Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 301 - 400:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig00301 methionyl aminopeptidase 2 1145 20 5.51E-44 97.20% 8 P:cobalt ion transport; F:cobalt ion transmembrane transporter activity; F:cobalt ion binding; P:Wnt receptor signaling pathway; F:methionyl aminopeptidase activity; F:protein binding; P:proteolysis; F:endopeptidase inhibitor activity EC:3.4.11.18  
contig00302 ---NA--- 220 0     0      
contig00303 mgc89011 protein 398 20 1.21E-31 53.05% 3 F:protein kinase activity; F:ATP binding; P:apoptosis    
contig00304 ---NA--- 270 0     0      
contig00305 ---NA--- 345 0     0      
contig00306 ---NA--- 243 0     0      
contig00307 novel protein 1633 20 3.57E-125 65.15% 0      
contig00308 sec13-like partial 282 20 1.39E-24 83.25% 6 C:cytoplasm; C:nuclear pore; P:intracellular protein transmembrane transport; P:mRNA transport; F:calcium ion binding; P:cytoskeleton organization    
contig00309 phd finger protein 5a 478 20 1.06E-56 97.55% 6 C:nucleolus; C:U2 snRNP; P:positive regulation of transcription, DNA-dependent; C:nuclear matrix; F:transcription factor activity; P:nuclear mRNA splicing, via spliceosome    
contig00310 thioredoxin reductase 3 249 20 4.32E-34 88.65% 16 P:spermatogenesis; C:microsome; P:cell differentiation; ; F:thioredoxin-disulfide reductase activity; F:NADP or NADPH binding; F:selenium binding; P:cell redox homeostasis; P:multicellular organismal development; P:glutathione metabolic process; P:electron transport; P:transport; F:FAD binding; C:nucleus; F:protein disulfide oxidoreductase activity; C:endoplasmic reticulum EC:1.6.4.0; EC:1.8.1.9  
contig00311 biphenyl hydrolase-like (serine breast epithelial mucin-associated antigen) 483 20 3.39E-42 80.65% 1 F:hydrolase activity    
contig00312 ---NA--- 1914 0     0      
contig00313 ---NA--- 363 0     0      
contig00314 timeless interacting protein 279 20 6.48E-22 82.65% 10 P:regulation of DNA replication during S phase; C:nuclear chromatin; P:DNA replication checkpoint; P:cell division; P:replication fork protection; P:intra-S DNA damage checkpoint; F:protein binding; P:mitosis; P:positive regulation of cell proliferation; C:cytoplasm    
contig00315 atp-binding sub-family f member 2 1925 20 0 90.70% 5 F:ATPase activity, coupled to transmembrane movement of substances; C:mitochondrial envelope; P:transport; F:ATP binding; C:ATP-binding cassette (ABC) transporter complex    
contig00316 egg envelope component zpc 1402 20 3.60E-83 46.40% 1 C:viral envelope    
contig00317 ---NA--- 295 0     0      
contig00318 mhc class i antigen 259 20 9.93E-18 68.75% 5 F:receptor activity; C:membrane; P:antigen processing and presentation; C:MHC class I protein complex; P:immune response    
contig00319 set domain-containing protein 8 1458 20 8.49E-83 81.55% 9 P:chromatin modification; P:regulation of transcription, DNA-dependent; F:histone-lysine N-methyltransferase activity; P:cell division; F:protein binding; P:mitosis; P:transcription antitermination; C:chromosome; C:nucleus EC:2.1.1.43  
contig00320 ---NA--- 470 0     0      
contig00321 ---NA--- 1632 0     0      
contig00322 myosin light chain kinase 2452 20 0 62.30% 2 F:binding; F:kinase activity    
contig00323 tetratricopeptide repeat domain 9c 1112 20 1.21E-80 67.05% 1 P:protein folding    
contig00324 ---NA--- 302 0     0      
contig00325 qil1 870 20 4.51E-39 72.65% 1 F:protein binding    
contig00326 acyl carrier mitochondrial precursor 724 20 1.93E-68 75.75% 8 P:fatty acid biosynthetic process; F:NADH dehydrogenase (ubiquinone) activity; F:calcium ion binding; C:mitochondrial respiratory chain complex I; F:acyl carrier activity; P:mitochondrial electron transport, NADH to ubiquinone; C:mitochondrial matrix; F:fatty acid binding EC:1.6.5.3  
contig00327 translocase of outer mitochondrial membrane 34 305 20 1.55E-23 81.25% 3 F:protein binding; C:mitochondrion; C:membrane    
contig00328 translocation associated membrane protein 1 578 20 5.52E-87 87.20% 5 P:intracellular protein transmembrane transport; F:receptor activity; C:endoplasmic reticulum membrane; C:membrane attack complex; P:cotranslational protein targeting to membrane    
contig00329 ---NA--- 105 0     0      
contig00330 ---NA--- 328 0     0      
contig00331 spindle pole body component 25 342 20 7.36E-29 65.55% 1 P:cellular process    
contig00332 heterogeneous nuclear ribonucleoprotein a0 644 20 6.28E-91 87.40% 3 F:nucleic acid binding; F:nucleotide binding; C:ribonucleoprotein complex    
contig00333 transcription initiation factor tfiid subunit 9 689 20 1.94E-59 87.70% 9 F:adenylate kinase activity; P:transcription initiation; P:regulation of transcription, DNA-dependent; F:protein C-terminus binding; F:DNA binding; F:ATP binding; F:transcription coactivator activity; C:transcription factor TFIID complex; P:transcription from RNA polymerase II promoter EC:2.7.4.3  
contig00334 ---NA--- 259 0     0      
contig00335 ---NA--- 354 0     0      
contig00336 ---NA--- 280 0     0      
contig00337 ---NA--- 314 0     0      
contig00338 transmembrane protein 49 882 20 4.48E-117 90.65% 4 C:membrane attack complex; C:endoplasmic reticulum; C:ER-Golgi intermediate compartment; C:Golgi apparatus    
contig00339 exosome component 2 597 20 8.74E-62 93.90% 7 C:cytoplasm; F:3'-5'-exoribonuclease activity; F:protein binding; P:rRNA processing; C:exosome (RNase complex); C:nucleus; F:7S RNA binding    
contig00340 overexpressed breast tumor protein homolog 801 20 1.21E-24 89.55% 0      
contig00341 thap domain containing 4 809 20 3.42E-67 83.50% 2 F:zinc ion binding; F:DNA binding    
contig00342 ---NA--- 245 0     0      
contig00343 eukaryotic translation initiation factor subunit e 1451 20 0 97.05% 6 F:translation initiation factor activity; P:camera-type eye development; C:eukaryotic translation initiation factor 3 complex; F:protein binding; P:regulation of translational initiation; P:embryonic viscerocranium morphogenesis    
contig00344 coilin 571 20 1.44E-15 75.25% 5 F:protein C-terminus binding; C:nucleolus; C:Cajal body; F:disulfide oxidoreductase activity; C:female germ cell nucleus    
contig00345 kiaa0776 protein 243 20 2.55E-34 92.25% 1 F:protein binding    
contig00346 leucine-rich ppr-motif containing 1162 20 9.82E-89 60.30% 9 P:cellular process; P:transport; C:cytoskeleton; C:mitochondrion; C:condensed nuclear chromosome; F:actin filament binding; C:perinuclear region of cytoplasm; F:single-stranded DNA binding; F:beta-tubulin binding    
contig00347 aldo-keto reductase family member a1 (aldehyde reductase) 986 20 2.36E-122 87.65% 11 P:D-glucuronate catabolic process; P:aldehyde catabolic process; C:apical plasma membrane; F:electron carrier activity; F:protein binding; F:alcohol dehydrogenase (NADP+) activity; P:glucose metabolic process; P:L-ascorbic acid biosynthetic process; F:L-glucuronate reductase activity; F:aldehyde reductase activity; C:cytosol EC:1.1.1.2; EC:1.1.1.19; EC:1.1.1.21  
contig00348 programmed cell death 4 1109 20 1.07E-28 88.95% 6 P:apoptosis; F:RNA binding; C:cytoplasm; P:negative regulation of cell cycle; C:nucleus; F:protein binding    
contig00349 peroxisomal -enoyl- isomerase 2042 20 1.07E-161 79.50% 4 C:peroxisome; F:acyl-CoA binding; P:fatty acid metabolic process; F:isomerase activity    
contig00350 ---NA--- 278 0     0      
contig00351 cu051 protein 1099 5 6.87E-12 87.80% 0      
contig00352 ---NA--- 296 0     0      
contig00353 ---NA--- 525 0     0      
contig00354 uracil-dna glycosylase 1272 20 3.66E-140 81.45% 9 P:somatic hypermutation of immunoglobulin genes; C:mitochondrion; F:uracil DNA N-glycosylase activity; P:somatic recombination of immunoglobulin gene segments; P:base-excision repair; F:protein binding; P:negative regulation of apoptosis; C:nucleus; F:uridine nucleosidase activity EC:3.2.2.3  
contig00355 tia1 cytotoxic granule-associated rna binding protein 484 20 8.03E-60 85.70% 8 P:negative regulation of cytokine biosynthetic process; P:negative regulation of translation; P:induction of apoptosis; F:poly(A) RNA binding; F:AU-rich element binding; F:nucleotide binding; C:cytoplasm; C:nucleus    
contig00356 chromosome 20 open reading frame 149 595 11 3.10E-19 61.64% 0      
contig00357 rna pseudouridylate synthase domain containing 4 523 20 1.78E-37 78.15% 3 F:RNA binding; P:pseudouridine synthesis; F:pseudouridine synthase activity EC:5.4.99.12  
contig00358 importin 7 894 20 3.93E-110 89.10% 5 C:cytoplasm; C:nuclear pore; P:protein import into nucleus, docking; F:histone binding; F:protein transporter activity    
contig00359 tetraspanin 13 781 20 1.00E-76 81.10% 3 C:membrane attack complex; C:membrane fraction; C:integral to plasma membrane    
contig00360 ---NA--- 819 0     0      
contig00361 dead (asp-glu-ala-asp) box polypeptide y-linked 434 20 4.60E-76 95.80% 6 F:RNA binding; F:ATP binding; C:cytoplasm; C:nucleus; F:DNA binding; F:ATP-dependent helicase activity    
contig00362 loc100003370 protein 568 2 3.16E-07 46.00% 0      
contig00363 ribosomal protein s17 245 20 5.49E-37 98.10% 4 F:structural constituent of ribosome; F:RNA binding; C:cytosolic small ribosomal subunit; P:translation EC:3.6.5.3  
contig00364 thump domain containing 1 534 20 7.84E-68 79.65% 3 F:F; P:P; C:C    
contig00365 ---NA--- 559 0     0      
contig00366 ---NA--- 272 0     0      
contig00367 proteasome ( macropain) 26s non- 13 1503 20 0 91.40% 5 C:cytosol; P:meiosis I; C:proteasome regulatory particle; F:protein binding; F:endopeptidase activity    
contig00368 ---NA--- 945 0     0      
contig00369 ubinuclein 2 214 20 5.69E-10 67.50% 0      
contig00370 ---NA--- 285 0     0      
contig00371 map kinase-interacting serine threonine kinase 2 707 20 1.00E-120 93.45% 9 P:protein amino acid phosphorylation; P:intracellular protein kinase cascade; F:protein binding; F:ATP binding; F:magnesium ion binding; P:regulation of translation; F:zinc ion binding; P:cell surface receptor linked signaling pathway; F:protein serine/threonine kinase activity EC:2.7.11.0  
contig00372 ---NA--- 696 0     0      
contig00373 ---NA--- 275 0     0      
contig00374 ---NA--- 213 0     0      
contig00375 dihydrofolate reductase 711 20 9.01E-39 76.05% 7 F:dihydrofolate reductase activity; P:dihydrofolate metabolic process; P:response to nicotine; P:heart contraction; P:heart morphogenesis; P:tetrahydrofolate biosynthetic process; P:primary metabolic process EC:1.5.1.3  
contig00376 ---NA--- 269 0     0      
contig00377 ---NA--- 268 0     0      
contig00378 ---NA--- 229 0     0      
contig00379 ---NA--- 120 0     0      
contig00380 ---NA--- 778 0     0      
contig00381 sphingomyelin phosphodiesterase acid lysosomal 3206 20 0 73.20% 10 C:lamellar body; P:response to cocaine; P:positive regulation of apoptosis; F:integrase activity; C:extracellular space; F:sphingomyelin phosphodiesterase activity; P:nervous system development; P:signal transduction; P:ceramide biosynthetic process; P:response to drug EC:3.1.4.12  
contig00382 glutamate-rich wd repeat containing 1 252 20 1.21E-39 82.75% 1 C:nucleus    
contig00383 phosphohistidine phosphatase 1 416 20 1.07E-32 80.70% 1 F:hydrolase activity    
contig00384 ---NA--- 497 0     0      
contig00385 nucleoporin 54kda 248 20 2.22E-38 95.30% 5 C:cytoplasm; C:nuclear pore; P:intracellular protein transmembrane transport; C:nucleoplasm; P:mRNA transport    
contig00386 guanine nucleotide binding protein (g protein) beta polypeptide 2-like 1 1078 20 3.00E-121 98.35% 10 C:cytoplasm; F:receptor activity; P:protein localization; C:neuronal cell body; C:heterotrimeric G-protein complex; F:kinase activity; P:activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; F:receptor binding; F:protein kinase C binding; F:GTPase activity EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig00387 plexin domain containing 2 377 20 1.12E-53 87.75% 5 C:integral to membrane; C:extracellular space; P:multicellular organismal development; F:receptor activity; C:plasma membrane    
contig00388 minichromosome maintenance complex component 2 2355 20 0 93.50% 15 P:regulation of DNA replication initiation; F:zinc ion binding; P:cell cycle; C:nuclear origin of replication recognition complex; P:regulation of transcription, DNA-dependent; P:DNA unwinding involved in replication; C:MCM complex; F:ATP binding; F:DNA replication origin binding; C:chromatin; F:protein binding; P:nucleosome assembly; F:DNA-dependent ATPase activity; P:retina development in camera-type eye; F:chromatin binding    
contig00389 upf0139 membrane protein c19orf56 homolog 678 20 1.07E-54 95.80% 1 C:integral to membrane    
contig00390 ---NA--- 313 0     0      
contig00391 loc734098 protein 723 1 5.73E-04 71.00% 0      
contig00392 aspartyl aminopeptidase 1741 8 5.93E-25 83.25% 7 C:vacuole; P:zinc ion transport; F:aspartyl aminopeptidase activity; F:metalloendopeptidase inhibitor activity; P:proteolysis; F:zinc ion binding; F:metallopeptidase activity EC:3.4.11.21  
contig00393 ---NA--- 261 0     0      
contig00394 ---NA--- 248 0     0      
contig00395 ---NA--- 447 0     0      
contig00396 ---NA--- 361 0     0      
contig00397 ankyrin repeat and socs box-containing 12 501 20 1.62E-26 83.05% 2 ; P:ubiquitin cycle    
contig00398 transmembrane and coiled-coil domains 1 245 20 2.03E-15 97.65% 3 C:Golgi membrane; C:integral to membrane; C:endoplasmic reticulum membrane    
contig00399 mediator complex subunit 26 271 20 1.51E-26 80.20% 9 F:translation elongation factor activity; P:RNA elongation; P:regulation of transcription from RNA polymerase II promoter; P:transcription initiation from RNA polymerase II promoter; F:DNA binding; F:RNA polymerase II transcription mediator activity; P:transcription antitermination; ; F:transcription coactivator activity    
contig00400 heat shock protein 90kda member 1 2134 20 0 94.40% 14 P:response to hypoxia; C:sarcoplasmic reticulum; C:cytosol; F:RNA binding; F:calcium ion binding; P:protein folding; C:extracellular space; P:anti-apoptosis; C:melanosome; F:ATP binding; C:endoplasmic reticulum lumen; F:low-density lipoprotein receptor binding; C:perinuclear region of cytoplasm; F:unfolded protein binding    
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