Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 3501 - 3600:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig03501 rna binding motif protein 10 240 20 3.46E-31 81.95% 4 F:RNA binding; C:nucleus; F:nucleotide binding; F:zinc ion binding    
contig03502 nuclear transcription factor gamma 614 20 3.53E-29 86.70% 3 F:cysteine-type endopeptidase inhibitor activity; C:intracellular; F:sequence-specific DNA binding    
contig03503 ---NA--- 308 0     0      
contig03504 unnamed protein product [Tetraodon nigroviridis] 336 1 7.21E-05 70.00% 0      
contig03505 ---NA--- 529 0     0      
contig03506 antigenic determinant of reca protein homolog 462 20 1.09E-48 88.70% 9 C:cytoplasm; P:DNA replication; F:RNA binding; P:mRNA processing; C:nuclear matrix; F:zinc ion binding; F:double-stranded DNA binding; P:DNA recombination; P:DNA repair    
contig03507 glutamate dehydrogenase 436 20 3.29E-66 93.90% 5 F:glutamate dehydrogenase [NAD(P)+] activity; F:GTP binding; P:cellular amino acid metabolic process; C:mitochondrial matrix; F:ATP binding EC:1.4.1.3  
contig03508 hyaluronoglucosaminidase 4 296 20 8.64E-14 71.95% 2 P:glycosaminoglycan catabolic process; F:hyalurononglucosaminidase activity EC:3.2.1.35  
contig03509 subfamily member 17 363 20 2.55E-26 91.05% 5 P:protein folding; F:RNA binding; F:unfolded protein binding; F:nucleotide binding; F:heat shock protein binding    
contig03510 c18orf32 homolog 372 19 5.24E-27 63.74% 2 P:positive regulation of I-kappaB kinase/NF-kappaB cascade; F:signal transducer activity    
contig03511 ---NA--- 245 0     0      
contig03512 atp5a1 protein 808 20 1.29E-106 96.15% 9 C:proton-transporting ATP synthase complex, catalytic core F(1); F:hydrogen ion transporting ATP synthase activity, rotational mechanism; C:mitochondrial inner membrane; P:ATP synthesis coupled proton transport; F:metal ion binding; C:extracellular space; F:ATP binding; F:protein binding; F:proton-transporting ATPase activity, rotational mechanism EC:3.6.3.14  
contig03513 ---NA--- 402 0     0      
contig03514 ---NA--- 1011 0     0      
contig03515 ---NA--- 250 0     0      
contig03516 novel protein (zgc:174712) 255 20 2.78E-44 64.45% 6 F:metal ion binding; P:zinc ion transport; P:P; F:zinc ion binding; C:nucleus; C:intracellular    
contig03517 sec61 alpha like 1 503 20 2.48E-59 99.05% 5 P:intracellular protein transmembrane transport; C:endoplasmic reticulum membrane; F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity; C:membrane attack complex; P:protein secretion    
contig03518 sec61 alpha like 1 466 20 9.09E-80 98.95% 5 P:intracellular protein transmembrane transport; C:endoplasmic reticulum membrane; F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity; C:membrane attack complex; P:protein secretion    
contig03519 ccr4-not transcription subunit 10 417 20 3.30E-29 78.45% 4 F:F; F:binding; P:P; C:C    
contig03520 prp38 pre-mrna processing factor 38 domain containing a 951 20 1.95E-102 95.10% 4 P:RNA splicing; C:spliceosomal complex; P:mRNA processing; C:integral to membrane    
contig03521 arsa arsenite atp- homolog 1 674 20 6.44E-30 85.70% 8 C:soluble fraction; C:nucleolus; P:anion transport; F:arsenite transmembrane-transporting ATPase activity; F:ATP binding; P:response to arsenic; C:cytoplasm; C:membrane EC:3.6.3.16  
contig03522 ---NA--- 257 0     0      
contig03523 ---NA--- 350 0     0      
contig03524 ring finger protein 219 678 20 3.51E-82 77.35% 1 F:metal ion binding    
contig03525 ---NA--- 233 0     0      
contig03526 ras association ( af-6) domain family 1 205 20 4.87E-09 89.25% 2 F:protein binding; P:signal transduction    
contig03527 eukaryotic translation initiation factor 6 1129 20 3.78E-122 96.45% 8 C:cytoplasm; P:mature ribosome assembly; P:integrin-mediated signaling pathway; F:protein binding; F:translation initiation factor activity; C:nucleus; P:translation; F:ribosome binding EC:3.6.5.3  
contig03528 secretory carrier membrane protein 2 1694 20 2.28E-16 82.40% 5 C:synaptic vesicle membrane; P:exocytosis; C:integral to membrane; C:zymogen granule membrane; P:protein transport    
contig03529 ---NA--- 265 0     0      
contig03530 coiled-coil domain containing 28a 600 20 7.06E-43 90.65% 2 F:F; P:P    
contig03531 phosphoinositide-3- regulatory subunit 1 (p85 alpha) 170 20 5.93E-15 96.95% 0      
contig03532 ligase atp-dependent 294 20 1.38E-11 84.50% 11 P:DNA repair; F:zinc ion binding; F:DNA ligase (ATP) activity; P:reciprocal meiotic recombination; P:DNA replication; P:spermatogenesis; P:cell division; F:DNA binding; F:ATP binding; P:V(D)J recombination; C:nucleus EC:6.5.1.1  
contig03533 mitochondrial ribosomal protein l14 711 20 3.08E-63 85.25% 5 C:extracellular space; C:mitochondrial ribosome; P:ribosome biogenesis; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig03534 ---NA--- 425 0     0      
contig03535 ---NA--- 591 0     0      
contig03536 ---NA--- 258 0     0      
contig03537 odr4 homolog 357 11 1.73E-14 55.45% 6 F:metal ion binding; F:oxidoreductase activity; P:zinc ion transport; C:membrane; F:zinc ion binding; C:C    
contig03538 sumo1 sentrin specific peptidase 6 279 20 1.35E-11 60.25% 4 P:proteolysis; F:cysteine-type peptidase activity; P:ubiquitin cycle; C:nucleus    
contig03539 ---NA--- 341 0     0      
contig03540 n-acetylglucosamine-1-phosphate gamma subunit 701 20 5.74E-83 81.05% 4 F:transferase activity; F:protein binding; C:membrane; C:Golgi apparatus    
contig03541 general transcription factor polypeptide 30kda 502 20 3.72E-47 92.05% 9 P:transcription initiation from RNA polymerase II promoter; P:positive regulation of transcription from RNA polymerase II promoter; F:DNA binding; F:ATP binding; F:protein binding; C:transcription factor TFIIF complex; F:helicase activity; F:hydrolase activity; F:RNA polymerase II transcription factor activity    
contig03542 ---NA--- 253 0     0      
contig03543 ---NA--- 107 0     0      
contig03544 dehydrogenase reductase (sdr family) x-linked 807 1 3.98E-07 64.00% 0      
contig03545 ---NA--- 309 0     0      
contig03546 abl-interactor 1 258 20 7.60E-18 87.55% 11 C:cytoplasm; C:cytoskeleton; F:protein tyrosine kinase activator activity; C:lamellipodium; C:synaptosome; C:cell junction; F:protein binding; P:peptidyl-tyrosine phosphorylation; C:nucleus; P:somitogenesis; C:synapse    
contig03547 general transcription factor polypeptide 62kda 345 20 1.86E-40 85.10% 8 P:DNA repair; P:positive regulation of transcription from RNA polymerase II promoter; F:RNA polymerase II carboxy-terminal domain kinase activity; F:general RNA polymerase II transcription factor activity; F:protein binding; F:transcription factor activity; C:holo TFIIH complex; P:regulation of cyclin-dependent protein kinase activity EC:2.7.11.23  
contig03548 ---NA--- 266 0     0      
contig03549 phd finger protein 16 398 20 1.92E-45 95.00% 3 P:zinc ion transport; F:zinc ion binding; F:protein binding    
contig03550 rad51-associated protein 1 576 20 1.10E-26 48.90% 1 F:DNA binding    
contig03551 ubiquitin protein ligase e3 component n-recognin 5 251 20 3.09E-40 95.45% 5 P:ubiquitin cycle; F:ubiquitin-protein ligase activity; P:mRNA metabolic process; C:nucleus; F:zinc ion binding EC:6.3.2.19  
contig03552 ---NA--- 293 0     0      
contig03553 ---NA--- 379 0     0      
contig03554 ---NA--- 259 0     0      
contig03555 inositol -1(or 4)-monophosphatase 1 375 20 3.15E-40 83.40% 10 C:cytoplasm; P:carbohydrate metabolic process; F:nucleic acid binding; F:lithium ion binding; F:magnesium ion binding; P:phosphatidylinositol biosynthetic process; P:signal transduction; F:inositol-1(or 4)-monophosphatase activity; F:zinc ion binding; P:phosphate metabolic process EC:3.1.3.25  
contig03556 ---NA--- 271 0     0      
contig03557 arp3 actin-related protein 3 homolog 438 20 5.40E-69 99.45% 7 C:cytoplasm; F:structural constituent of cytoskeleton; P:cellular component movement; C:Arp2/3 protein complex; C:lamellipodium; F:actin binding; F:ATP binding    
contig03558 zinc finger protein 451 302 20 1.96E-34 63.95% 1 F:binding    
contig03559 ---NA--- 335 0     0      
contig03560 ---NA--- 302 0     0      
contig03561 ribosomal protein l22 462 20 3.18E-40 99.65% 6 F:heparin binding; P:ribosome biogenesis; F:structural constituent of ribosome; F:RNA binding; C:cytosolic large ribosomal subunit; P:translation EC:3.6.5.3  
contig03562 ---NA--- 465 0     0      
contig03563 mitochondrial import inner membrane translocase subunit tim13 389 20 2.63E-39 94.45% 9 F:zinc ion binding; P:zinc ion transport; F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity; C:mitochondrial inner membrane presequence translocase complex; P:protein import into mitochondrial inner membrane; C:mitochondrial intermembrane space protein transporter complex; C:membrane attack complex; P:intracellular protein transmembrane transport; P:sensory perception of sound    
contig03564 ---NA--- 294 0     0      
contig03565 chromosome 18 open reading frame 8 250 20 3.09E-40 90.20% 2 F:F; P:P    
contig03566 succinate dehydrogenase iron-sulfur mitochondrial precursor 317 20 5.63E-29 92.50% 7 P:cellular iron ion homeostasis; F:electron carrier activity; F:iron ion binding; P:electron transport; P:tricarboxylic acid cycle; F:2 iron, 2 sulfur cluster binding; P:iron ion transport    
contig03567 unnamed protein product [Tetraodon nigroviridis] 247 1 1.45E-13 85.00% 0      
contig03568 progesterone receptor membrane component 2 731 20 1.91E-55 92.95% 6 F:heme binding; C:integral to membrane; F:transition metal ion binding; F:steroid hormone receptor activity; F:protein binding; F:steroid binding    
contig03569 ---NA--- 141 0     0      
contig03570 heat shock protein 90kda member 1 658 20 1.73E-83 93.65% 14 P:response to hypoxia; C:sarcoplasmic reticulum; C:cytosol; F:RNA binding; F:calcium ion binding; P:protein folding; C:extracellular space; P:anti-apoptosis; C:melanosome; F:ATP binding; C:endoplasmic reticulum lumen; F:low-density lipoprotein receptor binding; C:perinuclear region of cytoplasm; F:unfolded protein binding    
contig03571 nudix-type motif 4 681 20 4.43E-08 91.45% 7 F:metal ion binding; C:cytoplasm; F:magnesium ion binding; F:hydrolase activity; F:diphosphoinositol-polyphosphate diphosphatase activity; F:manganese ion binding; P:phosphoinositide metabolic process    
contig03572 ---NA--- 276 0     0      
contig03573 ornithine decarboxylase antizyme 682 20 1.59E-82 72.70% 2 P:polyamine biosynthetic process; F:ornithine decarboxylase inhibitor activity    
contig03574 phosphatidylinositol 4- beta 187 20 1.09E-21 98.60% 7 F:binding; P:phosphoinositide phosphorylation; F:obs-phosphatidylinositol 4-kinase activity; P:phosphoinositide-mediated signaling; C:membrane; C:endoplasmic reticulum; C:mitochondrion EC:2.7.1.67  
contig03575 minichromosome maintenance complex component 3 719 20 2.67E-38 65.80% 4 F:binding; P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; ; P:retina development in camera-type eye    
contig03576 malate cytoplasmic 1885 20 9.09E-176 93.05% 7 C:cytoplasm; F:binding; F:L-malate dehydrogenase activity; P:malate metabolic process; P:tricarboxylic acid cycle intermediate metabolic process; P:tricarboxylic acid cycle; P:glycolysis EC:1.1.1.37  
contig03577 ---NA--- 247 0     0      
contig03578 ---NA--- 779 0     0      
contig03579 ---NA--- 266 0     0      
contig03580 ---NA--- 254 0     0      
contig03581 ---NA--- 288 0     0      
contig03582 phospholipase a2-activating protein 280 20 4.62E-36 90.75% 4 P:signal transduction; F:binding; F:phospholipase A2 activator activity; P:phospholipid metabolic process    
contig03583 ---NA--- 681 0     0      
contig03584 expressed sequence dq017643 290 1 3.78E-09 63.00% 0      
contig03585 isoform cra_a 626 20 5.34E-44 65.65% 4 C:cytoplasm; P:P; F:DNA binding; C:nucleus    
contig03586 ---NA--- 224 0     0      
contig03587 ---NA--- 484 0     0      
contig03588 wdyhv motif containing 1 473 20 3.59E-28 73.55% 0      
contig03589 ---NA--- 427 0     0      
contig03590 ---NA--- 253 0     0      
contig03591 atg3 autophagy related 3 homolog ( cerevisiae) 243 20 4.20E-37 90.70% 7 P:protein ubiquitination; F:enzyme binding; C:cytoplasmic ubiquitin ligase complex; C:cytosol; F:small conjugating protein ligase activity; P:autophagy; P:protein transport    
contig03592 ---NA--- 502 0     0      
contig03593 ---NA--- 252 0     0      
contig03594 hydroxyacyl-coenzyme a dehydrogenase 3-ketoacyl-coenzyme a thiolase enoyl-coenzyme a hydratase (trifunctional protein) beta subunit 415 20 8.93E-64 91.25% 3 C:mitochondrial matrix; P:fatty acid metabolic process; F:acetyl-CoA C-acyltransferase activity EC:2.3.1.16  
contig03595 atpase aaa domain containing 3a 343 20 2.88E-41 93.10% 4 C:mitochondrial inner membrane; F:protein binding; F:ATP binding; F:nucleoside-triphosphatase activity EC:3.6.1.15  
contig03596 riken cdna 1200011m11 gene 402 20 6.16E-20 69.70% 0      
contig03597 ---NA--- 182 0     0      
contig03598 mitochondrial ribosomal protein l38 1159 20 0 75.25% 1 C:mitochondrial ribosome    
contig03599 golgi snap receptor complex member 1 825 20 7.86E-115 91.85% 10 C:Golgi membrane; P:intra-Golgi vesicle-mediated transport; F:SNAP receptor activity; C:Golgi trans cisterna; C:SNARE complex; P:retrograde transport, endosome to Golgi; P:intracellular protein transport; C:integral to membrane; C:cis-Golgi network; P:ER to Golgi vesicle-mediated transport    
contig03600 ---NA--- 261 0     0      
100 Rows returned.
Go to records:
1-100, 101-200, 201-300, 301-400, 401-500, 501-600, 601-700, 701-800, 801-900, 901-1000, 1001-1100, 1101-1200, 1201-1300, 1301-1400, 1401-1500, 1501-1600, 1601-1700, 1701-1800, 1801-1900, 1901-2000, 2001-2100, 2101-2200, 2201-2300, 2301-2400, 2401-2500, 2501-2600, 2601-2700, 2701-2800, 2801-2900, 2901-3000, 3001-3100, 3101-3200, 3201-3300, 3301-3400, 3401-3500, 3501-3600, 3601-3700, 3701-3800, 3801-3900, 3901-4000, 4001-4100, 4101-4200, 4201-4300, 4301-4400, 4401-4500, 4501-4600, 4601-4700, 4701-4800, 4801-4900, 4901-5000, 5001-5100, 5101-5200, 5201-5300, 5301-5400, 5401-5500, 5501-5600, 5601-5700, 5701-5800, 5801-5900, 5901-6000, 6001-6100, 6101-6200, 6201-6300, 6301-6400, 6401-6500, 6501-6600, 6601-6700, 6701-6800, 6801-6900, 6901-7000, 7001-7100, 7101-7200, 7201-7300, 7301-7400, 7401-7500, 7501-7600, 7601-7700, 7701-7800, 7801-7900, 7901-8000, 8001-8100, 8101-8200, 8201-8300, 8301-8400, 8401-8500, 8501-8600, 8601-8700, 8701-8800, 8801-8900, 8901-9000, 9001-9100, 9101-9200, 9201-9300, 9301-9400, 9401-9500, 9501-9600, 9601-9700, 9701-9800, 9801-9900, 9901-10000, 10001-10100, 10101-10200, 10201-10300, 10301-10400, 10401-10500, 10501-10600, 10601-10700, 10701-10800, 10801-10900, 10901-11000, 11001-11100, 11101-11200, 11201-11208
Web Access Statistics © 2003-2025 NAGRP - Bioinformatics Coordination Program.
Contact: NAGRP Bioinformatics Team 		Helpdesk