Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 4001 - 4100:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig04001 replication factor c 2 414 20 4.36E-10 88.60% 6 P:DNA replication; F:DNA clamp loader activity; C:DNA replication factor C complex; F:protein binding; F:ATP binding; C:nucleus    
contig04002 traf and tnf receptor associated protein 1013 20 1.19E-108 70.25% 4 P:determination of left/right symmetry; F:transcription corepressor activity; P:gastrulation; P:cell surface receptor linked signaling pathway    
contig04003 ---NA--- 221 0     0      
contig04004 subfamily member 3a 1171 20 9.46E-31 90.60% 10 F:small GTPase regulator activity; F:metal ion binding; P:protein folding; P:apoptosis; C:mitochondrial matrix; F:heat shock protein binding; F:unfolded protein binding; C:nucleus; C:cytosol; P:small GTPase mediated signal transduction    
contig04005 acn9 homolog ( cerevisiae) 283 20 5.66E-18 88.05% 2 P:gluconeogenesis; C:mitochondrial intermembrane space    
contig04006 ---NA--- 293 0     0      
contig04007 lrtomt isoform a 783 20 8.39E-31 63.85% 3 P:P; F:protein binding; C:C    
contig04008 mgc83741 protein 389 1 3.46E-15 71.00% 0      
contig04009 ---NA--- 290 0     0      
contig04010 lunapark 404 20 2.49E-45 82.00% 1 C:membrane attack complex    
contig04011 atp gtp binding protein 1 246 20 3.21E-29 86.10% 5 C:cytoplasm; F:carboxypeptidase A activity; P:proteolysis; C:nucleus; F:zinc ion binding EC:3.4.17.1  
contig04012 ---NA--- 118 0     0      
contig04013 ---NA--- 248 0     0      
contig04014 estrogen receptor binding site 9 356 20 7.97E-44 86.75% 9 C:Golgi membrane; C:soluble fraction; C:extracellular space; P:apoptosis; P:regulation of cell growth; F:protein binding; F:apoptotic protease activator activity; C:integral to membrane; C:secretory granule    
contig04015 ---NA--- 249 0     0      
contig04016 prolyl 4- beta polypeptide 617 20 7.28E-107 78.60% 9 F:procollagen-proline 4-dioxygenase activity; C:ER-Golgi intermediate compartment; C:extracellular space; C:cell surface; C:microsome; F:protein binding; P:peptidyl-proline hydroxylation to 4-hydroxy-L-proline; F:isomerase activity; C:endoplasmic reticulum EC:1.14.11.2  
contig04017 apoptosis regulator bcl-x 585 20 1.97E-55 82.20% 6 P:tissue homeostasis; C:nuclear envelope; C:integral to membrane; P:negative regulation of caspase activity; P:negative regulation of apoptosis; C:mitochondrial membrane    
contig04018 ---NA--- 241 0     0      
contig04019 novel protein (zgc:162591) 240 3 5.54E-13 74.33% 0      
contig04020 ---NA--- 646 0     0      
contig04021 ---NA--- 276 0     0      
contig04022 ---NA--- 245 0     0      
contig04023 snai1a protein 361 10 8.79E-27 58.60% 4 F:nucleic acid binding; P:cell migration involved in gastrulation; C:nucleus; F:zinc ion binding    
contig04024 prp18 pre-mrna processing factor 18 homolog 560 20 3.96E-84 90.90% 5 P:RNA splicing; F:potassium channel inhibitor activity; C:spliceosomal complex; C:nuclear speck; P:mRNA processing    
contig04025 mannoside acetylglucosaminyltransferase isoenzyme b 899 20 1.43E-160 91.00% 4 F:metal ion binding; C:Golgi membrane; C:integral to membrane; F:alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase activity EC:2.4.1.155  
contig04026 ---NA--- 295 0     0      
contig04027 coiled-coil domain containing 97 295 2 7.31E-13 75.00% 0      
contig04028 ---NA--- 437 0     0      
contig04029 cytochrome p450 reductase 187 20 2.22E-25 85.15% 7 C:soluble fraction; C:endoplasmic reticulum membrane; C:microsome; F:NADPH-hemoprotein reductase activity; F:iron ion binding; F:FMN binding; P:electron transport EC:1.6.2.4  
contig04030 ---NA--- 340 0     0      
contig04031 necdin-like 2 294 20 2.20E-17 80.85% 5 C:cytoplasm; P:regulation of cell growth; F:protein binding; C:nucleus; P:regulation of transcription, DNA-dependent    
contig04032 ---NA--- 423 0     0      
contig04033 f-box protein 9 351 20 1.08E-40 82.50% 2 F:ubiquitin-protein ligase activity; P:protein ubiquitination EC:6.3.2.19  
contig04034 trm2 trna methyltransferase 2 homolog a ( cerevisiae) 439 20 2.12E-73 85.35% 4 F:nucleic acid binding; P:metabolic process; F:nucleotide binding; F:S-adenosylmethionine-dependent methyltransferase activity    
contig04035 ---NA--- 364 0     0      
contig04036 ---NA--- 259 0     0      
contig04037 sp1 transcription factor 245 20 1.49E-42 95.95% 20 P:positive regulation of transcription from RNA polymerase II promoter, global; P:lung development; P:ossification; F:double-stranded DNA binding; P:embryonic skeletal system development; F:zinc ion binding; P:definitive hemopoiesis; P:enucleate erythrocyte differentiation; P:liver development; F:protein C-terminus binding; P:embryonic process involved in female pregnancy; F:sequence-specific DNA binding; P:embryonic placenta development; F:transcription activator activity; F:transcription factor activity; P:megakaryocyte differentiation; P:trophectodermal cell differentiation; F:protein homodimerization activity; P:embryonic camera-type eye morphogenesis; C:nucleus    
contig04038 ---NA--- 764 0     0      
contig04039 transcriptional adaptor 3 (ngg1 yeast)-like 459 20 2.35E-64 88.30% 4 P:regulation of transcription from RNA polymerase II promoter; F:ligand-dependent nuclear receptor transcription coactivator activity; F:transcription factor activity; C:nucleus    
contig04040 ---NA--- 253 0     0      
contig04041 ---NA--- 460 0     0      
contig04042 ---NA--- 708 0     0      
contig04043 ---NA--- 342 0     0      
contig04044 sumo sentrin specific peptidase family member 8 963 20 1.20E-30 70.10% 3 P:cellular protein metabolic process; F:NEDD8-specific protease activity; F:protein binding    
contig04045 breast cancer 1 258 1 1.26E-12 83.00% 5 P:DNA repair; C:nucleus; F:DNA binding; F:zinc ion binding; F:protein binding    
contig04046 cell division control protein 42 homolog precursor 286 20 2.44E-40 100.00% 0      
contig04047 translocase of inner mitochondrial membrane 22 homolog 467 20 1.87E-08 96.15% 5 P:intracellular protein transmembrane transport; C:mitochondrial inner membrane; F:protein binding; F:protein transporter activity; C:integral to membrane    
contig04048 phosphoglucomutase 1 685 20 5.39E-104 91.75% 5 C:cytoplasm; P:cellular calcium ion homeostasis; P:glucose metabolic process; F:magnesium ion binding; F:phosphoglucomutase activity EC:5.4.2.2  
contig04049 cdc45 cell division cycle 45-like ( cerevisiae) 343 20 1.54E-18 88.55% 4 C:cytoplasm; P:DNA replication checkpoint; F:protein binding; C:nucleus    
contig04050 ---NA--- 372 0     0      
contig04051 bromodomain-containing protein 2 precursor 433 20 2.89E-62 77.10% 2 F:kinase activity; F:F    
contig04052 tar dna binding protein 1028 20 2.57E-143 93.40% 7 P:RNA splicing; F:DNA binding; F:RNA binding; P:mRNA processing; C:nucleus; P:regulation of transcription, DNA-dependent; F:nucleotide binding    
contig04053 ---NA--- 335 0     0      
contig04054 ---NA--- 370 0     0      
contig04055 ---NA--- 260 0     0      
contig04056 exonuclease domain containing 1 333 13 2.12E-14 69.46% 3 C:intracellular; F:binding; F:exonuclease activity    
contig04057 protein kinase c and casein kinase substrate in neurons 2 245 20 2.55E-26 83.90% 8 F:kinase activity; F:cytoskeletal protein binding; P:G-protein coupled receptor protein signaling pathway; C:integral to membrane; C:cytoplasmic vesicle; C:cytosol; P:negative regulation of endocytosis; C:trans-Golgi network    
contig04058 ---NA--- 257 0     0      
contig04059 ---NA--- 246 0     0      
contig04060 rho gtpase activating protein 8 340 20 6.65E-43 87.15% 3 C:intracellular; F:GTPase activator activity; P:signal transduction    
contig04061 ---NA--- 402 0     0      
contig04062 solute carrier family 29 (nucleoside transporters) member isoform cra_a 251 20 6.69E-19 69.55% 3 C:membrane; P:nucleoside transport; F:nucleoside transmembrane transporter activity    
contig04063 ---NA--- 565 0     0      
contig04064 unnamed protein product [Tetraodon nigroviridis] 242 1 1.32E-06 57.00% 0      
contig04065 ---NA--- 303 0     0      
contig04066 oxysterol-binding protein partial 316 2 1.54E-18 81.00% 0      
contig04067 proteasome ( macropain) 26s non- 1 303 20 1.36E-19 87.40% 3 F:protein binding; C:cytosol; C:protein complex    
contig04068 ---NA--- 524 0     0      
contig04069 general transcription factor polypeptide 5 234 20 6.36E-25 70.95% 6 F:RNA polymerase III transcription factor activity; P:tRNA transcription from RNA polymerase III promoter; F:DNA binding; F:protein binding; P:5S class rRNA transcription; C:transcription factor TFIIIC complex    
contig04070 ---NA--- 168 0     0      
contig04071 elongation protein 3 homolog 357 20 2.10E-28 98.40% 15 F:iron-sulfur cluster binding; P:regulation of transcription from RNA polymerase II promoter; C:nucleolus; C:DNA-directed RNA polymerase II, holoenzyme; F:phosphorylase kinase regulator activity; P:cellular iron ion homeostasis; C:transcription elongation factor complex; F:DNA binding; P:iron ion transport; F:protein binding; P:transcription antitermination; F:histone acetyltransferase activity; F:RNA polymerase II transcription elongation factor activity; C:cytoplasm; F:iron ion binding EC:2.3.1.48  
contig04072 ---NA--- 506 0     0      
contig04073 ---NA--- 259 0     0      
contig04074 ---NA--- 252 0     0      
contig04075 ---NA--- 283 0     0      
contig04076 thioredoxin domain containing 9 244 20 3.01E-35 93.70% 0      
contig04077 kinesin family member 16b 348 20 8.60E-38 82.35% 4 P:microtubule-based process; F:ATP binding; C:kinesin complex; F:microtubule motor activity    
contig04078 ---NA--- 390 0     0      
contig04079 g protein pathway suppressor 2 551 19 3.67E-18 61.63% 5 P:inactivation of MAPK activity; P:cell cycle; P:JNK cascade; F:protein binding; F:GTPase inhibitor activity    
contig04080 ---NA--- 586 0     0      
contig04081 ---NA--- 239 0     0      
contig04082 znf211 protein 246 20 9.39E-13 62.30% 7 F:nucleic acid binding; F:metal ion binding; P:regulation of transcription, DNA-dependent; P:zinc ion transport; F:zinc ion binding; C:intracellular; C:nucleus    
contig04083 ankyrin repeat and zinc finger domain containing 1 251 20 3.54E-28 73.55% 2 F:zinc ion binding; F:nucleic acid binding    
contig04084 novel protein 250 20 1.13E-11 68.55% 1 F:hydrolase activity    
contig04085 inhibitor of kappa light polypeptide gene enhancer in b- kinase complex-associated protein like 244 2 5.01E-06 96.00% 0      
contig04086 ---NA--- 367 0     0      
contig04087 phospholipase group xiia 471 20 3.58E-63 87.65% 7 C:Golgi apparatus; F:calcium-dependent phospholipase A2 activity; P:lipid catabolic process; P:phospholipid metabolic process; F:calcium ion binding; C:extracellular region; C:endoplasmic reticulum    
contig04088 sorting nexin 8 251 20 3.90E-35 89.85% 4 P:protein transport; ; F:phosphoinositide binding; F:protein binding    
contig04089 ---NA--- 245 0     0      
contig04090 ---NA--- 263 0     0      
contig04091 origin recognition subunit 3-like 482 20 7.60E-47 73.65% 3 P:DNA replication; C:nuclear origin of replication recognition complex; F:protein binding    
contig04092 ---NA--- 244 0     0      
contig04093 ---NA--- 432 0     0      
contig04094 g protein-coupled receptor 155 241 20 1.27E-33 93.35% 2 C:integral to membrane;    
contig04095 unnamed protein product [Tetraodon nigroviridis] 255 1 5.48E-08 64.00% 0      
contig04096 ---NA--- 263 0     0      
contig04097 ---NA--- 259 0     0      
contig04098 ---NA--- 716 0     0      
contig04099 ---NA--- 250 0     0      
contig04100 solute carrier family 19 (thiamine transporter) member 2 778 20 2.40E-38 78.25% 9 F:thiamin transmembrane transporter activity; F:rhodopsin-like receptor activity; C:plasma membrane; F:folic acid transporter activity; F:folic acid binding; P:thiamin transport; F:reduced folate carrier activity; P:G-protein coupled receptor protein signaling pathway; C:integral to membrane    
100 Rows returned.
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