Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 3401 - 3500:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig03401 cdc5 cell division cycle 5-like 323 20 9.17E-48 99.40% 9 P:RNA splicing; F:DNA binding; C:spliceosomal complex; F:RNA binding; P:cell cycle; P:mRNA processing; P:protein targeting; P:regulation of transcription, DNA-dependent; P:cell division    
contig03402 cdc45 cell division cycle 45-like ( cerevisiae) 913 20 1.83E-102 91.75% 4 C:cytoplasm; P:DNA replication checkpoint; F:protein binding; C:nucleus    
contig03403 dynactin 4 368 20 2.20E-54 94.25% 4 F:protein N-terminus binding; C:cytoplasmic dynein complex; C:centrosome; C:nucleus    
contig03404 ring finger protein 121 246 20 5.31E-24 75.00% 2 F:metal ion binding; C:membrane    
contig03405 ---NA--- 345 0     0      
contig03406 ---NA--- 805 0     0      
contig03407 chromosome 15 open reading frame 24 478 20 2.90E-46 88.85% 5 F:purine nucleotide binding; C:integral to membrane; C:extracellular space; C:cytoplasm; F:carbohydrate binding    
contig03408 adp-ribosylation factor-like 1 285 20 7.62E-26 100.00% 8 F:enzyme activator activity; P:Golgi vesicle transport; F:GTP binding; P:Golgi organization; F:protein binding; C:trans-Golgi network; P:small GTPase mediated signal transduction; F:GTPase activity EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig03409 acetyl propionyl beta subunit 240 9 4.10E-16 80.89% 1 F:ligase activity    
contig03410 mediator complex subunit 16 338 20 4.51E-15 92.85% 3 F:receptor activity; ; P:transcription from RNA polymerase II promoter    
contig03411 ---NA--- 269 0     0      
contig03412 ---NA--- 292 0     0      
contig03413 subfamily member 21 466 20 2.04E-47 80.55% 5 F:nucleic acid binding; C:intracellular; P:zinc ion transport; F:heat shock protein binding; F:zinc ion binding    
contig03414 ---NA--- 191 0     0      
contig03415 taf5 rna polymerase tata box binding protein -associated factor 265 20 5.75E-34 96.10% 8 P:chromatin modification; P:transcription initiation from RNA polymerase II promoter; C:nucleolus; P:regulation of transcription, DNA-dependent; F:protein dimerization activity; F:transcription factor activity; F:histone acetyltransferase activity; C:transcription factor TFIID complex EC:2.3.1.48  
contig03416 ---NA--- 274 0     0      
contig03417 phenylalanyl-trna beta subunit 719 20 5.13E-90 88.05% 5 C:cytoplasm; F:phenylalanine-tRNA ligase activity; F:RNA binding; F:ATP binding; P:phenylalanyl-tRNA aminoacylation EC:6.1.1.20  
contig03418 ---NA--- 214 0     0      
contig03419 ---NA--- 102 0     0      
contig03420 novel protein (zgc:153989) 250 20 2.37E-24 86.45% 1 C:mitochondrion    
contig03421 mps one binder kinase activator-like 1a 988 20 4.75E-22 98.20% 5 F:kinase activity; C:cytoplasm; C:nucleus; F:zinc ion binding; F:protein binding    
contig03422 ---NA--- 354 0     0      
contig03423 kinetochore homolog 167 20 4.12E-16 82.40% 5 C:kinetochore; F:protein binding; P:mitosis; P:mitotic cell cycle checkpoint; P:cell division    
contig03424 ---NA--- 359 0     0      
contig03425 ---NA--- 280 0     0      
contig03426 ---NA--- 354 0     0      
contig03427 methyltransferase like 8 431 20 3.60E-12 79.55% 1 F:methyltransferase activity EC:2.1.1.0  
contig03428 cdna sequence bc003266 348 16 5.78E-26 82.31% 2 P:P; C:C    
contig03429 sorting nexin 22 291 7 5.08E-14 84.29% 3 F:phosphoinositide binding; F:protein binding; P:cell communication    
contig03430 apg16 autophagy 16-like isoform 6 546 20 7.86E-90 98.05% 4 P:protein transport; C:pre-autophagosomal structure membrane; P:autophagy; F:protein binding    
contig03431 ---NA--- 244 0     0      
contig03432 coiled-coil-helix-coiled-coil-helix domain containing 1 476 20 2.25E-22 66.45% 4 F:F; P:P; C:nucleus; C:C    
contig03433 parathyroid hormone-like hormone 1156 20 5.09E-29 63.90% 19 P:epithelial cell differentiation; P:cAMP metabolic process; P:skeletal system development; P:negative regulation of cell proliferation; P:positive regulation of cell proliferation; P:surfactant homeostasis; C:nucleus; P:cell-cell signaling; P:activation of adenylate cyclase activity by G-protein signaling pathway; P:epidermis development; C:extracellular space; F:calcium ion binding; P:lung alveolus development; F:hormone activity; C:cytoplasm; P:osteoblast development; P:female pregnancy; C:extracellular region; P:lactation    
contig03434 activating transcription factor 7 interacting protein 272 2 4.26E-05 75.00% 5 P:regulation of transcription, DNA-dependent; P:transcription termination; P:transcription; P:transcription antitermination; C:nucleus    
contig03435 unc-45 homolog a 136 7 1.11E-05 83.00% 9 P:skeletal muscle tissue development; C:nucleus; C:cytoplasm; P:multicellular organismal development; P:cell differentiation; C:C; F:protein binding; P:P; F:binding    
contig03436 ---NA--- 335 0     0      
contig03437 glycosyltransferase 8 domain containing 1 274 20 5.69E-34 82.70% 3 C:membrane attack complex; P:carbohydrate biosynthetic process; F:transferase activity, transferring hexosyl groups EC:2.4.1.0  
contig03438 dihydrolipoamide s-succinyltransferase (e2 component of 2-oxo-glutarate complex) 1286 20 1.05E-126 90.20% 6 C:oxoglutarate dehydrogenase complex; F:dihydrolipoyllysine-residue succinyltransferase activity; F:protein binding; P:tricarboxylic acid cycle; F:lipoic acid binding; C:mitochondrion EC:2.3.1.61  
contig03439 ---NA--- 338 0     0      
contig03440 ---NA--- 287 0     0      
contig03441 ---NA--- 260 0     0      
contig03442 peptidoglycan recognition protein 986 20 1.90E-55 69.00% 3 P:defense response to bacterium; F:binding; F:N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28  
contig03443 ---NA--- 255 0     0      
contig03444 ---NA--- 398 0     0      
contig03445 ---NA--- 302 0     0      
contig03446 ---NA--- 716 0     0      
contig03447 wd repeat domain 40a 356 20 1.04E-43 90.60% 2 P:P; C:C    
contig03448 ---NA--- 252 0     0      
contig03449 integral membrane protein 1 614 20 1.42E-62 100.00% 6 C:extracellular space; C:membrane fraction; P:protein amino acid glycosylation; C:integral to membrane; F:dolichyl-diphosphooligosaccharide-protein glycotransferase activity; C:endoplasmic reticulum EC:2.4.1.119  
contig03450 nuclear vcp-like 363 20 6.93E-24 83.05% 3 F:nucleoside-triphosphatase activity; F:ATP binding; C:nucleus EC:3.6.1.15  
contig03451 ring finger protein 32 669 20 1.65E-52 59.20% 2 C:endosome; C:aggresome    
contig03452 ring finger protein 7 754 20 6.49E-62 95.50% 12 F:copper ion binding; P:induction of apoptosis by oxidative stress; F:zinc ion binding; P:zinc ion transport; ; P:anti-apoptosis; P:activation of caspase activity; P:apoptotic mitochondrial changes; F:protein binding; P:ubiquitin cycle; C:cytoplasm; C:nucleus    
contig03453 small inducible cytokine subfamily member 1 378 20 5.74E-34 80.85% 11 P:negative regulation of endothelial cell proliferation; C:aminoacyl-tRNA synthetase multienzyme complex; P:cell-cell signaling; P:inflammatory response; P:negative regulation of angiogenesis; F:cytokine activity; P:leukocyte migration; F:cell surface binding; F:tRNA binding; F:protein homodimerization activity; P:defense response to virus    
contig03454 ---NA--- 258 0     0      
contig03455 ---NA--- 285 0     0      
contig03456 exosomal core protein csl4 577 20 5.64E-41 89.65% 6 C:nucleolus; F:exonuclease activity; F:RNA binding; F:protein binding; P:rRNA processing; C:exosome (RNase complex)    
contig03457 wd repeat domain 4-like 259 3 9.59E-21 67.00% 0      
contig03458 sfrs protein kinase 1 761 20 4.88E-65 69.85% 11 F:protein serine/threonine kinase activity; P:intracellular protein kinase cascade; P:regulation of mRNA processing; P:chromosome segregation; P:RNA splicing; F:ATP binding; F:protein binding; F:magnesium ion binding; C:cytoplasm; C:nucleus; P:protein amino acid phosphorylation EC:2.7.11.0  
contig03459 down syndrome critical region gene 3 317 20 2.14E-28 89.65% 3 C:retromer complex; C:nucleus; P:vacuolar transport    
contig03460 ---NA--- 401 0     0      
contig03461 haus augmin-like subunit 4 259 3 1.43E-16 82.33% 2 F:F; C:C    
contig03462 ---NA--- 263 0     0      
contig03463 alpha 391 20 7.84E-52 98.95% 8 C:cytoplasm; C:cytoskeleton; P:actin cytoskeleton organization; C:lamellipodium; F:actin binding; C:focal adhesion; P:cell adhesion; C:nucleus    
contig03464 ---NA--- 371 0     0      
contig03465 ---NA--- 531 0     0      
contig03466 phosphoglucomutase 1 904 20 4.51E-97 87.85% 5 C:cytoplasm; P:cellular calcium ion homeostasis; P:glucose metabolic process; F:magnesium ion binding; F:phosphoglucomutase activity EC:5.4.2.2  
contig03467 vacuolar protein sorting-associated protein 29 591 20 3.66E-89 99.15% 6 C:endosome; P:Golgi to vacuole transport; C:membrane; F:zinc ion binding; F:phosphoserine phosphatase activity; P:protein transport EC:3.1.3.3  
contig03468 ---NA--- 276 0     0      
contig03469 ---NA--- 156 0     0      
contig03470 ---NA--- 322 0     0      
contig03471 ---NA--- 232 0     0      
contig03472 meckel type 1 245 20 3.45E-23 69.90% 2 P:P; C:C    
contig03473 janus kinase and microtubule interacting protein 1 573 20 7.92E-54 75.90% 5 F:GABA receptor binding; F:RNA binding; P:transport; C:peripheral to membrane of membrane fraction; C:ribonucleoprotein complex    
contig03474 ---NA--- 450 0     0      
contig03475 ---NA--- 305 0     0      
contig03476 enoyl coenzyme a short mitochondrial 452 20 2.11E-20 94.60% 5 F:protein binding; F:long-chain-enoyl-CoA hydratase activity; C:mitochondrial matrix; P:fatty acid beta-oxidation; F:enoyl-CoA hydratase activity EC:4.2.1.74; EC:4.2.1.17  
contig03477 ---NA--- 264 0     0      
contig03478 uridine-cytidine kinase 1 507 20 1.21E-61 84.05% 4 F:uridine kinase activity; P:metabolic process; F:ATP binding; F:phosphotransferase activity, alcohol group as acceptor EC:2.7.1.48; EC:2.7.1.0  
contig03479 ---NA--- 271 0     0      
contig03480 ---NA--- 324 0     0      
contig03481 ---NA--- 298 0     0      
contig03482 ---NA--- 309 0     0      
contig03483 ---NA--- 261 0     0      
contig03484 chromosome 9 open reading frame 156 895 20 2.34E-54 68.20% 3 F:hydrolase activity; P:P; C:C    
contig03485 ewing sarcoma breakpoint region 1b 1135 20 7.85E-43 86.70% 7 C:cytoplasm; C:Cajal body; F:nucleic acid binding; P:mitosis; P:central nervous system neuron development; F:zinc ion binding; F:nucleotide binding    
contig03486 unnamed protein product [Tetraodon nigroviridis] 324 3 7.51E-10 72.67% 0      
contig03487 ---NA--- 784 0     0      
contig03488 membrane-associated ring finger 6 334 20 2.02E-39 76.55% 3 F:metal ion binding; C:integral to membrane; C:endoplasmic reticulum    
contig03489 kiaa0528 protein 252 20 1.70E-25 80.75% 0      
contig03490 ---NA--- 276 0     0      
contig03491 ---NA--- 475 0     0      
contig03492 ---NA--- 650 0     0      
contig03493 insulin-degrading enzyme 333 20 4.48E-47 96.45% 9 C:soluble fraction; C:extracellular space; F:signal transducer activity; C:peroxisome; P:sex differentiation; P:signal transduction; F:insulysin activity; P:proteolysis; F:zinc ion binding EC:3.4.24.56  
contig03494 fatty aldehyde dehydrogenase 362 20 1.03E-51 84.00% 10 F:3-chloroallyl aldehyde dehydrogenase activity; C:endoplasmic reticulum membrane; P:lipid metabolic process; P:central nervous system development; F:aldehyde dehydrogenase [NAD(P)+] activity; F:aldehyde dehydrogenase (NAD) activity; P:epidermis development; C:integral to membrane; P:peripheral nervous system development; P:cellular aldehyde metabolic process EC:1.2.1.5; EC:1.2.1.3  
contig03495 ---NA--- 438 0     0      
contig03496 acidic (leucine-rich) nuclear phosphoprotein 32 member b 551 20 1.88E-14 97.00% 5 P:nucleocytoplasmic transport; C:endoplasmic reticulum; C:perinuclear region of cytoplasm; C:nucleus; F:protein binding    
contig03497 ring finger protein 38 246 20 6.90E-40 94.40% 2 F:zinc ion binding; F:protein binding    
contig03498 ---NA--- 251 0     0      
contig03499 unnamed protein product [Tetraodon nigroviridis] 491 1 4.74E-04 60.00% 0      
contig03500 actin related protein 2 3 complex subunit 2 126 20 1.42E-16 97.30% 7 C:cytoplasm; P:cellular component movement; F:structural constituent of cytoskeleton; C:Arp2/3 protein complex; P:regulation of actin filament polymerization; F:actin binding; C:cell projection    
100 Rows returned.
Go to records:
1-100, 101-200, 201-300, 301-400, 401-500, 501-600, 601-700, 701-800, 801-900, 901-1000, 1001-1100, 1101-1200, 1201-1300, 1301-1400, 1401-1500, 1501-1600, 1601-1700, 1701-1800, 1801-1900, 1901-2000, 2001-2100, 2101-2200, 2201-2300, 2301-2400, 2401-2500, 2501-2600, 2601-2700, 2701-2800, 2801-2900, 2901-3000, 3001-3100, 3101-3200, 3201-3300, 3301-3400, 3401-3500, 3501-3600, 3601-3700, 3701-3800, 3801-3900, 3901-4000, 4001-4100, 4101-4200, 4201-4300, 4301-4400, 4401-4500, 4501-4600, 4601-4700, 4701-4800, 4801-4900, 4901-5000, 5001-5100, 5101-5200, 5201-5300, 5301-5400, 5401-5500, 5501-5600, 5601-5700, 5701-5800, 5801-5900, 5901-6000, 6001-6100, 6101-6200, 6201-6300, 6301-6400, 6401-6500, 6501-6600, 6601-6700, 6701-6800, 6801-6900, 6901-7000, 7001-7100, 7101-7200, 7201-7300, 7301-7400, 7401-7500, 7501-7600, 7601-7700, 7701-7800, 7801-7900, 7901-8000, 8001-8100, 8101-8200, 8201-8300, 8301-8400, 8401-8500, 8501-8600, 8601-8700, 8701-8800, 8801-8900, 8901-9000, 9001-9100, 9101-9200, 9201-9300, 9301-9400, 9401-9500, 9501-9600, 9601-9700, 9701-9800, 9801-9900, 9901-10000, 10001-10100, 10101-10200, 10201-10300, 10301-10400, 10401-10500, 10501-10600, 10601-10700, 10701-10800, 10801-10900, 10901-11000, 11001-11100, 11101-11200, 11201-11208

Web Access Statistics © 2003-2025 NAGRP - Bioinformatics Coordination Program.
Contact: NAGRP Bioinformatics Team
Helpdesk