Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 2901 - 3000:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig02901 zinc finger protein 300 289 7 1.59E-07 75.29% 0      
contig02902 ---NA--- 158 0     0      
contig02903 phd finger protein 10 235 20 3.59E-36 97.50% 6 F:protein binding; P:zinc ion transport; P:transcription antitermination; C:nucleus; F:zinc ion binding; P:regulation of transcription, DNA-dependent    
contig02904 ---NA--- 257 0     0      
contig02905 ---NA--- 404 0     0      
contig02906 zinc finger protein 593 839 20 6.09E-54 85.55% 3 F:zinc ion binding; F:nucleic acid binding; C:intracellular    
contig02907 ---NA--- 139 0     0      
contig02908 ---NA--- 118 0     0      
contig02909 n-acetyltransferase 5 479 20 9.65E-42 98.20% 3 C:intracellular; F:N-acetyltransferase activity; P:metabolic process    
contig02910 ---NA--- 248 0     0      
contig02911 ---NA--- 947 0     0      
contig02912 centrosomal protein 70 kda 274 20 1.45E-21 64.30% 1 C:centrosome    
contig02913 ---NA--- 233 0     0      
contig02914 ---NA--- 295 0     0      
contig02915 mitochondrial ribosomal protein s11 variant 1 440 20 2.45E-37 83.05% 3 C:ribosome; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig02916 cleavage and polyadenylation specific factor 5 398 20 2.17E-73 99.40% 9 C:paraspeckles; P:mRNA cleavage; F:RNA binding; P:ER-associated protein catabolic process; C:integral to endoplasmic reticulum membrane; C:centrosome; F:ubiquitin-protein ligase activity; F:protein binding; F:hydrolase activity EC:6.3.2.19  
contig02917 unnamed protein product [Tetraodon nigroviridis] 265 1 7.33E-05 86.00% 0      
contig02918 ---NA--- 695 0     0      
contig02919 histone acetyltransferase 1 449 20 6.54E-46 88.95% 7 C:cytoplasm; P:DNA packaging; F:protein binding; F:histone acetyltransferase activity; F:transaminase activity; P:internal protein amino acid acetylation; C:nucleus EC:2.3.1.48; EC:2.6.1.0  
contig02920 forkhead box m1 323 3 2.28E-14 69.33% 1 F:DNA binding    
contig02921 speckle-type poz 2031 20 0 95.35% 3 P:ubiquitin cycle; C:nucleus; F:protein binding    
contig02922 ---NA--- 314 0     0      
contig02923 protein vprbp (hiv-1 vpr-binding protein) (vpr-interacting protein) (ddb1- and cul4-associated factor 1) 597 20 2.57E-29 77.30% 3 F:binding; C:cytoplasm; P:ubiquitin cycle    
contig02924 ---NA--- 159 0     0      
contig02925 ---NA--- 368 0     0      
contig02926 rna (guanine-9-) methyltransferase domain containing 1 155 2 2.08E-07 66.00% 0      
contig02927 atp-binding sub-family f member 1 279 20 1.35E-27 93.55% 8 C:ribosome; F:translation factor activity, nucleic acid binding; P:inflammatory response; F:ATPase activity, coupled to transmembrane movement of substances; F:ribosomal small subunit binding; F:ATP binding; P:translation; F:ribosomal large subunit binding EC:3.6.5.3  
contig02928 ---NA--- 164 0     0      
contig02929 ---NA--- 288 0     0      
contig02930 ---NA--- 285 0     0      
contig02931 ---NA--- 275 0     0      
contig02932 ---NA--- 237 0     0      
contig02933 structure specific recognition protein 1 250 20 2.01E-31 88.00% 8 C:chromatin; P:DNA replication; F:transcription regulator activity; F:DNA binding; F:protein binding; C:nucleus; P:regulation of transcription, DNA-dependent; P:DNA repair    
contig02934 ---NA--- 316 0     0      
contig02935 ---NA--- 587 0     0      
contig02936 ---NA--- 499 0     0      
contig02937 ---NA--- 180 0     0      
contig02938 dna ligase i 250 20 6.48E-14 93.50% 10 P:V(D)J recombination; P:DNA replication; F:DNA binding; P:anatomical structure morphogenesis; P:cell cycle; F:ATP binding; C:nucleus; F:DNA ligase (ATP) activity; P:cell division; P:DNA repair EC:6.5.1.1  
contig02939 hydrolethalus syndrome protein 1 homolog 627 6 1.33E-42 66.00% 0      
contig02940 ---NA--- 300 0     0      
contig02941 synovial x breakpoint 2 interacting protein 950 20 1.48E-17 84.45% 7 P:actin cytoskeleton organization; C:protein complex; F:protein binding, bridging; C:cell-cell adherens junction; P:cell adhesion; C:nucleus; F:actinin binding    
contig02942 golgi reassembly stacking protein 2 465 20 3.72E-57 78.05% 3 C:membrane; C:Golgi medial cisterna; P:Golgi organization    
contig02943 ---NA--- 256 0     0      
contig02944 arachidonate 5-lipoxygenase 657 20 6.43E-38 51.10% 4 P:negative regulation of cellular process; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; P:leukotriene metabolic process; C:intracellular part EC:1.13.11.0  
contig02945 PREDICTED: similar to RGD1564982 (predicted) [Danio rerio] 356 2 5.20E-19 57.00% 0      
contig02946 1a1l1_fugru ame: full=1-aminocyclopropane-1-carboxylate synthase-like protein 1 short=acc synthase-like protein 488 4 1.17E-26 73.25% 4 F:transferase activity, transferring nitrogenous groups; F:pyridoxal phosphate binding; P:biosynthetic process; F:obs-aminocyclopropane-1-carboxylate synthase activity EC:4.4.1.14  
contig02947 chromosome 1 open reading frame 146 881 19 4.44E-42 68.95% 0      
contig02948 ---NA--- 427 0     0      
contig02949 nucleotide binding protein 2 ( coli) 258 20 3.17E-40 91.30% 2 F:ATP binding; C:nucleus    
contig02950 unnamed protein product [Tetraodon nigroviridis] 275 1 1.56E-07 91.00% 0      
contig02951 glutamyl-trna synthetase 2 562 20 1.39E-84 84.90% 4 F:glutamate-tRNA ligase activity; P:glutamyl-tRNA aminoacylation; C:mitochondrial matrix; F:ATP binding EC:6.1.1.17  
contig02952 ---NA--- 256 0     0      
contig02953 ---NA--- 256 0     0      
contig02954 ---NA--- 288 0     0      
contig02955 zinc finger 208 14 4.69E-12 81.50% 0      
contig02956 ---NA--- 222 0     0      
contig02957 pwp2 periodic tryptophan protein homolog 459 20 9.59E-50 88.15% 6 F:metal ion binding; F:serine-type endopeptidase activity; F:signal transducer activity; P:signal transduction; P:proteolysis; C:nucleus EC:3.4.21.0  
contig02958 ---NA--- 473 0     0      
contig02959 ---NA--- 417 0     0      
contig02960 heat shock factor 2 772 20 3.25E-21 61.10% 4 C:cytoplasm; F:sequence-specific DNA binding; P:regulation of transcription; C:nucleus    
contig02961 ---NA--- 520 0     0      
contig02962 ---NA--- 253 0     0      
contig02963 cyclin-dependent kinase 6 260 20 2.87E-41 94.70% 19 P:positive regulation of fibroblast proliferation; C:ruffle; P:regulation of cell cycle; P:positive regulation of cell-matrix adhesion; C:cyclin-dependent protein kinase holoenzyme complex; P:negative regulation of epithelial cell proliferation; P:regulation of gene expression; P:negative regulation of osteoblast differentiation; P:cell division; F:ATP binding; P:G1 phase of mitotic cell cycle; P:regulation of erythrocyte differentiation; P:cell dedifferentiation; P:gliogenesis; F:cyclin-dependent protein kinase activity; C:cytoplasm; F:cyclin binding; C:nucleus; P:protein amino acid phosphorylation EC:2.7.11.22  
contig02964 ---NA--- 660 0     0      
contig02965 m-phase phosphoprotein 1 440 20 3.22E-13 53.90% 6 F:binding; C:microtubule cytoskeleton; P:cell cycle; C:nuclear lumen; C:cytoplasm; C:cytoskeletal part    
contig02966 ---NA--- 299 0     0      
contig02967 rod1 regulator of differentiation 1 ( pombe) 255 20 6.41E-41 85.90% 5 F:RNA binding; C:ribonucleoprotein complex; P:mRNA processing; C:nucleus; F:nucleotide binding    
contig02968 argininosuccinate synthetase 1 944 20 1.86E-97 87.15% 6 P:arginine biosynthetic process; P:urea cycle; F:protein binding; F:ATP binding; F:argininosuccinate synthase activity; C:mitochondrion EC:6.3.4.5  
contig02969 ---NA--- 290 0     0      
contig02970 ---NA--- 999 0     0      
contig02971 unnamed protein product [Tetraodon nigroviridis] 457 2 4.22E-21 62.00% 0      
contig02972 ---NA--- 451 0     0      
contig02973 methionine aminopeptidase 1d 556 20 6.01E-85 83.65% 9 P:cobalt ion transport; F:cobalt ion binding; F:cobalt ion transmembrane transporter activity; P:N-terminal protein amino acid modification; F:methionyl aminopeptidase activity; P:peptidyl-methionine modification; P:proteolysis; F:endopeptidase inhibitor activity; C:mitochondrion EC:3.4.11.18  
contig02974 propionyl coenzyme a beta polypeptide 904 20 6.51E-161 96.95% 2 C:mitochondrial matrix; F:propionyl-CoA carboxylase activity EC:6.4.1.3  
contig02975 nmda receptor regulated 1 539 20 4.73E-36 79.90% 7 C:cytoplasm; F:receptor activity; P:angiogenesis; P:cell differentiation; F:N-acetyltransferase activity; F:protein binding; P:regulation of transcription, DNA-dependent    
contig02976 pre-mrna cleavage complex ii protein pcf11 677 20 1.81E-30 72.15% 2 C:mRNA cleavage factor complex; P:mRNA cleavage    
contig02977 ---NA--- 552 0     0      
contig02978 cylindromatosis (turban tumor syndrome) 515 20 8.30E-29 67.90% 9 F:structural constituent of ribosome; F:ubiquitin thiolesterase activity; P:translation; C:ribosome; C:C; P:ubiquitin-dependent protein catabolic process; C:intracellular; F:protein binding; P:P    
contig02979 forkhead box k2 336 20 2.72E-28 77.80% 6 P:regulation of transcription from RNA polymerase II promoter; F:sequence-specific DNA binding; F:RNA polymerase II transcription factor activity; F:magnesium ion binding; F:transcription factor activity; C:nucleus    
contig02980 voltage-dependent anion channel 2 417 20 2.50E-69 91.65% 4 P:anion transport; F:voltage-gated anion channel activity; C:membrane attack complex; C:mitochondrial outer membrane    
contig02981 syntaxin binding protein 3 422 20 1.75E-22 83.90% 7 P:protein heterooligomerization; C:plasma membrane; P:vesicle docking during exocytosis; F:syntaxin-1 binding; C:cytosol; P:glucose transport; P:protein transport    
contig02982 apurinic apyrimidinic endonuclease 1 248 6 5.70E-10 89.00% 6 F:endonuclease activity; P:heart looping; F:DNA binding; P:heart contraction; P:negative regulation of apoptosis; P:DNA repair    
contig02983 ---NA--- 374 0     0      
contig02984 ---NA--- 799 0     0      
contig02985 testis enhanced gene transcript (bax inhibitor 1) 737 20 2.97E-88 87.65% 6 P:spermatogenesis; C:integral to plasma membrane; C:insoluble fraction; C:nucleus; P:negative regulation of apoptosis; C:endoplasmic reticulum    
contig02986 translocase of inner mitochondrial membrane 50 homolog 665 20 4.14E-109 94.10% 12 P:release of cytochrome c from mitochondria; P:protein amino acid dephosphorylation; F:RNA binding; F:ribonucleoprotein binding; C:mitochondrial inner membrane presequence translocase complex; P:mitochondrial membrane organization; C:nuclear speck; F:protein serine/threonine phosphatase activity; F:protein tyrosine phosphatase activity; C:membrane attack complex; P:intracellular protein transmembrane transport; F:interleukin-2 receptor binding EC:3.1.3.48  
contig02987 ---NA--- 297 0     0      
contig02988 ---NA--- 592 0     0      
contig02989 methyltransferase like 1 1232 20 2.76E-96 82.60% 2 F:tRNA (guanine-N7-)-methyltransferase activity; P:tRNA modification EC:2.1.1.33  
contig02990 ---NA--- 537 0     0      
contig02991 nck adaptor protein 2 265 20 2.76E-36 85.55% 14 C:vesicle membrane; P:positive regulation of T cell proliferation; F:receptor signaling complex scaffold activity; P:negative regulation of cell proliferation; P:actin filament organization; ; P:regulation of translation; P:signal complex assembly; P:regulation of epidermal growth factor receptor activity; P:lamellipodium assembly; P:positive regulation of actin filament polymerization; C:endoplasmic reticulum; P:cell migration; F:cytoskeletal adaptor activity    
contig02992 ---NA--- 332 0     0      
contig02993 ribonuclease p mrp 38 subunit 326 20 1.68E-25 69.60% 6 C:ribosome; F:structural constituent of ribosome; F:protein binding; C:nucleolar ribonuclease P complex; F:ribonuclease P activity; P:translation EC:3.1.26.5; EC:3.6.5.3  
contig02994 sentrin-specific protease 8 332 2 4.55E-07 85.00% 2 P:proteolysis; C:C    
contig02995 ---NA--- 253 0     0      
contig02996 ---NA--- 527 0     0      
contig02997 coiled-coil-helix-coiled-coil-helix domain containing 8 503 20 3.74E-23 73.90% 2 F:F; P:P    
contig02998 ---NA--- 942 0     0      
contig02999 serologically defined colon cancer antigen 1 250 20 6.48E-14 95.25% 1 C:nucleus    
contig03000 ---NA--- 241 0     0      
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