Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 3801 - 3900:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig03801 g protein beta subunit-like 645 20 9.03E-29 97.70% 3 F:F; P:P; C:C    
contig03802 glutaminyl-trna synthetase 612 20 2.64E-109 90.25% 9 F:glutamine-tRNA ligase activity; F:RNA binding; C:aminoacyl-tRNA synthetase multienzyme complex; P:glutamyl-tRNA aminoacylation; P:anti-apoptosis; F:ATP binding; F:protein kinase binding; C:cytoplasm; P:glutaminyl-tRNA aminoacylation EC:6.1.1.18  
contig03803 ---NA--- 183 0     0      
contig03804 zinc finger protein 658 468 20 9.16E-40 58.15% 3 F:nucleic acid binding; P:regulation of transcription; F:transcription repressor activity    
contig03805 heme binding protein 2 840 20 1.72E-72 66.45% 3 F:F; C:cytoplasm; P:P    
contig03806 ---NA--- 244 0     0      
contig03807 charged multivesicular body protein 5 458 13 1.41E-08 95.85% 2 P:transport; C:cytoplasm    
contig03808 novel protein with zinc c3hc4 type (ring finger) and b-box zinc finger domains 873 20 4.03E-104 56.35% 1 F:binding    
contig03809 unnamed protein product [Tetraodon nigroviridis] 243 1 1.27E-09 65.00% 0      
contig03810 coenzyme q5 methyltransferase 255 20 8.17E-12 88.30% 4 F:S-adenosylmethionine-dependent methyltransferase activity; C:extracellular space; P:ubiquinone biosynthetic process; C:mitochondrion    
contig03811 acidic (leucine-rich) nuclear phosphoprotein 32 member e 323 20 2.51E-21 86.50% 7 C:cytoplasmic membrane-bounded vesicle; F:protein binding; P:nucleocytoplasmic transport; C:nuclear matrix; C:endoplasmic reticulum; C:perinuclear region of cytoplasm; F:phosphatase inhibitor activity    
contig03812 splicing arginine serine-rich 5 353 20 1.16E-34 96.40% 2 F:nucleic acid binding; F:nucleotide binding    
contig03813 membrane-associated ring finger 6 293 20 8.06E-36 93.00% 5 C:integral to membrane; P:ubiquitin cycle; F:zinc ion binding; F:protein binding; F:ligase activity    
contig03814 acyl-coenzyme a dehydrogenase member 9 263 20 5.58E-37 87.55% 5 F:FAD binding; P:metabolic process; F:acyl-CoA dehydrogenase activity; C:mitochondrion; P:electron transport EC:1.3.99.3  
contig03815 chromobox homolog 8 818 20 2.88E-53 70.50% 1 C:intracellular organelle    
contig03816 ---NA--- 253 0     0      
contig03817 ---NA--- 947 0     0      
contig03818 ---NA--- 477 0     0      
contig03819 rna (guanine-9-) methyltransferase domain containing 1 248 5 4.22E-05 87.80% 3 F:methyltransferase activity; C:mitochondrion; F:transferase activity    
contig03820 moloney leukemia virus 10-like homolog 1082 20 2.56E-104 75.05% 11 P:spermatogenesis; F:ATP-dependent RNA helicase activity; P:cell proliferation; F:DNA binding; C:intracellular; F:RNA binding; P:muscle organ development; P:germ cell development; F:ATP binding; F:magnesium ion binding; P:negative regulation of cell cycle    
contig03821 coiled-coil domain containing 124 1065 20 5.64E-64 80.65% 0      
contig03822 retinitis pigmentosa 9 protein homolog 785 20 4.26E-67 91.20% 8 P:RNA splicing; P:response to stimulus; F:nucleic acid binding; F:protein binding; C:nuclear speck; P:visual perception; C:signal recognition particle receptor complex; F:zinc ion binding    
contig03823 ---NA--- 342 0     0      
contig03824 ---NA--- 259 0     0      
contig03825 interferon-stimulated 20 kda exonuclease-like 1 477 1 2.40E-08 59.00% 0      
contig03826 ---NA--- 274 0     0      
contig03827 mitochondria-associated granulocyte macrophage csf signaling molecule 646 20 3.20E-34 95.30% 3 P:intracellular protein transmembrane transport; C:mitochondrial inner membrane; C:membrane attack complex    
contig03828 zinc finger protein 451 327 20 9.18E-16 64.30% 13 F:electron carrier activity; C:nucleus; F:DNA binding; F:nucleic acid binding; F:F; F:zinc ion binding; F:iron-sulfur cluster binding; C:C; P:regulation of transcription, DNA-dependent; C:intracellular; F:metal ion binding; P:transcription; P:P    
contig03829 ---NA--- 473 0     0      
contig03830 cytoplasmic dynein 1 heavy chain 1 379 20 1.45E-61 94.75% 10 C:cytoplasm; P:microtubule-based movement; C:dynein complex; F:ATPase activity; F:protein binding; F:ATP binding; F:cysteine-type endopeptidase activity; P:proteolysis; F:microtubule motor activity; C:microtubule EC:3.4.22.0  
contig03831 unnamed protein product [Tetraodon nigroviridis] 442 1 3.31E-05 97.00% 0      
contig03832 ---NA--- 398 0     0      
contig03833 ---NA--- 248 0     0      
contig03834 ---NA--- 513 0     0      
contig03835 ---NA--- 604 0     0      
contig03836 ---NA--- 256 0     0      
contig03837 ---NA--- 727 0     0      
contig03838 ---NA--- 373 0     0      
contig03839 retinol dehydrogenase 12 295 20 1.17E-10 88.40% 2 F:oxidoreductase activity; P:metabolic process    
contig03840 ---NA--- 152 0     0      
contig03841 ---NA--- 210 0     0      
contig03842 ---NA--- 297 0     0      
contig03843 unnamed protein product [Tetraodon nigroviridis] 267 1 3.52E-09 64.00% 0      
contig03844 -like 1 461 20 3.22E-13 91.65% 17 P:chromatin modification; F:DNA helicase activity; C:nuclear matrix; P:DNA recombination; P:regulation of transcription from RNA polymerase II promoter; P:regulation of cell growth; P:spermatogenesis; P:cell division; C:NuA4 histone acetyltransferase complex; F:ATP binding; F:ATPase activity; F:protein binding; P:mitosis; P:transcription antitermination; C:cytoplasm; C:membrane; P:positive regulation of transcription    
contig03845 eukaryotic translation initiation factor subunit c 351 20 6.33E-49 90.10% 4 C:eukaryotic translation initiation factor 3 complex; P:translational initiation; F:translation initiation factor activity; F:ribosome binding    
contig03846 ---NA--- 370 0     0      
contig03847 ---NA--- 394 0     0      
contig03848 ---NA--- 313 0     0      
contig03849 family with sequence similarity member b 680 20 2.14E-71 85.10% 1 C:integral to membrane    
contig03850 elongation factor tu gtp binding domain containing 2 462 20 1.61E-76 95.95% 7 P:RNA splicing; F:translation elongation factor activity; F:GTP binding; C:spliceosomal complex; F:protein binding; P:mRNA processing; F:GTPase activity EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig03851 cold shock domain containing rna-binding 253 20 2.62E-34 79.65% 1 F:nucleic acid binding    
contig03852 ---NA--- 248 0     0      
contig03853 bromodomain containing 7 209 20 3.36E-10 75.55% 5 P:regulation of transcription from RNA polymerase II promoter; F:histone binding; F:latrotoxin receptor activity; F:transcription factor binding; C:membrane    
contig03854 zinc finger protein 37 homolog (zfp-37) 451 2 2.77E-04 75.00% 0      
contig03855 caprin family member 2 362 5 1.15E-10 60.80% 0      
contig03856 clusterin associated protein 1 280 20 7.40E-26 88.30% 2 C:nucleus; F:protein binding    
contig03857 sda1 domain containing 1 657 20 1.20E-76 93.65% 4 C:nucleolus; P:protein transport; F:binding; P:ribosome biogenesis    
contig03858 ---NA--- 271 0     0      
contig03859 exocyst complex component 2 239 20 5.01E-30 91.85% 3 P:protein transport; F:Ral GTPase binding; P:exocytosis    
contig03860 ---NA--- 252 0     0      
contig03861 ---NA--- 566 0     0      
contig03862 chromosome 7 open reading frame 25 441 20 1.42E-56 84.50% 2 F:F; P:P    
contig03863 ---NA--- 481 0     0      
contig03864 actin binding protein anillin 1337 20 7.34E-62 67.90% 2 C:intracellular part; P:cellular process    
contig03865 centrosome and spindle pole associated protein 1 297 20 4.13E-16 67.80% 2 C:centrosome; C:microtubule    
contig03866 ---NA--- 314 0     0      
contig03867 ---NA--- 434 0     0      
contig03868 ---NA--- 265 0     0      
contig03869 ---NA--- 530 0     0      
contig03870 ---NA--- 274 0     0      
contig03871 translocon-associated protein subunit gamma 254 20 7.13E-32 100.00% 4 F:receptor activity; C:integral to endoplasmic reticulum membrane; C:Sec61 translocon complex; P:cotranslational protein targeting to membrane    
contig03872 ---NA--- 336 0     0      
contig03873 lysophospholipase i 373 20 2.44E-24 86.80% 3 P:fatty acid metabolic process; F:lysophospholipase activity; C:mitochondrion EC:3.1.1.5  
contig03874 valosin containing protein 723 20 1.42E-95 97.95% 15 P:proteasomal ubiquitin-dependent protein catabolic process; C:cytosol; P:double-strand break repair; P:protein homooligomerization; F:lipid binding; P:activation of caspase activity; F:ATP binding; C:microsome; F:ATPase activity; F:protein binding; P:ubiquitin cycle; P:retrograde protein transport, ER to cytosol; P:ER to Golgi vesicle-mediated transport; C:endoplasmic reticulum; C:nucleus    
contig03875 casein kinase gamma 2 270 20 1.15E-24 97.60% 5 C:cytoplasm; F:casein kinase activity; P:protein amino acid phosphorylation; P:Wnt receptor signaling pathway; F:ATP binding    
contig03876 ---NA--- 442 0     0      
contig03877 ---NA--- 248 0     0      
contig03878 chromodomain helicase dna binding protein 4 473 20 1.51E-18 57.40% 4 P:cellular process; F:binding; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; F:helicase activity EC:3.6.1.0  
contig03879 ---NA--- 258 0     0      
contig03880 novel protein lim domain 7 ( zgc:152922) 587 3 6.41E-06 51.00% 0      
contig03881 ---NA--- 262 0     0      
contig03882 ---NA--- 446 0     0      
contig03883 ---NA--- 558 0     0      
contig03884 e2f transcription factor 4 270 20 1.05E-11 95.85% 14 P:regulation of cell cycle; C:transcription factor complex; P:organ morphogenesis; P:cilium assembly; P:regulation of cell size; P:regulation of transcription involved in G1/S-phase of mitotic cell cycle; F:protein binding; F:transcription factor activity; P:regulation of cell proliferation; P:transcription antitermination; C:cytoplasm; P:blood circulation; P:epithelial cell development; P:cell volume homeostasis    
contig03885 rab alpha subunit 505 20 1.39E-78 71.45% 4 F:binding; P:visual perception; P:protein amino acid geranylgeranylation; F:Rab geranylgeranyltransferase activity EC:2.5.1.60  
contig03886 ---NA--- 248 0     0      
contig03887 ---NA--- 323 0     0      
contig03888 f-box and leucine-rich repeat protein 18 432 20 5.16E-27 57.10% 3 F:F; P:P; P:ubiquitin cycle    
contig03889 x-ray repair complementing defective repair in chinese hamster cells 6 (ku 70kda) 646 20 2.00E-52 76.70% 5 P:double-strand break repair via nonhomologous end joining; F:nucleic acid binding; F:ATP-dependent DNA helicase activity; P:response to ionizing radiation; C:DNA-dependent protein kinase-DNA ligase 4 complex    
contig03890 replication factor c (activator 1) 5 1118 20 9.70E-179 94.75% 8 P:DNA replication; F:DNA clamp loader activity; C:DNA replication factor C complex; P:retina development in camera-type eye; F:ATP binding; F:enzyme binding; C:nucleus; P:DNA repair    
contig03891 ---NA--- 291 0     0      
contig03892 ---NA--- 280 0     0      
contig03893 ---NA--- 400 0     0      
contig03894 gametogenetin binding protein 2 1044 20 2.85E-113 77.40% 1 P:developmental process    
contig03895 programmed cell death 2 455 20 3.94E-43 61.85% 2 F:metal ion binding; C:intracellular part    
contig03896 ---NA--- 421 0     0      
contig03897 ---NA--- 266 0     0      
contig03898 origin recognition subunit 2-like 1147 20 1.09E-132 60.80% 4 C:chromatin; F:DNA replication origin binding; C:nuclear origin of replication recognition complex; C:inner kinetochore of condensed chromosome    
contig03899 PREDICTED: hypothetical protein [Danio rerio] 393 1 6.27E-04 61.00% 0      
contig03900 ---NA--- 267 0     0      
100 Rows returned.
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