Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 3701 - 3800:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig03701 ---NA--- 295 0     0      
contig03702 protein kinase lyk5 434 20 4.04E-64 76.20% 10 P:protein heterooligomerization; C:protein complex; P:activation of protein kinase activity; F:protein serine/threonine kinase activity; P:protein export from nucleus; F:protein binding; F:nucleotide binding; C:cytoplasm; C:nucleus; P:protein amino acid phosphorylation EC:2.7.11.0  
contig03703 ---NA--- 923 0     0      
contig03704 damage-specific dna binding protein 2 250 20 2.62E-23 84.55% 9 C:protein complex; P:protein autoubiquitination; F:protein binding; P:protein polyubiquitination; F:damaged DNA binding; F:ubiquitin-protein ligase activity; P:nucleotide-excision repair; C:nucleus; P:response to UV EC:6.3.2.19  
contig03705 serine arginine repetitive matrix 1 285 20 4.03E-35 98.15% 6 F:DNA binding; ; C:spliceosomal complex; F:protein binding; C:nuclear matrix; P:nuclear mRNA splicing, via spliceosome    
contig03706 ---NA--- 268 0     0      
contig03707 ---NA--- 154 0     0      
contig03708 ---NA--- 359 0     0      
contig03709 arp3 actin-related protein 3 homolog 130 20 1.41E-16 99.85% 6 F:ATP binding; C:cytoplasm; F:actin binding; C:lamellipodium; C:actin cytoskeleton; F:structural constituent of cytoskeleton    
contig03710 arp3 actin-related protein 3 homolog 412 20 2.08E-44 100.00% 6 F:ATP binding; C:cytoplasm; F:actin binding; C:lamellipodium; C:actin cytoskeleton; F:structural constituent of cytoskeleton    
contig03711 arp3 actin-related protein 3 homolog 574 20 6.05E-62 99.10% 7 C:cytoplasm; F:structural constituent of cytoskeleton; P:cellular component movement; C:Arp2/3 protein complex; C:lamellipodium; F:actin binding; F:ATP binding    
contig03712 dna-damage-inducible transcript 4-like 253 1 3.55E-15 88.00% 0      
contig03713 swi snf matrix actin dependent regulator of subfamily member isoform 2 800 2 4.03E-04 85.00% 0      
contig03714 ---NA--- 416 0     0      
contig03715 ---NA--- 177 0     0      
contig03716 solute carrier family 30 (zinc transporter) member 7 392 20 2.54E-34 86.30% 7 C:Golgi apparatus; C:cytoplasmic membrane-bounded vesicle; F:protein binding; P:zinc ion transport; C:membrane attack complex; F:zinc ion binding; F:zinc ion transmembrane transporter activity    
contig03717 dihydrouridine synthase 4-like 560 20 6.97E-97 90.35% 5 P:tryptophan metabolic process; F:FAD binding; F:indole-3-glycerol-phosphate synthase activity; F:tRNA dihydrouridine synthase activity; P:tRNA processing EC:4.1.1.48  
contig03718 ---NA--- 410 0     0      
contig03719 ---NA--- 259 0     0      
contig03720 progesterone immunomodulatory binding factor 1 231 20 1.38E-11 76.55% 2 F:F; C:C    
contig03721 developmentally regulated gtp binding protein 2 406 20 3.23E-45 97.80% 3 C:cytoplasm; P:signal transduction; F:GTP binding    
contig03722 ---NA--- 548 0     0      
contig03723 ---NA--- 245 0     0      
contig03724 ---NA--- 868 0     0      
contig03725 glycyl-trna synthetase 246 20 8.19E-25 94.20% 6 P:glycyl-tRNA aminoacylation; F:protein binding; P:regulated secretory pathway; F:ATP binding; C:secretory granule; F:glycine-tRNA ligase activity EC:6.1.1.14  
contig03726 ---NA--- 259 0     0      
contig03727 ---NA--- 233 0     0      
contig03728 ---NA--- 258 0     0      
contig03729 PREDICTED: wu:fb39e10 [Danio rerio] 491 1 2.54E-24 80.00% 0      
contig03730 ---NA--- 680 0     0      
contig03731 ---NA--- 280 0     0      
contig03732 eukaryotic translation initiation factor subunit 10 346 20 2.43E-32 96.50% 6 C:eukaryotic translation initiation factor 3 complex; F:protein binding; P:regulation of translational initiation; F:translation initiation factor activity; C:nucleus; F:structural molecule activity    
contig03733 v-ki-ras2 kirsten rat sarcoma viral oncogene homolog 418 20 1.86E-40 100.00% 25 C:membrane raft; F:LRR domain binding; P:positive regulation of nitric-oxide synthase activity; P:positive regulation of NF-kappaB transcription factor activity; P:sensory perception of sound; P:visual learning; P:positive regulation of Rac protein signal transduction; C:membrane fraction; P:regulation of synaptic transmission, GABAergic; P:response to mineralocorticoid stimulus; F:GTP binding; P:striated muscle cell differentiation; P:response to glucocorticoid stimulus; P:negative regulation of neuron apoptosis; P:positive regulation of cell proliferation; C:intracellular; P:positive regulation of MAP kinase activity; P:regulation of cell cycle; F:GMP binding; P:regulation of long-term neuronal synaptic plasticity; P:actin cytoskeleton organization; F:GDP binding; F:GTPase activity; C:plasma membrane; P:cytokine-mediated signaling pathway EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig03734 ---NA--- 255 0     0      
contig03735 ---NA--- 280 0     0      
contig03736 ---NA--- 250 0     0      
contig03737 swi snf matrix actin dependent regulator of subfamily member 1 516 20 6.38E-93 93.65% 12 P:regulation of transcription from RNA polymerase II promoter; C:XY body; P:retroviral genome replication; P:negative regulation of cell proliferation; P:cell differentiation; F:protein binding; P:transcription antitermination; C:SWI/SNF complex; P:blastocyst hatching; P:negative regulation of cell cycle; P:DNA integration; P:chromatin remodeling    
contig03738 wd repeat domain 4-like 265 3 7.08E-08 66.67% 0      
contig03739 ---NA--- 274 0     0      
contig03740 ---NA--- 1131 0     0      
contig03741 rna binding motif protein 28 295 20 1.98E-26 84.10% 3 C:nucleus; F:nucleotide binding; F:RNA binding    
contig03742 ribulose-5-phosphate-3-epimerase 324 20 1.32E-54 94.25% 3 F:protein binding; P:carbohydrate metabolic process; F:ribulose-phosphate 3-epimerase activity EC:5.1.3.1  
contig03743 ---NA--- 261 0     0      
contig03744 ---NA--- 255 0     0      
contig03745 ---NA--- 250 0     0      
contig03746 ---NA--- 692 0     0      
contig03747 unnamed protein product [Tetraodon nigroviridis] 261 1 4.61E-07 64.00% 0      
contig03748 ---NA--- 327 0     0      
contig03749 glycine c-acetyltransferase 848 20 1.28E-99 89.60% 6 F:pyridoxal phosphate binding; C:mitochondrial inner membrane; P:cellular amino acid metabolic process; P:biosynthetic process; F:transferase activity, transferring nitrogenous groups; F:glycine C-acetyltransferase activity EC:2.3.1.29  
contig03750 pb1 protein 329 20 6.75E-43 96.10% 0      
contig03751 ribonuclease h2 subunit c 641 20 5.13E-53 69.65% 2 F:F; C:C    
contig03752 elongation of very long chain fatty acids protein 1 181 2 4.97E-06 75.00% 0      
contig03753 elongation of very long chain fatty acids (fen1 sur4 yeast)-like 1 874 20 1.69E-110 84.90% 4 C:endoplasmic reticulum membrane; P:fatty acid biosynthetic process; F:protein binding; C:integral to membrane    
contig03754 elongation of very long chain fatty acids protein 1 121 10 6.19E-12 79.00% 3 F:F; C:integral to membrane; P:P    
contig03755 ---NA--- 102 0     0      
contig03756 ---NA--- 390 0     0      
contig03757 ---NA--- 764 0     0      
contig03758 ---NA--- 128 0     0      
contig03759 ---NA--- 600 0     0      
contig03760 dead (asp-glu-ala-asp) box polypeptide 53 259 20 1.87E-16 66.90% 3 F:nucleic acid binding; F:hydrolase activity; F:nucleotide binding    
contig03761 homeodomain transcription factor 2 267 20 2.42E-08 100.00% 4 F:DNA binding; C:nucleus; C:endoplasmic reticulum; P:regulation of transcription, DNA-dependent    
contig03762 axin isoform 1 279 20 2.23E-22 99.70% 11 C:beta-catenin destruction complex; P:sensory perception of sound; F:signal transducer activity; C:lateral plasma membrane; F:beta-catenin binding; C:cytoplasmic membrane-bounded vesicle; P:protein catabolic process; P:multicellular organismal development; P:negative regulation of Wnt receptor signaling pathway; C:nucleus; C:synapse    
contig03763 uba and wwe domain containing 1 348 20 3.16E-40 100.00% 8 C:cytoplasm; P:histone ubiquitination; F:DNA binding; F:protein binding; P:protein polyubiquitination; P:mRNA transport; F:ubiquitin-protein ligase activity; C:nucleus EC:6.3.2.19  
contig03764 developmentally regulated gtp binding protein 2 573 20 2.39E-42 95.40% 3 C:cytoplasm; P:signal transduction; F:GTP binding    
contig03765 ---NA--- 280 0     0      
contig03766 cdt1 protein 446 20 2.79E-12 87.20% 6 P:regulation of S phase of mitotic cell cycle; P:DNA replication checkpoint; C:replication fork; F:DNA binding; F:protein binding; C:nucleus    
contig03767 ring finger protein 4 298 2 5.06E-06 83.50% 0      
contig03768 ---NA--- 305 0     0      
contig03769 novel protein mitochondrial translational release factor 1-like 225 3 1.30E-17 79.00% 0      
contig03770 ---NA--- 687 0     0      
contig03771 ---NA--- 250 0     0      
contig03772 ---NA--- 441 0     0      
contig03773 timeless interacting protein 269 20 1.16E-18 56.45% 6 P:negative regulation of DNA replication; P:regulation of S phase; P:DNA-dependent DNA replication; P:DNA integrity checkpoint; C:nucleus; P:response to DNA damage stimulus    
contig03774 ---NA--- 250 0     0      
contig03775 ppig protein 527 20 2.80E-75 94.10% 4 P:protein folding; C:nuclear speck; C:nuclear matrix; F:peptidyl-prolyl cis-trans isomerase activity EC:5.2.1.8  
contig03776 ---NA--- 276 0     0      
contig03777 ---NA--- 247 0     0      
contig03778 ---NA--- 269 0     0      
contig03779 ---NA--- 356 0     0      
contig03780 ---NA--- 360 0     0      
contig03781 ---NA--- 338 0     0      
contig03782 heterogeneous nuclear ribonucleoprotein k 791 20 2.00E-80 76.75% 5 C:nucleoplasm; F:nucleic acid binding; F:protein binding; C:ribonucleoprotein complex; P:RNA processing    
contig03783 delta 1 749 20 3.74E-62 79.70% 12 C:protein complex; C:microtubule; P:spermatogenesis; P:protein polymerization; P:microtubule-based movement; P:cell differentiation; C:centriole; F:GTPase activity; F:structural constituent of cytoskeleton; P:multicellular organismal development; C:nucleus; F:GTP binding EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig03784 damage-specific dna binding protein 127kda 408 20 1.07E-40 98.85% 6 C:cytoplasm; F:protein binding; P:ubiquitin cycle; F:damaged DNA binding; C:nucleus; P:DNA repair    
contig03785 novel protein 806 20 6.41E-66 87.45% 0      
contig03786 f-box protein 43 1064 20 6.28E-23 47.45% 7 F:metal ion binding; F:F; P:P; F:zinc ion binding; P:ubiquitin cycle; P:meiosis; C:C    
contig03787 ---NA--- 366 0     0      
contig03788 adenylosuccinate synthase 351 20 5.02E-43 93.10% 5 C:cytoplasm; F:adenylosuccinate synthase activity; F:GTP binding; P:AMP biosynthetic process; F:magnesium ion binding EC:6.3.4.4  
contig03789 ---NA--- 471 0     0      
contig03790 rna methyltransferase like 1 301 18 4.39E-18 61.67% 2 F:RNA methyltransferase activity; P:RNA processing    
contig03791 ---NA--- 666 0     0      
contig03792 ---NA--- 319 0     0      
contig03793 ---NA--- 443 0     0      
contig03794 ---NA--- 260 0     0      
contig03795 ---NA--- 256 0     0      
contig03796 novel protein 779 20 4.84E-31 78.90% 0      
contig03797 nuclear receptor subfamily group member 1 487 20 1.15E-74 89.65% 9 ; F:sequence-specific DNA binding; F:steroid hormone receptor activity; F:transcription factor activity; F:steroid binding; P:negative regulation of transcription from RNA polymerase II promoter; C:nucleus; F:zinc ion binding; F:transcription repressor activity    
contig03798 unnamed protein product [Tetraodon nigroviridis] 698 1 1.63E-05 98.00% 0      
contig03799 nucleoporin 62kda 241 20 7.73E-15 92.50% 25 P:negative regulation of epidermal growth factor receptor signaling pathway; F:thyroid hormone receptor binding; F:transcription regulator activity; P:positive regulation of transcription; P:mRNA transport; F:PTB domain binding; P:intracellular protein transmembrane transport; P:negative regulation of MAP kinase activity; P:negative regulation of Ras protein signal transduction; F:receptor signaling complex scaffold activity; F:ubiquitin binding; C:cytoplasm; P:negative regulation of cell proliferation; F:SH2 domain binding; F:nucleocytoplasmic transporter activity; C:nuclear pore; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; F:protein serine/threonine kinase activity; P:hormone-mediated signaling pathway; C:nucleocytoplasmic shuttling complex; P:positive regulation of epidermal growth factor receptor signaling pathway; ; F:structural constituent of nuclear pore; F:chromatin binding; P:negative regulation of apoptosis EC:2.7.11.0  
contig03800 insulin-degrading enzyme 234 20 1.16E-34 97.00% 9 C:soluble fraction; C:extracellular space; F:signal transducer activity; C:peroxisome; P:sex differentiation; P:signal transduction; F:insulysin activity; P:proteolysis; F:zinc ion binding EC:3.4.24.56  
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