Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 4801 - 4900:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig04801 ---NA--- 244 0     0      
contig04802 ---NA--- 273 0     0      
contig04803 ---NA--- 243 0     0      
contig04804 ---NA--- 383 0     0      
contig04805 heme oxygenase 2 270 20 1.15E-34 83.90% 7 C:microsome; P:heme oxidation; P:response to oxidative stress; F:electron carrier activity; F:heme oxygenase (decyclizing) activity; F:iron ion binding; C:endoplasmic reticulum EC:1.14.99.3  
contig04806 ---NA--- 262 0     0      
contig04807 ---NA--- 242 0     0      
contig04808 swi snf-related matrix-associated actin-dependent regulator of chromatin a4 280 20 6.06E-20 87.15% 23 P:activation of MAPKKK activity; P:negative regulation of transcription from RNA polymerase II promoter; P:methylation-dependent chromatin silencing; F:ATP-dependent helicase activity; P:embryonic camera-type eye morphogenesis; C:SWI/SNF complex; P:embryonic hindlimb morphogenesis; P:epidermis morphogenesis; P:hindbrain development; F:protein N-terminus binding; P:neural crest cell development; P:glial cell fate determination; P:forebrain development; F:identical protein binding; F:DNA binding; C:heterochromatin; P:blastocyst growth; P:keratinocyte differentiation; F:chromatin binding; P:nucleosome assembly; F:transcription factor binding; F:ATP binding; P:blastocyst hatching    
contig04809 salvador homolog 1 317 20 5.85E-10 70.45% 4 C:DNA-directed RNA polymerase II, core complex; F:protein binding; P:signal transduction; P:transcription from RNA polymerase II promoter    
contig04810 ---NA--- 251 0     0      
contig04811 guanine nucleotide binding protein (g protein) alpha 13 240 20 2.40E-24 91.85% 18 P:platelet activation; P:regulation of cell shape; F:signal transducer activity; P:intracellular protein kinase cascade; P:activation of phospholipase D activity; C:brush border membrane; P:regulation of cell migration; P:elevation of cytosolic calcium ion concentration; C:heterotrimeric G-protein complex; C:melanosome; P:cell differentiation; F:GTPase activity; P:patterning of blood vessels; F:D5 dopamine receptor binding; F:type 1 angiotensin receptor binding; P:in utero embryonic development; P:Rho protein signal transduction; F:GTP binding EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig04812 e2f transcription factor 4 334 20 2.31E-27 79.45% 14 P:regulation of cell cycle; C:transcription factor complex; P:organ morphogenesis; P:cilium assembly; P:regulation of cell size; P:regulation of transcription involved in G1/S-phase of mitotic cell cycle; F:protein binding; F:transcription factor activity; P:regulation of cell proliferation; C:nuclear envelope; C:cytoplasm; P:blood circulation; P:epithelial cell development; P:cell volume homeostasis    
contig04813 kinesin light chain 1 353 20 1.23E-52 81.55% 4 F:microtubule motor activity; C:microtubule; F:protein binding; C:kinesin complex    
contig04814 ---NA--- 272 0     0      
contig04815 ---NA--- 668 0     0      
contig04816 cyclin e2 381 20 5.76E-10 65.10% 3 P:regulation of cell cycle; F:cyclin-dependent protein kinase regulator activity; P:DNA replication initiation    
contig04817 pyridoxine 5 -phosphate oxidase 400 20 1.01E-54 88.95% 3 P:pyridoxine biosynthetic process; F:pyridoxamine-phosphate oxidase activity; F:FMN binding EC:1.4.3.5  
contig04818 novel protein human and mouse caseinolytic atp- proteolytic subunit homolog ( coli) 244 4 2.10E-12 87.75% 0      
contig04819 ---NA--- 444 0     0      
contig04820 phosphatidylinositol glycan anchor class b 201 20 4.25E-29 82.95% 4 C:endoplasmic reticulum membrane; P:GPI anchor biosynthetic process; F:mannosyltransferase activity; C:membrane attack complex    
contig04821 ---NA--- 251 0     0      
contig04822 unnamed protein product [Tetraodon nigroviridis] 256 1 1.59E-07 88.00% 0      
contig04823 ---NA--- 481 0     0      
contig04824 exosome component 3 1184 20 9.11E-88 76.30% 6 C:nuclear exosome (RNase complex); F:3'-5'-exoribonuclease activity; C:cytoplasmic exosome (RNase complex); F:RNA binding; F:protein binding; P:rRNA processing    
contig04825 leucine rich repeat (in flii) interacting protein 2 309 20 4.46E-47 88.40% 1 C:C    
contig04826 ---NA--- 369 0     0      
contig04827 trna selenocysteine associated protein 1 264 20 2.43E-16 78.30% 6 C:cytoplasm; P:selenocysteine incorporation; F:RNA binding; F:protein binding; C:nucleus; F:nucleotide binding    
contig04828 chromosome 21 open reading frame 45 375 17 4.12E-40 64.12% 3 F:F; P:P; C:C    
contig04829 chromosome 4 open reading frame 14 428 20 1.80E-17 75.90% 1 C:mitochondrial inner membrane    
contig04830 ---NA--- 656 0     0      
contig04831 ---NA--- 242 0     0      
contig04832 ---NA--- 263 0     0      
contig04833 ---NA--- 355 0     0      
contig04834 ---NA--- 267 0     0      
contig04835 ---NA--- 333 0     0      
contig04836 chromosome transmission fidelity factor 18 homolog 259 20 1.34E-30 62.90% 3 F:ATP binding; F:nucleotide binding; F:nucleoside-triphosphatase activity    
contig04837 ---NA--- 803 0     0      
contig04838 ---NA--- 259 0     0      
contig04839 ---NA--- 133 0     0      
contig04840 ---NA--- 398 0     0      
contig04841 ---NA--- 119 0     0      
contig04842 ---NA--- 257 0     0      
contig04843 ---NA--- 386 0     0      
contig04844 pre-mrna splicing factor prp8 275 20 7.27E-15 100.00% 3 C:U5 snRNP; ; P:nuclear mRNA splicing, via spliceosome    
contig04845 n-sulfoglucosamine sulfohydrolase 666 20 2.60E-50 75.45% 4 F:sulfuric ester hydrolase activity; C:lysosome; F:protein binding; P:heparan sulfate proteoglycan metabolic process EC:3.1.6.0  
contig04846 cop9 constitutive photomorphogenic homolog subunit 2 506 20 2.03E-53 99.90% 9 C:cytoplasm; P:neuron differentiation; F:signal transducer activity; P:cell proliferation; F:transcription corepressor activity; P:signal transduction; C:signalosome; P:negative regulation of transcription; P:transcription from RNA polymerase II promoter    
contig04847 deah (asp-glu-ala-his) box polypeptide 33 257 20 4.32E-21 83.40% 4 F:nucleic acid binding; F:ATP binding; C:nucleus; F:ATP-dependent helicase activity    
contig04848 homolog 2 1533 20 2.59E-97 75.30% 1 F:transferase activity    
contig04849 ---NA--- 405 0     0      
contig04850 ---NA--- 773 0     0      
contig04851 sorting and assembly machinery component 50 homolog ( cerevisiae) 322 20 4.57E-31 98.95% 3 C:mitochondrial inner membrane; C:integral to membrane; C:mitochondrial outer membrane    
contig04852 ---NA--- 277 0     0      
contig04853 rna binding homolog 1 396 20 9.18E-56 82.75% 5 F:double-stranded RNA binding; C:microtubule associated complex; F:protein binding; P:germ cell development; C:rough endoplasmic reticulum    
contig04854 ---NA--- 251 0     0      
contig04855 ring finger protein 180 492 20 2.09E-44 72.80% 1 F:binding    
contig04856 transmembrane phosphatase with tensin homology 252 3 3.33E-13 84.67% 4 C:integral to membrane; F:ion channel activity; F:protein tyrosine/serine/threonine phosphatase activity; P:ion transport    
contig04857 ---NA--- 340 0     0      
contig04858 rna binding motif protein 19 351 20 3.73E-33 92.90% 4 C:nucleolus; P:gut morphogenesis; F:RNA binding; F:nucleotide binding    
contig04859 adp-ribosylation factor-like 4d 589 20 5.10E-71 86.15% 8 F:GTP binding; P:vesicle-mediated transport; P:intracellular protein transport; P:protein secretion; C:nucleus; P:small GTPase mediated signal transduction; F:GTPase activity; F:transporter activity EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig04860 general transcription factor polypeptide alpha 35kda 490 20 9.15E-40 75.70% 4 F:F; P:transcription; F:DNA binding; C:C    
contig04861 sulfatase modifying factor 2 335 20 1.14E-58 85.65% 3 F:protein homodimerization activity; F:calcium ion binding; C:endoplasmic reticulum lumen    
contig04862 0610030e20rik protein 423 14 3.50E-23 67.86% 0      
contig04863 zgc:162082 protein 248 4 9.72E-10 81.00% 2 P:P; C:C    
contig04864 coatomer protein subunit gamma 2 1026 20 6.78E-136 93.35% 10 C:viral capsid; C:COPI vesicle coat; F:protein transporter activity; C:Golgi membrane; P:retrograde vesicle-mediated transport, Golgi to ER; P:intra-Golgi vesicle-mediated transport; P:protein complex assembly; F:protein binding; P:intracellular protein transport; F:structural molecule activity    
contig04865 apoptosis antagonizing transcription factor 267 20 1.97E-26 81.30% 9 P:embryonic cleavage; C:nucleolus; P:ribosome biogenesis; P:anti-apoptosis; P:cell adhesion; F:protein binding; F:transcription factor activity; P:negative regulation of amyloid precursor protein biosynthetic process; P:regulation of mitotic cell cycle    
contig04866 centrosome and spindle pole associated protein 1 343 2 3.68E-04 66.00% 0      
contig04867 rad51 homolog ( coli) 256 20 2.70E-39 96.90% 19 F:single-stranded DNA-dependent ATPase activity; F:damaged DNA binding; F:double-stranded DNA binding; P:positive regulation of DNA ligation; C:condensed nuclear chromosome; P:DNA unwinding involved in replication; P:protein homooligomerization; F:protein C-terminus binding; P:reciprocal meiotic recombination; P:double-strand break repair via homologous recombination; F:identical protein binding; P:mitotic recombination; F:sequence-specific DNA binding; F:ATP binding; F:recombinase activity; C:PML body; F:single-stranded DNA binding; P:response to cadmium ion; P:response to methylmercury    
contig04868 smarca4 protein 307 20 2.30E-35 97.90% 7 P:neural crest cell development; P:central nervous system development; F:helicase activity; P:activation of MAPKKK activity; F:DNA binding; F:ATP binding; P:embryonic camera-type eye morphogenesis    
contig04869 lethal k09913 cg3082-pc 546 20 1.88E-67 63.90% 0      
contig04870 ---NA--- 241 0     0      
contig04871 diptheria toxin resistance protein required for diphthamide biosynthesis-like 1 463 20 3.63E-66 88.45% 2 C:nucleus; C:cytoplasm    
contig04872 tribbles homolog 2 282 2 9.03E-16 86.00% 0      
contig04873 fad1 flavin adenine dinucleotide synthetase homolog 387 19 2.93E-14 76.95% 2 F:FMN adenylyltransferase activity; P:Mo-molybdopterin cofactor biosynthetic process EC:2.7.7.2  
contig04874 ---NA--- 263 0     0      
contig04875 ---NA--- 414 0     0      
contig04876 sorting and assembly machinery component 50 homolog 631 20 2.52E-73 97.05% 3 C:mitochondrial inner membrane; C:integral to membrane; C:mitochondrial outer membrane    
contig04877 deleted in azoospermia-like 529 20 1.92E-63 80.20% 10 F:mRNA 3'-UTR binding; P:positive regulation of translational initiation; F:translation activator activity; P:positive regulation of meiosis; P:spermatogenesis; F:nucleotide binding; C:polysome; P:germ cell development; P:oogenesis; C:cytoplasm    
contig04878 ---NA--- 247 0     0      
contig04879 ---NA--- 247 0     0      
contig04880 unq655 pro1286 precursor 267 6 1.29E-09 90.50% 0      
contig04881 leucine-rich ppr-motif containing 280 20 3.22E-21 80.90% 11 F:RNA binding; C:nuclear outer membrane; C:cytoskeleton; C:mitochondrion; P:regulation of transcription, DNA-dependent; F:actin filament binding; C:perinuclear region of cytoplasm; F:single-stranded DNA binding; F:beta-tubulin binding; C:nuclear inner membrane; P:mRNA transport    
contig04882 small 1 501 20 2.97E-20 58.70% 5 F:metal ion binding; F:ARF GTPase activator activity; P:regulation of ARF GTPase activity; F:zinc ion binding; C:plasma membrane    
contig04883 ---NA--- 267 0     0      
contig04884 ras association ( af-6) domain family 1 567 20 4.52E-38 72.10% 2 F:metal ion binding; P:signal transduction    
contig04885 novel protein vertebrate oxidation resistance 1 283 20 1.30E-14 95.05% 4 C:nucleolus; P:response to oxidative stress; P:cell wall macromolecule catabolic process; C:mitochondrion    
contig04886 ---NA--- 270 0     0      
contig04887 ---NA--- 539 0     0      
contig04888 ---NA--- 345 0     0      
contig04889 ---NA--- 164 0     0      
contig04890 inhibitor of kappa light polypeptide gene enhancer in b- kinase complex-associated protein like 310 2 2.62E-31 67.50% 0      
contig04891 dihydrouridine synthase 3-like 365 20 2.53E-50 89.80% 5 F:FAD binding; F:nucleic acid binding; F:tRNA dihydrouridine synthase activity; F:zinc ion binding; P:tRNA processing    
contig04892 ---NA--- 274 0     0      
contig04893 ---NA--- 270 0     0      
contig04894 ---NA--- 123 0     0      
contig04895 ch076 protein 278 4 6.96E-16 66.25% 2 P:P; C:C    
contig04896 ubiquitination factor e4b isoform 2 791 20 2.14E-74 95.45% 7 C:cytoplasm; P:apoptosis; F:ubiquitin-protein ligase activity; F:enzyme binding; P:protein ubiquitination during ubiquitin-dependent protein catabolic process; P:response to UV; C:ubiquitin ligase complex EC:6.3.2.19  
contig04897 ---NA--- 171 0     0      
contig04898 ---NA--- 255 0     0      
contig04899 tyrosyl-trna synthetase mitochondrial 676 20 2.15E-105 78.50% 5 P:tyrosyl-tRNA aminoacylation; F:tyrosine-tRNA ligase activity; F:protein binding; F:ATP binding; C:mitochondrion EC:6.1.1.1  
contig04900 alpha-aspartyl dipeptidase 274 20 5.68E-42 88.80% 4 C:cytoplasm; F:dipeptidase E activity; P:proteolysis; F:serine-type endopeptidase activity EC:3.4.13.21; EC:3.4.21.0  
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