11; EC:6.3.4.10; EC:6.3.4.15; EC:6.3.4.9  
contig05224 pyruvate dehydrogenase phosphatase isoenzyme 2 595 20 6.33E-89 78.25% 7 C:protein serine/threonine phosphatase complex; P:carbohydrate utilization; F:[pyruvate dehydrogenase (lipoamide)] phosphatase activity; P:protein amino acid dephosphorylation; F:magnesium-dependent protein serine/threonine phosphatase activity; F:magnesium ion binding; C:mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase complex EC:3.1.3.43  
contig05225 general transcription factor polypeptide 30kda 503 20 1.12E-27 79.60% 9 P:transcription initiation from RNA polymerase II promoter; P:positive regulation of transcription from RNA polymerase II promoter; F:DNA binding; F:ATP binding; F:protein binding; C:transcription factor TFIIF complex; F:helicase activity; F:hydrolase activity; F:RNA polymerase II transcription factor activity    
contig05226 unnamed protein product [Tetraodon nigroviridis] 158 1 2.44E-08 94.00% 0      
contig05227 ---NA--- 317 0     0      
contig05228 mybbp1a protein 351 20 8.30E-33 77.10% 10 C:nucleolus; F:hydrolase activity, hydrolyzing O-glycosyl compounds; F:DNA-directed DNA polymerase activity; P:regulation of transcription, DNA-dependent; P:carbohydrate metabolic process; P:nucleocytoplasmic transport; C:NLS-dependent protein nuclear import complex; P:transcription antitermination; F:transcription factor binding; C:cytoplasm EC:3.2.1.0; EC:2.7.7.7  
contig05229 ---NA--- 296 0     0      
contig05230 calcium calmodulin-dependent protein kinase ii delta 259 20 2.70E-15 92.90% 10 C:T-tubule; F:calmodulin binding; C:calcium- and calmodulin-dependent protein kinase complex; F:ATP binding; P:calcium ion transport; P:protein amino acid autophosphorylation; C:cytoplasm; F:calmodulin-dependent protein kinase activity; C:nucleus; P:cardiac muscle contraction EC:2.7.11.17  
contig05231 ---NA--- 396 0     0      
contig05232 charged multivesicular body protein 2a 426 8 2.97E-06 94.75% 7 C:late endosome membrane; C:cytoplasm; C:membrane; C:membrane attack complex; C:endosome; P:protein transport; P:transport    
contig05233 ---NA--- 193 0     0      
contig05234 alpha- -sialyltransferase st3gal i 238 20 7.25E-21 74.50% 3 F:beta-galactoside alpha-2,3-sialyltransferase activity; C:Golgi apparatus; C:integral to membrane EC:2.4.99.4  
contig05235 ---NA--- 553 0     0      
contig05236 ---NA--- 483 0     0      
contig05237 solute carrier family 30 (zinc transporter) member 4 293 20 1.74E-30 92.85% 5 P:zinc ion transport; C:integral to membrane; F:zinc ion binding; C:endosome membrane; F:zinc ion transmembrane transporter activity    
contig05238 translin 473 20 1.56E-31 90.55% 5 F:sequence-specific DNA binding; C:cytoplasm; C:nucleus; F:protein binding; F:mRNA binding    
contig05239 ---NA--- 279 0     0      
contig05240 ---NA--- 250 0     0      
contig05241 ---NA--- 302 0     0      
contig05242 nucleoporin 205kda 195 20 3.88E-14 85.20% 2 F:hydrolase activity, hydrolyzing O-glycosyl compounds; C:membrane EC:3.2.1.0  
contig05243 rna small nuclear rna export adaptor (phosphorylation regulated) 289 20 2.98E-30 84.75% 6 C:cytoplasm; P:snRNA export from nucleus; F:RNA binding; F:protein binding; C:nucleus; P:protein transport    
contig05244 sorcin 242 20 3.35E-26 79.00% 14 P:regulation of action potential; C:Z disc; P:regulation of heart contraction; F:calcium channel regulator activity; F:calcium ion binding; P:regulation of striated muscle contraction; P:heart development; C:vesicle; F:receptor binding; P:intracellular sequestering of iron ion; P:muscle organ development; P:calcium ion transport; P:signal transduction; C:plasma membrane    
contig05245 dpcd protein 297 20 4.84E-41 84.20% 1 F:protein binding    
contig05246 ---NA--- 451 0     0      
contig05247 ---NA--- 233 0     0      
contig05248 ---NA--- 515 0     0      
contig05249 nucleolar complex associated 2 homolog 454 20 1.54E-55 88.50% 6 F:p53 binding; P:negative regulation of histone acetylation; F:transcription repressor activity; F:nucleosomal histone binding; P:negative regulation of transcription from RNA polymerase II promoter; C:nucleus    
contig05250 26s protease regulatory subunit 8 321 20 1.85E-40 98.10% 10 P:proteasomal ubiquitin-dependent protein catabolic process; C:cytosol; F:transcription cofactor activity; C:proteasome complex; F:thyrotropin-releasing hormone receptor binding; F:ATP binding; F:ATPase activity; C:holo TFIIH complex; P:negative regulation of transcription; P:transcription from RNA polymerase II promoter    
contig05251 kdel (lys-asp-glu-leu) endoplasmic reticulum protein retention receptor 2 614 20 1.57E-69 97.75% 13 P:vesicle-mediated transport; F:protein transporter activity; F:KDEL sequence binding; C:ER-Golgi intermediate compartment; F:receptor activity; C:extracellular space; P:protein retention in ER lumen; C:membrane fraction; C:membrane attack complex; F:protein binding; P:intracellular protein transport; C:endoplasmic reticulum membrane; C:Golgi apparatus    
contig05252 transcription elongation regulator 1 483 20 4.18E-42 92.30% 6 F:transcription coactivator activity; F:RNA polymerase II transcription factor activity; F:transcription factor activity; C:nucleus; P:transcription from RNA polymerase II promoter; P:regulation of transcription, DNA-dependent    
contig05253 ---NA--- 249 0     0      
contig05254 ubiquitin-conjugating enzyme e2g 2 897 20 6.06E-18 97.50% 7 F:protein binding; P:ubiquitin cycle; F:ubiquitin-protein ligase activity; P:ER-associated protein catabolic process; P:regulation of protein metabolic process; C:cytosol; C:endoplasmic reticulum EC:6.3.2.19  
contig05255 ---NA--- 246 0     0      
contig05256 ---NA--- 262 0     0      
contig05257 ---NA--- 406 0     0      
contig05258 ---NA--- 485 0     0      
contig05259 zinc an1-type domain 5 261 20 6.85E-19 94.45% 3 P:zinc ion transport; F:DNA binding; F:zinc ion binding    
contig05260 ankyrin repeat domain 13c 301 20 7.21E-37 95.60% 1 C:endoplasmic reticulum    
contig05261 peroxisomal biogenesis factor 19 411 20 3.23E-21 72.80% 4 P:protein targeting to peroxisome; C:peroxisomal membrane; F:protein binding; C:brush border membrane    
contig05262 kinesin family member 23 323 20 1.13E-16 82.05% 12 P:mitotic spindle elongation; P:microtubule-based movement; F:protein binding; P:mitosis; P:cytokinesis; P:embryonic cleavage; C:spindle; F:ATP binding; C:nucleus; C:kinesin complex; F:microtubule motor activity; C:microtubule    
contig05263 fbxo11 protein 124 20 3.74E-17 79.80% 11 P:ubiquitin-dependent protein catabolic process; F:metal ion binding; F:peptidyl-arginine C-methyltransferase activity; F:ubiquitin-protein ligase activity; P:protein ubiquitination; F:protein binding; F:histone-arginine N-methyltransferase activity; C:ubiquitin ligase complex; P:sensory perception of sound; C:cytoplasm; C:nucleus EC:6.3.2.19; EC:2.1.1.125  
contig05264 ---NA--- 243 0     0      
contig05265 interferon-induced 35 kda protein homolog 538 5 2.44E-16 72.60% 0      
contig05266 ---NA--- 249 0     0      
contig05267 ---NA--- 249 0     0      
contig05268 ---NA--- 423 0     0      
contig05269 rna binding motif protein 4 523 20 8.01E-30 74.00% 7 C:cytoplasm; P:RNA splicing; F:RNA binding; P:mRNA processing; C:nucleus; F:zinc ion binding; F:nucleotide binding    
contig05270 ---NA--- 619 0     0      
contig05271 tripartite motif-containing 59 386 20 4.68E-20 81.20% 0      
contig05272 ---NA--- 277 0     0      
contig05273 ---NA--- 246 0     0      
contig05274 ergic and golgi 2 247 20 4.19E-37 95.60% 5 C:endoplasmic reticulum membrane; C:Golgi apparatus; C:membrane attack complex; P:vesicle-mediated transport; C:ER-Golgi intermediate compartment membrane    
contig05275 solute carrier family member 1 256 20 7.34E-37 91.90% 3 C:integral to membrane; F:choline transmembrane transporter activity; P:choline transport    
contig05276 ---NA--- 263 0     0      
contig05277 ---NA--- 293 0     0      
contig05278 ---NA--- 213 0     0      
contig05279 ---NA--- 265 0     0      
contig05280 hepatocyte growth factor-regulated tyrosine kinase substrate 532 20 7.74E-47 74.75% 11 C:cytosol; C:secretory granule; F:zinc ion binding; C:endosome; P:negative regulation of cell proliferation; P:negative regulation of JAK-STAT cascade; P:regulation of protein catabolic process; F:protein domain specific binding; P:intracellular protein transport; P:endosome transport; C:membrane    
contig05281 ---NA--- 290 0     0      
contig05282 ---NA--- 357 0     0      
contig05283 ---NA--- 258 0     0      
contig05284 gamma-glutamyl cyclotransferase 262 20 7.85E-15 89.50% 0      
contig05285 nitric oxide synthase trafficker 388 20 3.48E-19 84.60% 10 C:cytoskeleton; P:negative regulation of transcription, DNA-dependent; F:DNA binding; C:plasma membrane; F:protein binding; P:signal transduction; C:cytoplasmic vesicle; C:nucleus; P:endocytosis; F:transcription repressor activity    
contig05286 ---NA--- 190 0     0      
contig05287 ---NA--- 253 0     0      
contig05288 ---NA--- 309 0     0      
contig05289 ---NA--- 249 0     0      
contig05290 ---NA--- 257 0     0      
contig05291 p450 isoform cra_a 263 17 8.61E-13 74.41% 17 F:iron ion binding; C:integral to membrane; C:membrane; F:electron carrier activity; F:NADP or NADPH binding; C:mitochondrion; F:enzyme binding; F:FAD binding; P:electron transport; C:microsome; F:oxidoreductase activity; C:endoplasmic reticulum membrane; C:soluble fraction; F:NADPH-hemoprotein reductase activity; C:C; C:endoplasmic reticulum; F:FMN binding    
contig05292 unnamed protein product [Tetraodon nigroviridis] 230 1 1.39E-11 93.00% 0      
contig05293 solute carrier family 30 (zinc transporter) member 5 506 20 4.96E-76 89.95% 5 C:Golgi apparatus; P:zinc ion transport; C:membrane attack complex; F:zinc ion binding; F:zinc ion transmembrane transporter activity    
contig05294 ---NA--- 241 0     0      
contig05295 ---NA--- 419 0     0      
contig05296 ---NA--- 243 0     0      
contig05297 casein kinase delta 261 20 8.05E-36 100.00% 3 P:protein amino acid phosphorylation; F:ATP binding; F:protein serine/threonine kinase activity EC:2.7.11.0  
contig05298 ---NA--- 247 0     0      
contig05299 ---NA--- 427 0     0      
contig05300 sirtuin (silent mating type information regulation 2 homolog) 5 ( cerevisiae) 259 20 7.56E-34 85.95% 9 F:NAD or NADH binding; F:zinc ion binding; P:protein amino acid deacetylation; C:chromatin silencing complex; F:DNA binding; P:chromatin silencing; F:NAD-dependent histone deacetylase activity; P:protein amino acid ADP-ribosylation; F:NAD+ ADP-ribosyltransferase activity EC:2.4.2.30  
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