Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 3001 - 3100:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig03001 ---NA--- 240 0     0      
contig03002 polymerase (dna-directed) delta interacting protein 2 610 20 8.34E-71 85.65% 3 F:protein binding, bridging; C:mitochondrion; C:nucleus    
contig03003 nadh dehydrogenase 1 beta subcomplex subunit mitochondrial precursor 599 20 1.81E-75 80.60% 5 P:transport; F:NADH dehydrogenase (ubiquinone) activity; C:mitochondrial respiratory chain complex I; P:ubiquinone biosynthetic process; P:mitochondrial electron transport, NADH to ubiquinone EC:1.6.5.3  
contig03004 ---NA--- 261 0     0      
contig03005 ubiquitin specific peptidase 37 627 20 7.02E-68 89.10% 5 P:ubiquitin-dependent protein catabolic process; F:ubiquitin thiolesterase activity; P:ubiquitin cycle; F:cysteine-type endopeptidase activity; C:nucleus EC:3.1.2.15; EC:3.4.22.0  
contig03006 oxidation resistance 1 255 1 6.70E-06 66.00% 0      
contig03007 ---NA--- 286 0     0      
contig03008 cullin 2 499 20 1.12E-88 95.25% 8 P:cell cycle arrest; P:ubiquitin-dependent protein catabolic process; C:cullin-RING ubiquitin ligase complex; F:ubiquitin protein ligase binding; P:negative regulation of cell proliferation; P:induction of apoptosis by intracellular signals; P:ubiquitin cycle; P:G1/S transition of mitotic cell cycle    
contig03009 ---NA--- 428 0     0      
contig03010 ---NA--- 100 0     0      
contig03011 ---NA--- 256 0     0      
contig03012 brix domain containing 5 565 20 1.07E-100 96.55% 3 C:nucleolus; P:rRNA processing; F:rRNA binding    
contig03013 swi snf matrix actin dependent regulator of subfamily a-like 1 335 20 2.56E-26 86.65% 8 P:DNA metabolic process; P:chromatin modification; P:regulation of transcription from RNA polymerase II promoter; F:DNA-dependent ATPase activity; F:DNA binding; F:DNA helicase activity; F:ATP binding; C:nucleus    
contig03014 exocyst complex component 3 240 20 6.78E-11 89.70% 5 P:exocytosis; P:P; P:protein transport; P:transport; C:C    
contig03015 ---NA--- 245 0     0      
contig03016 proteasome ( macropain) 26s 4 405 20 2.39E-56 96.60% 9 F:ATPase activity; F:protein binding; P:protein catabolic process; F:ATP binding; C:proteasome complex; P:proteolysis; C:nucleus; C:cytosol; P:blastocyst development    
contig03017 pleiotropic regulator 1 400 20 1.05E-51 72.15% 1 C:nucleus    
contig03018 ubiquitin-conjugating enzyme e2 variant 2 279 20 3.91E-35 94.35% 10 P:regulation of DNA repair; P:protein polyubiquitination; P:regulation of protein metabolic process; F:protein binding; C:UBC13-MMS2 complex; P:cell proliferation; C:cytoplasm; F:small conjugating protein ligase activity; P:DNA double-strand break processing; C:nucleus    
contig03019 thioredoxin-like 1 827 20 9.61E-113 90.40% 7 P:cell redox homeostasis; P:apoptosis; C:cytoplasm; F:thiol-disulfide exchange intermediate activity; P:signal transduction; F:electron carrier activity; P:transport    
contig03020 fgfr1 oncogene partner 2 1231 20 9.38E-93 90.40% 1 C:cytoplasm    
contig03021 fam32a-like 508 20 2.30E-36 85.30% 2 F:F; P:P    
contig03022 ---NA--- 382 0     0      
contig03023 coiled-coil domain containing 6 431 20 3.22E-61 96.50% 4 C:cytoskeleton; C:cytoplasm; F:protein binding; F:structural constituent of cytoskeleton    
contig03024 eomesodermin homolog 355 20 4.66E-52 79.40% 9 C:cytoplasm; P:determination of dorsal identity; F:DNA binding; F:protein binding; P:endoderm formation; P:cell migration involved in gastrulation; F:transcription activator activity; C:nucleus; P:regulation of transcription, DNA-dependent    
contig03025 leucine rich repeat containing 42 578 20 2.43E-34 59.70% 2 P:P; F:protein binding    
contig03026 ---NA--- 1054 0     0      
contig03027 protein tyrosine phosphatase- member a 240 20 1.61E-12 93.10% 4 F:protein tyrosine phosphatase activity; P:protein amino acid dephosphorylation; P:signal transduction; P:multicellular organismal development EC:3.1.3.48  
contig03028 ---NA--- 347 0     0      
contig03029 ---NA--- 314 0     0      
contig03030 ---NA--- 389 0     0      
contig03031 mgc69156 protein 255 20 4.17E-24 58.65% 2 F:RNA binding; F:binding    
contig03032 chromosome 9 open reading frame 82 369 20 1.03E-30 71.00% 0      
contig03033 ---NA--- 365 0     0      
contig03034 member ras oncogene family 537 20 5.77E-48 85.80% 5 C:Golgi membrane; C:endosome; F:GTP binding; P:small GTPase mediated signal transduction; P:protein transport    
contig03035 ---NA--- 294 0     0      
contig03036 ---NA--- 289 0     0      
contig03037 ---NA--- 233 0     0      
contig03038 ---NA--- 390 0     0      
contig03039 ---NA--- 262 0     0      
contig03040 hatching enzyme 463 20 1.47E-37 71.25% 2 F:metal ion binding; F:metallopeptidase activity    
contig03041 chromosome 1 open reading frame 83 311 20 1.65E-25 76.25% 7 P:RNA elongation; F:translation elongation factor activity; F:DNA binding; F:RNA polymerase II transcription factor activity; F:protein binding; C:nucleus; P:regulation of transcription, DNA-dependent    
contig03042 ---NA--- 265 0     0      
contig03043 ubiquitin carboxyl-terminal esterase l1 1387 20 2.98E-106 78.75% 17 C:cytosol; P:neuromuscular process; P:ubiquitin-dependent protein catabolic process; F:ubiquitin thiolesterase activity; F:omega peptidase activity; C:axon; P:axon transport of mitochondrion; P:eating behavior; C:neuronal cell body; F:ubiquitin binding; P:sensory perception of pain; F:cysteine-type endopeptidase activity; P:axon target recognition; P:protein deubiquitination; P:adult walking behavior; P:cell proliferation; P:response to stress EC:3.1.2.15; EC:3.4.19.0; EC:3.4.22.0  
contig03044 subfamily member 21 634 20 4.62E-46 73.30% 1 F:binding    
contig03045 cp13a_danre ame: full=upf0585 protein c16orf13 homolog a 359 4 1.32E-06 87.25% 2 F:F; P:P    
contig03046 ---NA--- 291 0     0      
contig03047 chibby homolog 1 248 20 8.73E-35 88.45% 9 F:beta-catenin binding; P:cardiac muscle cell differentiation; P:negative regulation of Wnt receptor signaling pathway; C:nuclear speck; F:identical protein binding; C:trans-Golgi network; P:negative regulation of transcription, DNA-dependent; P:protein localization; P:fat cell differentiation    
contig03048 small subunit processome homolog 465 20 1.53E-18 73.30% 2 F:F; P:P    
contig03049 t-complex 11 like 1 341 20 1.94E-26 65.35% 2 F:F; P:P    
contig03050 vacuolar atp synthase subunit e 1 744 20 6.80E-40 88.55% 9 F:hydrogen-exporting ATPase activity, phosphorylative mechanism; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; C:integral to membrane; C:membrane fraction; C:vacuolar membrane; F:ATP binding; P:ATP hydrolysis coupled proton transport; F:proton-transporting ATPase activity, rotational mechanism; C:proton-transporting two-sector ATPase complex EC:3.6.3.6; EC:3.6.3.14  
contig03051 ---NA--- 261 0     0      
contig03052 actin binding 1c 575 20 1.22E-62 93.15% 5 P:phagocytosis; F:actin binding; P:actin cortical patch assembly; P:signal transduction; C:actin cytoskeleton    
contig03053 ---NA--- 270 0     0      
contig03054 microtubule interacting and domain containing 1 310 20 1.40E-24 84.45% 2 P:protein transport; C:late endosome membrane    
contig03055 unnamed protein product [Tetraodon nigroviridis] 360 1 1.13E-04 72.00% 0      
contig03056 csrp2 binding protein 510 20 1.51E-75 86.85% 5 F:LIM domain binding; C:cytoplasm; P:metabolic process; F:N-acetyltransferase activity; C:nucleus    
contig03057 ndc80 kinetochore complex component 446 20 4.16E-16 64.60% 12 C:nucleus; P:mitosis; C:kinetochore; P:attachment of spindle microtubules to kinetochore; C:chromosome, centromeric region; C:cytoplasm; F:F; P:cell division; C:centrosome; P:chromosome segregation; F:protein binding; P:cell cycle    
contig03058 abhydrolase domain containing 5 509 20 9.97E-48 69.65% 6 P:lipid metabolic process; C:lipid particle; F:protein binding; C:cytosol; F:catalytic activity; P:positive regulation of lipoprotein lipase activity    
contig03059 sec61 alpha 639 20 2.06E-86 99.35% 5 P:intracellular protein transmembrane transport; C:endoplasmic reticulum membrane; F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity; C:membrane attack complex; P:protein secretion    
contig03060 pyrroline-5-carboxylate reductase-like 244 20 6.28E-33 76.70% 2 F:pyrroline-5-carboxylate reductase activity; P:cellular amino acid biosynthetic process EC:1.5.1.2  
contig03061 cysteinyl-trna synthetase 413 20 2.21E-62 90.15% 7 C:cytoplasm; C:soluble fraction; P:cysteinyl-tRNA aminoacylation; F:ATP binding; F:zinc ion binding; F:tRNA binding; F:cysteine-tRNA ligase activity EC:6.1.1.16  
contig03062 ---NA--- 392 0     0      
contig03063 nad dependent steroid dehydrogenase-like 695 20 6.32E-26 79.40% 7 F:binding; F:3-beta-hydroxy-delta5-steroid dehydrogenase activity; F:sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; P:hair follicle development; P:cholesterol biosynthetic process; C:integral to membrane; C:endoplasmic reticulum EC:1.1.1.145; EC:1.1.1.170  
contig03064 homologous-pairing protein 2 homolog 381 20 2.17E-41 87.15% 10 F:glucocorticoid receptor binding; F:DNA binding; P:meiosis; F:protein dimerization activity; P:positive regulation of transcription from RNA polymerase II promoter; F:thyroid hormone receptor binding; F:androgen receptor binding; C:nucleus; P:DNA recombination; F:estrogen receptor binding    
contig03065 ---NA--- 252 0     0      
contig03066 mgc82926 protein 333 20 9.37E-37 80.85% 0      
contig03067 ---NA--- 147 0     0      
contig03068 ---NA--- 275 0     0      
contig03069 zinc finger protein 518 4 9.74E-17 74.00% 0      
contig03070 ---NA--- 392 0     0      
contig03071 ---NA--- 532 0     0      
contig03072 mature t-cell proliferation 1 265 9 7.31E-13 78.22% 2 C:mitochondrion; P:cell proliferation    
contig03073 ---NA--- 210 0     0      
contig03074 ---NA--- 315 0     0      
contig03075 riken cdna 0610007c21 gene 258 20 8.20E-37 73.80% 1 C:integral to membrane    
contig03076 actin-related protein 2 3 complex subunit 3 370 20 2.53E-21 98.00% 3 C:cytoskeleton; P:regulation of actin filament polymerization; C:lamellipodium    
contig03077 ---NA--- 287 0     0      
contig03078 ---NA--- 248 0     0      
contig03079 adaptor-related protein complex sigma 1 subunit 383 20 1.12E-13 98.95% 10 F:protein transporter activity; P:embryonic development ending in birth or egg hatching; F:clathrin binding; P:clathrin coat assembly; P:protein complex assembly; P:nematode larval development; C:AP-2 adaptor complex; P:regulation of endocytosis; P:intracellular protein transport; C:AP-1 adaptor complex    
contig03080 heterogeneous nuclear ribonucleoprotein u 275 20 1.84E-16 90.55% 2 F:nucleic acid binding; C:ribonucleoprotein complex    
contig03081 vacuolar protein sorting 28 407 20 7.64E-71 99.15% 4 P:protein transport; C:cytosol; C:endosome; F:protein binding    
contig03082 non-smc condensin i subunit h 445 20 1.42E-48 70.80% 2 C:nucleus; P:mitotic chromosome condensation    
contig03083 ---NA--- 262 0     0      
contig03084 ---NA--- 290 0     0      
contig03085 nadh dehydrogenase 1 alpha 9kda 254 20 5.83E-34 80.20% 6 P:mitochondrial electron transport, NADH to ubiquinone; F:NADH dehydrogenase (ubiquinone) activity; P:electron transport; P:transport; C:mitochondrial respiratory chain complex I; C:integral to membrane EC:1.6.5.3  
contig03086 ---NA--- 253 0     0      
contig03087 ---NA--- 321 0     0      
contig03088 ---NA--- 414 0     0      
contig03089 aldehyde dehydrogenase 7 member a1 408 20 3.10E-64 96.50% 5 F:aldehyde dehydrogenase (NAD) activity; F:L-aminoadipate-semialdehyde dehydrogenase activity; C:mitochondrion; P:cellular aldehyde metabolic process; P:sensory perception of sound EC:1.2.1.3; EC:1.2.1.31  
contig03090 ---NA--- 342 0     0      
contig03091 protein phosphatase regulatory subunit b epsilon isoform 451 20 2.14E-81 98.30% 5 C:cytoplasm; C:protein phosphatase type 2A complex; P:signal transduction; F:binding; F:protein phosphatase type 2A regulator activity    
contig03092 ---NA--- 481 0     0      
contig03093 trna selenocysteine associated protein 1 200 20 1.99E-10 73.00% 8 F:nucleic acid binding; P:selenocysteine incorporation; F:RNA binding; P:translation; C:cytoplasm; F:nucleotide binding; F:protein binding; C:nucleus    
contig03094 ---NA--- 288 0     0      
contig03095 ---NA--- 267 0     0      
contig03096 chaperonin containing subunit 7 1041 20 2.47E-166 93.50% 5 P:protein folding; F:unfolded protein binding; F:ATP binding; F:identical protein binding; C:chaperonin-containing T-complex    
contig03097 sumo-1 activating enzyme subunit 2 653 20 3.48E-113 95.25% 7 F:ligase activity; F:small protein activating enzyme activity; F:enzyme activator activity; F:protein binding; P:ubiquitin cycle; F:ATP binding; C:nucleus    
contig03098 ---NA--- 281 0     0      
contig03099 ---NA--- 369 0     0      
contig03100 rad21 homolog 750 20 1.24E-113 94.25% 12 P:translation; C:ribosome; P:apoptosis; C:nuclear chromosome; F:calcium ion binding; P:mitotic sister chromatid cohesion; F:rRNA binding; P:double-strand break repair; F:structural constituent of ribosome; P:reciprocal meiotic recombination; P:cell division; F:protein binding EC:3.6.5.3  
100 Rows returned.
Go to records:
1-100, 101-200, 201-300, 301-400, 401-500, 501-600, 601-700, 701-800, 801-900, 901-1000, 1001-1100, 1101-1200, 1201-1300, 1301-1400, 1401-1500, 1501-1600, 1601-1700, 1701-1800, 1801-1900, 1901-2000, 2001-2100, 2101-2200, 2201-2300, 2301-2400, 2401-2500, 2501-2600, 2601-2700, 2701-2800, 2801-2900, 2901-3000, 3001-3100, 3101-3200, 3201-3300, 3301-3400, 3401-3500, 3501-3600, 3601-3700, 3701-3800, 3801-3900, 3901-4000, 4001-4100, 4101-4200, 4201-4300, 4301-4400, 4401-4500, 4501-4600, 4601-4700, 4701-4800, 4801-4900, 4901-5000, 5001-5100, 5101-5200, 5201-5300, 5301-5400, 5401-5500, 5501-5600, 5601-5700, 5701-5800, 5801-5900, 5901-6000, 6001-6100, 6101-6200, 6201-6300, 6301-6400, 6401-6500, 6501-6600, 6601-6700, 6701-6800, 6801-6900, 6901-7000, 7001-7100, 7101-7200, 7201-7300, 7301-7400, 7401-7500, 7501-7600, 7601-7700, 7701-7800, 7801-7900, 7901-8000, 8001-8100, 8101-8200, 8201-8300, 8301-8400, 8401-8500, 8501-8600, 8601-8700, 8701-8800, 8801-8900, 8901-9000, 9001-9100, 9101-9200, 9201-9300, 9301-9400, 9401-9500, 9501-9600, 9601-9700, 9701-9800, 9801-9900, 9901-10000, 10001-10100, 10101-10200, 10201-10300, 10301-10400, 10401-10500, 10501-10600, 10601-10700, 10701-10800, 10801-10900, 10901-11000, 11001-11100, 11101-11200, 11201-11208
Web Access Statistics © 2003-2025 NAGRP - Bioinformatics Coordination Program.
Contact: NAGRP Bioinformatics Team 		Helpdesk